RNA–Protein interactions for RNA: ENST00000389879.9

CCNK-201, Transcript of cyclin K, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCNK, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-201ENST00000389879 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.61
CCNK-201ENST00000389879 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
CCNK-201ENST00000389879 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
CCNK-201ENST00000389879 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
CCNK-201ENST00000389879 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
CCNK-201ENST00000389879 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
CCNK-201ENST00000389879 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
CCNK-201ENST00000389879 DCAF8L2P0C7V8 631 aa15.28■□□□□ 0.04
CCNK-201ENST00000389879 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
CCNK-201ENST00000389879 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
CCNK-201ENST00000389879 NACADO15069 1562 aa15.11■□□□□ 0.01
CCNK-201ENST00000389879 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CCNK-201ENST00000389879 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
CCNK-201ENST00000389879 HRCP23327 699 aa15□□□□□ -0.01
CCNK-201ENST00000389879 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
CCNK-201ENST00000389879 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
CCNK-201ENST00000389879 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
CCNK-201ENST00000389879 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
CCNK-201ENST00000389879 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
CCNK-201ENST00000389879 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
CCNK-201ENST00000389879 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
CCNK-201ENST00000389879 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
CCNK-201ENST00000389879 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
CCNK-201ENST00000389879 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
CCNK-201ENST00000389879 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
CCNK-201ENST00000389879 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
CCNK-201ENST00000389879 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
CCNK-201ENST00000389879 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
CCNK-201ENST00000389879 MYT1Q01538 1121 aa14.41□□□□□ -0.1
CCNK-201ENST00000389879 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
CCNK-201ENST00000389879 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
CCNK-201ENST00000389879 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
CCNK-201ENST00000389879 WIZO95785 1651 aa14.36□□□□□ -0.11
CCNK-201ENST00000389879 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
CCNK-201ENST00000389879 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
CCNK-201ENST00000389879 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
CCNK-201ENST00000389879 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
CCNK-201ENST00000389879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.14
CCNK-201ENST00000389879 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
CCNK-201ENST00000389879 YTHDC1Q96MU7 727 aaKnown RBP14.16□□□□□ -0.14
CCNK-201ENST00000389879 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
CCNK-201ENST00000389879 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
CCNK-201ENST00000389879 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
CCNK-201ENST00000389879 NEUROD1Q13562 356 aa14.04□□□□□ -0.16
CCNK-201ENST00000389879 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
CCNK-201ENST00000389879 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
CCNK-201ENST00000389879 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
CCNK-201ENST00000389879 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
CCNK-201ENST00000389879 EEA1Q15075 1411 aa13.96□□□□□ -0.17
CCNK-201ENST00000389879 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
CCNK-201ENST00000389879 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
CCNK-201ENST00000389879 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
CCNK-201ENST00000389879 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
CCNK-201ENST00000389879 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
CCNK-201ENST00000389879 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CCNK-201ENST00000389879 KIF21BO75037 1637 aa13.84□□□□□ -0.19
CCNK-201ENST00000389879 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
CCNK-201ENST00000389879 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
CCNK-201ENST00000389879 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
CCNK-201ENST00000389879 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
CCNK-201ENST00000389879 APLP2Q06481 763 aa13.78□□□□□ -0.2
CCNK-201ENST00000389879 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CCNK-201ENST00000389879 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
CCNK-201ENST00000389879 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
CCNK-201ENST00000389879 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
CCNK-201ENST00000389879 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
CCNK-201ENST00000389879 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
CCNK-201ENST00000389879 CFTRP13569 1480 aa13.65□□□□□ -0.22
CCNK-201ENST00000389879 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
CCNK-201ENST00000389879 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
CCNK-201ENST00000389879 MIER1Q8N108 512 aa13.6□□□□□ -0.23
CCNK-201ENST00000389879 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
CCNK-201ENST00000389879 SOGA1O94964 1423 aa13.57□□□□□ -0.24
CCNK-201ENST00000389879 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCNK-201ENST00000389879 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
CCNK-201ENST00000389879 CUX1P39880 1505 aa13.52□□□□□ -0.24
CCNK-201ENST00000389879 PRXQ9BXM0 1461 aa13.52□□□□□ -0.25
CCNK-201ENST00000389879 BCANQ96GW7 911 aa13.51□□□□□ -0.25
CCNK-201ENST00000389879 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
CCNK-201ENST00000389879 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
CCNK-201ENST00000389879 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
CCNK-201ENST00000389879 ITGAEP38570 1179 aa13.45□□□□□ -0.26
CCNK-201ENST00000389879 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
CCNK-201ENST00000389879 DAXXQ9UER7 740 aaPredicted RBP13.43□□□□□ -0.26
CCNK-201ENST00000389879 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
CCNK-201ENST00000389879 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
CCNK-201ENST00000389879 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
CCNK-201ENST00000389879 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
CCNK-201ENST00000389879 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
CCNK-201ENST00000389879 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
CCNK-201ENST00000389879 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
CCNK-201ENST00000389879 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
CCNK-201ENST00000389879 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
CCNK-201ENST00000389879 CUL7Q14999 1698 aa13.31□□□□□ -0.28
CCNK-201ENST00000389879 CLIP1P30622 1438 aa13.28□□□□□ -0.28
CCNK-201ENST00000389879 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
CCNK-201ENST00000389879 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
CCNK-201ENST00000389879 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
CCNK-201ENST00000389879 HIRIP3Q9BW71 556 aaPredicted RBP13.24□□□□□ -0.29
CCNK-201ENST00000389879 CUX2O14529 1486 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms