RNA–Protein interactions for RNA: ENST00000488773.1

SFT2D1-205, Transcript of SFT2 domain containing 1, humanhuman

TSL 5

Gene SFT2D1, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-205ENST00000488773 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.19
SFT2D1-205ENST00000488773 ABCC9O60706 1549 aa13.15□□□□□ -0.3
SFT2D1-205ENST00000488773 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
SFT2D1-205ENST00000488773 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
SFT2D1-205ENST00000488773 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
SFT2D1-205ENST00000488773 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
SFT2D1-205ENST00000488773 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
SFT2D1-205ENST00000488773 NACADO15069 1562 aa12.05□□□□□ -0.48
SFT2D1-205ENST00000488773 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
SFT2D1-205ENST00000488773 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
SFT2D1-205ENST00000488773 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
SFT2D1-205ENST00000488773 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
SFT2D1-205ENST00000488773 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
SFT2D1-205ENST00000488773 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.53
SFT2D1-205ENST00000488773 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
SFT2D1-205ENST00000488773 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
SFT2D1-205ENST00000488773 AEBP2Q6ZN18 517 aaPredicted RBP11.55□□□□□ -0.56
SFT2D1-205ENST00000488773 SCRIBQ14160 1630 aa11.52□□□□□ -0.57
SFT2D1-205ENST00000488773 CUX2O14529 1486 aa11.48□□□□□ -0.57
SFT2D1-205ENST00000488773 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
SFT2D1-205ENST00000488773 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
SFT2D1-205ENST00000488773 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.59
SFT2D1-205ENST00000488773 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
SFT2D1-205ENST00000488773 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
SFT2D1-205ENST00000488773 NESP48681 1621 aa11.16□□□□□ -0.62
SFT2D1-205ENST00000488773 ATAD2BQ9ULI0 1458 aa11.07□□□□□ -0.64
SFT2D1-205ENST00000488773 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
SFT2D1-205ENST00000488773 SMARCA2P51531 1590 aa11.02□□□□□ -0.65
SFT2D1-205ENST00000488773 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
SFT2D1-205ENST00000488773 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
SFT2D1-205ENST00000488773 PDS5BQ9NTI5 1447 aa10.99□□□□□ -0.65
SFT2D1-205ENST00000488773 BAZ1BQ9UIG0 1483 aaKnown RBP10.95□□□□□ -0.66
SFT2D1-205ENST00000488773 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
SFT2D1-205ENST00000488773 SMARCA4P51532 1647 aa10.91□□□□□ -0.66
SFT2D1-205ENST00000488773 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
SFT2D1-205ENST00000488773 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
SFT2D1-205ENST00000488773 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
SFT2D1-205ENST00000488773 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
SFT2D1-205ENST00000488773 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
SFT2D1-205ENST00000488773 WDR62O43379 1518 aa10.82□□□□□ -0.68
SFT2D1-205ENST00000488773 CHIC1Q5VXU3 224 aa10.78□□□□□ -0.68
SFT2D1-205ENST00000488773 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
SFT2D1-205ENST00000488773 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.69
SFT2D1-205ENST00000488773 RIMBP3CA6NJZ7 1639 aa10.76□□□□□ -0.69
SFT2D1-205ENST00000488773 RIMBP3BA6NNM3 1639 aa10.76□□□□□ -0.69
SFT2D1-205ENST00000488773 RIMBP3Q9UFD9 1639 aa10.76□□□□□ -0.69
SFT2D1-205ENST00000488773 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
SFT2D1-205ENST00000488773 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
SFT2D1-205ENST00000488773 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.69
SFT2D1-205ENST00000488773 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
SFT2D1-205ENST00000488773 URB2Q14146 1524 aaKnown RBP10.62□□□□□ -0.71
SFT2D1-205ENST00000488773 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
SFT2D1-205ENST00000488773 FBLN2P98095 1184 aa10.59□□□□□ -0.71
SFT2D1-205ENST00000488773 CFTRP13569 1480 aa10.59□□□□□ -0.71
SFT2D1-205ENST00000488773 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
SFT2D1-205ENST00000488773 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
SFT2D1-205ENST00000488773 WIZO95785 1651 aa10.53□□□□□ -0.72
SFT2D1-205ENST00000488773 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
SFT2D1-205ENST00000488773 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.731e-13■■■■■ 33.4
SFT2D1-205ENST00000488773 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
SFT2D1-205ENST00000488773 TOPBP1Q92547 1522 aa10.43□□□□□ -0.74
SFT2D1-205ENST00000488773 CHD1O14646 1710 aa10.42□□□□□ -0.74
SFT2D1-205ENST00000488773 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
SFT2D1-205ENST00000488773 CHMP7Q8WUX9 453 aaPredicted RBP10.41□□□□□ -0.74
SFT2D1-205ENST00000488773 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
SFT2D1-205ENST00000488773 TOP2AP11388 1531 aaKnown RBP10.37□□□□□ -0.75
SFT2D1-205ENST00000488773 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
SFT2D1-205ENST00000488773 DNMBPQ6XZF7 1577 aa10.33□□□□□ -0.76
SFT2D1-205ENST00000488773 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
SFT2D1-205ENST00000488773 CLASP1Q7Z460 1538 aa10.32□□□□□ -0.76
SFT2D1-205ENST00000488773 CCDC88BA6NC98 1476 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 SOGA1O94964 1423 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
SFT2D1-205ENST00000488773 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
SFT2D1-205ENST00000488773 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
SFT2D1-205ENST00000488773 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
SFT2D1-205ENST00000488773 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
SFT2D1-205ENST00000488773 KDM4FA0A1W2PPD8 638 aa10.23□□□□□ -0.77
SFT2D1-205ENST00000488773 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
SFT2D1-205ENST00000488773 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
SFT2D1-205ENST00000488773 FGD5Q6ZNL6 1462 aa10.18□□□□□ -0.78
SFT2D1-205ENST00000488773 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
SFT2D1-205ENST00000488773 ERCC6L2Q5T890 1561 aa10.16□□□□□ -0.78
SFT2D1-205ENST00000488773 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
SFT2D1-205ENST00000488773 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
SFT2D1-205ENST00000488773 CUX1P39880 1505 aa10.08□□□□□ -0.8
SFT2D1-205ENST00000488773 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
SFT2D1-205ENST00000488773 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
SFT2D1-205ENST00000488773 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
SFT2D1-205ENST00000488773 KDM6BO15054 1643 aa10.05□□□□□ -0.8
SFT2D1-205ENST00000488773 JPH4Q96JJ6 628 aa10.05□□□□□ -0.8
SFT2D1-205ENST00000488773 NUP160Q12769 1436 aa10.05□□□□□ -0.8
SFT2D1-205ENST00000488773 PRG4Q92954 1404 aaPredicted RBP10.05□□□□□ -0.8
SFT2D1-205ENST00000488773 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
SFT2D1-205ENST00000488773 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.8
SFT2D1-205ENST00000488773 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
SFT2D1-205ENST00000488773 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms