RNA–Protein interactions for RNA: ENST00000480640.1

LAMB2-209, Transcript of laminin subunit beta 2, humanhuman

TSL 3

Gene LAMB2, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-209ENST00000480640 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
LAMB2-209ENST00000480640 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
LAMB2-209ENST00000480640 ABCC9O60706 1549 aa32.87■■■□□ 2.85
LAMB2-209ENST00000480640 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
LAMB2-209ENST00000480640 NACADO15069 1562 aa31.2■■■□□ 2.58
LAMB2-209ENST00000480640 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
LAMB2-209ENST00000480640 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
LAMB2-209ENST00000480640 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
LAMB2-209ENST00000480640 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
LAMB2-209ENST00000480640 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.49
LAMB2-209ENST00000480640 DCAF1Q9Y4B6 1507 aa30.53■■■□□ 2.48
LAMB2-209ENST00000480640 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
LAMB2-209ENST00000480640 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
LAMB2-209ENST00000480640 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
LAMB2-209ENST00000480640 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
LAMB2-209ENST00000480640 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
LAMB2-209ENST00000480640 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
LAMB2-209ENST00000480640 CECR2Q9BXF3 1484 aa29.56■■■□□ 2.32
LAMB2-209ENST00000480640 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
LAMB2-209ENST00000480640 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
LAMB2-209ENST00000480640 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
LAMB2-209ENST00000480640 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
LAMB2-209ENST00000480640 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
LAMB2-209ENST00000480640 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
LAMB2-209ENST00000480640 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
LAMB2-209ENST00000480640 MROH2BQ7Z745 1585 aa28.51■■■□□ 2.15
LAMB2-209ENST00000480640 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
LAMB2-209ENST00000480640 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
LAMB2-209ENST00000480640 NESP48681 1621 aa28.3■■■□□ 2.12
LAMB2-209ENST00000480640 WIZO95785 1651 aa28.21■■■□□ 2.11
LAMB2-209ENST00000480640 CUX2O14529 1486 aa28.19■■■□□ 2.1
LAMB2-209ENST00000480640 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
LAMB2-209ENST00000480640 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
LAMB2-209ENST00000480640 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
LAMB2-209ENST00000480640 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
LAMB2-209ENST00000480640 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
LAMB2-209ENST00000480640 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
LAMB2-209ENST00000480640 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
LAMB2-209ENST00000480640 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
LAMB2-209ENST00000480640 MRC2Q9UBG0 1479 aa27.72■■■□□ 2.03
LAMB2-209ENST00000480640 CFTRP13569 1480 aa27.67■■■□□ 2.02
LAMB2-209ENST00000480640 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
LAMB2-209ENST00000480640 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
LAMB2-209ENST00000480640 WDR62O43379 1518 aa27.63■■■□□ 2.01
LAMB2-209ENST00000480640 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
LAMB2-209ENST00000480640 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
LAMB2-209ENST00000480640 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
LAMB2-209ENST00000480640 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
LAMB2-209ENST00000480640 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
LAMB2-209ENST00000480640 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
LAMB2-209ENST00000480640 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
LAMB2-209ENST00000480640 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
LAMB2-209ENST00000480640 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
LAMB2-209ENST00000480640 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
LAMB2-209ENST00000480640 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
LAMB2-209ENST00000480640 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
LAMB2-209ENST00000480640 TARBP1Q13395 1621 aaKnown RBP26.89■■□□□ 1.9
LAMB2-209ENST00000480640 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
LAMB2-209ENST00000480640 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.88
LAMB2-209ENST00000480640 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
LAMB2-209ENST00000480640 CUX1P39880 1505 aa26.79■■□□□ 1.88
LAMB2-209ENST00000480640 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
LAMB2-209ENST00000480640 SOGA1O94964 1423 aa26.75■■□□□ 1.87
LAMB2-209ENST00000480640 CHD1O14646 1710 aa26.68■■□□□ 1.86
LAMB2-209ENST00000480640 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
LAMB2-209ENST00000480640 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
LAMB2-209ENST00000480640 FBLN2P98095 1184 aa26.61■■□□□ 1.85
LAMB2-209ENST00000480640 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
LAMB2-209ENST00000480640 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
LAMB2-209ENST00000480640 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
LAMB2-209ENST00000480640 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
LAMB2-209ENST00000480640 ARHGEF11O15085 1522 aa26.53■■□□□ 1.84
LAMB2-209ENST00000480640 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
LAMB2-209ENST00000480640 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
LAMB2-209ENST00000480640 MAGI1Q96QZ7 1491 aaPredicted RBP26.48■■□□□ 1.83
LAMB2-209ENST00000480640 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
LAMB2-209ENST00000480640 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
LAMB2-209ENST00000480640 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
LAMB2-209ENST00000480640 WRNQ14191 1432 aaPredicted RBP eCLIP26.43■■□□□ 1.82
LAMB2-209ENST00000480640 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
LAMB2-209ENST00000480640 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
LAMB2-209ENST00000480640 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
LAMB2-209ENST00000480640 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
LAMB2-209ENST00000480640 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
LAMB2-209ENST00000480640 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
LAMB2-209ENST00000480640 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
LAMB2-209ENST00000480640 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
LAMB2-209ENST00000480640 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
LAMB2-209ENST00000480640 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
LAMB2-209ENST00000480640 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
LAMB2-209ENST00000480640 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
LAMB2-209ENST00000480640 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
LAMB2-209ENST00000480640 NUP160Q12769 1436 aa26.05■■□□□ 1.76
LAMB2-209ENST00000480640 ERCC6L2Q5T890 1561 aa25.97■■□□□ 1.75
LAMB2-209ENST00000480640 TRHP20396 242 aaPredicted RBP25.96■■□□□ 1.75
LAMB2-209ENST00000480640 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
LAMB2-209ENST00000480640 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
LAMB2-209ENST00000480640 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
LAMB2-209ENST00000480640 CUL7Q14999 1698 aa25.84■■□□□ 1.73
LAMB2-209ENST00000480640 IGF1RP08069 1367 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms