RNA–Protein interactions for RNA: ENST00000473699.5

SSR2-207, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-207ENST00000473699 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
SSR2-207ENST00000473699 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
SSR2-207ENST00000473699 ABCC9O60706 1549 aa32.64■■■□□ 2.82
SSR2-207ENST00000473699 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
SSR2-207ENST00000473699 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
SSR2-207ENST00000473699 NACADO15069 1562 aa31.31■■■□□ 2.6
SSR2-207ENST00000473699 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
SSR2-207ENST00000473699 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
SSR2-207ENST00000473699 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
SSR2-207ENST00000473699 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
SSR2-207ENST00000473699 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
SSR2-207ENST00000473699 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
SSR2-207ENST00000473699 BICRAQ9NZM4 1560 aa30.35■■■□□ 2.45
SSR2-207ENST00000473699 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.4
SSR2-207ENST00000473699 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
SSR2-207ENST00000473699 EIF4G1Q04637 1599 aaKnown RBP29.58■■■□□ 2.33
SSR2-207ENST00000473699 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
SSR2-207ENST00000473699 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
SSR2-207ENST00000473699 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
SSR2-207ENST00000473699 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
SSR2-207ENST00000473699 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
SSR2-207ENST00000473699 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
SSR2-207ENST00000473699 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
SSR2-207ENST00000473699 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
SSR2-207ENST00000473699 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
SSR2-207ENST00000473699 HMGXB3Q12766 1538 aa28.7■■■□□ 2.19
SSR2-207ENST00000473699 BAZ1BQ9UIG0 1483 aaKnown RBP28.69■■■□□ 2.18
SSR2-207ENST00000473699 WIZO95785 1651 aa28.56■■■□□ 2.16
SSR2-207ENST00000473699 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
SSR2-207ENST00000473699 TOP2AP11388 1531 aaKnown RBP28.22■■■□□ 2.11
SSR2-207ENST00000473699 NESP48681 1621 aa28.21■■■□□ 2.11
SSR2-207ENST00000473699 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
SSR2-207ENST00000473699 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
SSR2-207ENST00000473699 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
SSR2-207ENST00000473699 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
SSR2-207ENST00000473699 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
SSR2-207ENST00000473699 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
SSR2-207ENST00000473699 CFTRP13569 1480 aa27.87■■■□□ 2.05
SSR2-207ENST00000473699 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
SSR2-207ENST00000473699 CUX2O14529 1486 aa27.81■■■□□ 2.04
SSR2-207ENST00000473699 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
SSR2-207ENST00000473699 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
SSR2-207ENST00000473699 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
SSR2-207ENST00000473699 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
SSR2-207ENST00000473699 PRDM2Q13029 1718 aa27.64■■■□□ 2.02
SSR2-207ENST00000473699 WDR62O43379 1518 aa27.52■■■□□ 2
SSR2-207ENST00000473699 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
SSR2-207ENST00000473699 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
SSR2-207ENST00000473699 TOPBP1Q92547 1522 aa27.29■■□□□ 1.96
SSR2-207ENST00000473699 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
SSR2-207ENST00000473699 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
SSR2-207ENST00000473699 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
SSR2-207ENST00000473699 CUX1P39880 1505 aa27.06■■□□□ 1.92
SSR2-207ENST00000473699 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
SSR2-207ENST00000473699 SOGA1O94964 1423 aa27.02■■□□□ 1.92
SSR2-207ENST00000473699 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
SSR2-207ENST00000473699 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
SSR2-207ENST00000473699 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
SSR2-207ENST00000473699 TARBP1Q13395 1621 aaKnown RBP26.96■■□□□ 1.91
SSR2-207ENST00000473699 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
SSR2-207ENST00000473699 AQRO60306 1485 aaKnown RBP eCLIP26.89■■□□□ 1.9
SSR2-207ENST00000473699 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
SSR2-207ENST00000473699 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
SSR2-207ENST00000473699 TOP2BQ02880 1626 aa26.83■■□□□ 1.88
SSR2-207ENST00000473699 BIVM-ERCC5R4GMW8 1640 aa26.81■■□□□ 1.88
SSR2-207ENST00000473699 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
SSR2-207ENST00000473699 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
SSR2-207ENST00000473699 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
SSR2-207ENST00000473699 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
SSR2-207ENST00000473699 FBLN2P98095 1184 aa26.7■■□□□ 1.86
SSR2-207ENST00000473699 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
SSR2-207ENST00000473699 GRIN2BQ13224 1484 aa26.66■■□□□ 1.86
SSR2-207ENST00000473699 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
SSR2-207ENST00000473699 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
SSR2-207ENST00000473699 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
SSR2-207ENST00000473699 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
SSR2-207ENST00000473699 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
SSR2-207ENST00000473699 CHD1O14646 1710 aa26.56■■□□□ 1.84
SSR2-207ENST00000473699 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
SSR2-207ENST00000473699 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
SSR2-207ENST00000473699 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
SSR2-207ENST00000473699 KIF27Q86VH2 1401 aa26.39■■□□□ 1.81
SSR2-207ENST00000473699 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
SSR2-207ENST00000473699 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
SSR2-207ENST00000473699 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
SSR2-207ENST00000473699 IGF1RP08069 1367 aa26.28■■□□□ 1.8
SSR2-207ENST00000473699 RIMBP3CA6NJZ7 1639 aa26.24■■□□□ 1.79
SSR2-207ENST00000473699 RIMBP3BA6NNM3 1639 aa26.24■■□□□ 1.79
SSR2-207ENST00000473699 RIMBP3Q9UFD9 1639 aa26.24■■□□□ 1.79
SSR2-207ENST00000473699 ARHGEF11O15085 1522 aa26.22■■□□□ 1.79
SSR2-207ENST00000473699 CLASP1Q7Z460 1538 aa26.22■■□□□ 1.79
SSR2-207ENST00000473699 CUL7Q14999 1698 aa26.16■■□□□ 1.78
SSR2-207ENST00000473699 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
SSR2-207ENST00000473699 NUP160Q12769 1436 aa26.14■■□□□ 1.78
SSR2-207ENST00000473699 CEP170Q5SW79 1584 aa26.13■■□□□ 1.77
SSR2-207ENST00000473699 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
SSR2-207ENST00000473699 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
SSR2-207ENST00000473699 JPH4Q96JJ6 628 aa26.03■■□□□ 1.76
SSR2-207ENST00000473699 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
SSR2-207ENST00000473699 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms