RNA–Protein interactions for RNA: ENST00000396307.6

RAB27A-202, Transcript of RAB27A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB27A, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27A-202ENST00000396307 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
RAB27A-202ENST00000396307 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.48
RAB27A-202ENST00000396307 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
RAB27A-202ENST00000396307 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.31
RAB27A-202ENST00000396307 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
RAB27A-202ENST00000396307 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
RAB27A-202ENST00000396307 NACADO15069 1562 aa16.26■□□□□ 0.19
RAB27A-202ENST00000396307 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
RAB27A-202ENST00000396307 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
RAB27A-202ENST00000396307 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
RAB27A-202ENST00000396307 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
RAB27A-202ENST00000396307 ABCC9O60706 1549 aa15.61■□□□□ 0.09
RAB27A-202ENST00000396307 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
RAB27A-202ENST00000396307 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
RAB27A-202ENST00000396307 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
RAB27A-202ENST00000396307 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
RAB27A-202ENST00000396307 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
RAB27A-202ENST00000396307 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
RAB27A-202ENST00000396307 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
RAB27A-202ENST00000396307 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
RAB27A-202ENST00000396307 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
RAB27A-202ENST00000396307 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
RAB27A-202ENST00000396307 WIZO95785 1651 aa14.74□□□□□ -0.05
RAB27A-202ENST00000396307 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
RAB27A-202ENST00000396307 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
RAB27A-202ENST00000396307 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
RAB27A-202ENST00000396307 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
RAB27A-202ENST00000396307 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
RAB27A-202ENST00000396307 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
RAB27A-202ENST00000396307 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
RAB27A-202ENST00000396307 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
RAB27A-202ENST00000396307 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
RAB27A-202ENST00000396307 CFTRP13569 1480 aa14.31□□□□□ -0.12
RAB27A-202ENST00000396307 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
RAB27A-202ENST00000396307 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
RAB27A-202ENST00000396307 WDR62O43379 1518 aa14.25□□□□□ -0.13
RAB27A-202ENST00000396307 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
RAB27A-202ENST00000396307 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
RAB27A-202ENST00000396307 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
RAB27A-202ENST00000396307 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
RAB27A-202ENST00000396307 BAZ1BQ9UIG0 1483 aaKnown RBP14.13□□□□□ -0.15
RAB27A-202ENST00000396307 CUX2O14529 1486 aa14.08□□□□□ -0.16
RAB27A-202ENST00000396307 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
RAB27A-202ENST00000396307 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
RAB27A-202ENST00000396307 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
RAB27A-202ENST00000396307 PBRM1Q86U86 1689 aa14.02□□□□□ -0.17
RAB27A-202ENST00000396307 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
RAB27A-202ENST00000396307 CUX1P39880 1505 aa13.95□□□□□ -0.18
RAB27A-202ENST00000396307 PCGF6Q9BYE7 350 aa13.94□□□□□ -0.18
RAB27A-202ENST00000396307 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
RAB27A-202ENST00000396307 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
RAB27A-202ENST00000396307 KIF21BO75037 1637 aa13.9□□□□□ -0.18
RAB27A-202ENST00000396307 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
RAB27A-202ENST00000396307 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
RAB27A-202ENST00000396307 CUL7Q14999 1698 aa13.88□□□□□ -0.19
RAB27A-202ENST00000396307 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
RAB27A-202ENST00000396307 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.19
RAB27A-202ENST00000396307 HRCP23327 699 aa13.83□□□□□ -0.2
RAB27A-202ENST00000396307 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
RAB27A-202ENST00000396307 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
RAB27A-202ENST00000396307 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
RAB27A-202ENST00000396307 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
RAB27A-202ENST00000396307 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
RAB27A-202ENST00000396307 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
RAB27A-202ENST00000396307 MYT1Q01538 1121 aa13.73□□□□□ -0.21
RAB27A-202ENST00000396307 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
RAB27A-202ENST00000396307 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
RAB27A-202ENST00000396307 SAMD9Q5K651 1589 aa13.7□□□□□ -0.22
RAB27A-202ENST00000396307 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
RAB27A-202ENST00000396307 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
RAB27A-202ENST00000396307 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
RAB27A-202ENST00000396307 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
RAB27A-202ENST00000396307 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
RAB27A-202ENST00000396307 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
RAB27A-202ENST00000396307 NESP48681 1621 aa13.58□□□□□ -0.24
RAB27A-202ENST00000396307 CHIC1Q5VXU3 224 aa13.58□□□□□ -0.24
RAB27A-202ENST00000396307 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
RAB27A-202ENST00000396307 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
RAB27A-202ENST00000396307 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
RAB27A-202ENST00000396307 PRKCSHP14314 528 aaPredicted RBP13.57□□□□□ -0.24
RAB27A-202ENST00000396307 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
RAB27A-202ENST00000396307 CHD1O14646 1710 aa13.52□□□□□ -0.24
RAB27A-202ENST00000396307 IFT140Q96RY7 1462 aa13.52□□□□□ -0.24
RAB27A-202ENST00000396307 EEA1Q15075 1411 aa13.52□□□□□ -0.24
RAB27A-202ENST00000396307 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
RAB27A-202ENST00000396307 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.25
RAB27A-202ENST00000396307 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
RAB27A-202ENST00000396307 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
RAB27A-202ENST00000396307 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
RAB27A-202ENST00000396307 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
RAB27A-202ENST00000396307 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
RAB27A-202ENST00000396307 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
RAB27A-202ENST00000396307 CEP170Q5SW79 1584 aa13.4□□□□□ -0.27
RAB27A-202ENST00000396307 NUP160Q12769 1436 aa13.38□□□□□ -0.27
RAB27A-202ENST00000396307 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
RAB27A-202ENST00000396307 EFCAB5A4FU69 1503 aa13.33□□□□□ -0.28
RAB27A-202ENST00000396307 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
RAB27A-202ENST00000396307 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
RAB27A-202ENST00000396307 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
RAB27A-202ENST00000396307 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms