RNA–Protein interactions for RNA: ENST00000496742.5

SSR2-213, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3 BASIC

Gene SSR2, Length 825 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-213ENST00000496742 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
SSR2-213ENST00000496742 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
SSR2-213ENST00000496742 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
SSR2-213ENST00000496742 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
SSR2-213ENST00000496742 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
SSR2-213ENST00000496742 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
SSR2-213ENST00000496742 ABCC9O60706 1549 aa17.57■□□□□ 0.4
SSR2-213ENST00000496742 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
SSR2-213ENST00000496742 NACADO15069 1562 aa17.4■□□□□ 0.38
SSR2-213ENST00000496742 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SSR2-213ENST00000496742 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
SSR2-213ENST00000496742 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
SSR2-213ENST00000496742 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
SSR2-213ENST00000496742 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
SSR2-213ENST00000496742 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
SSR2-213ENST00000496742 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
SSR2-213ENST00000496742 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
SSR2-213ENST00000496742 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
SSR2-213ENST00000496742 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSR2-213ENST00000496742 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
SSR2-213ENST00000496742 WIZO95785 1651 aa16.48■□□□□ 0.23
SSR2-213ENST00000496742 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
SSR2-213ENST00000496742 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
SSR2-213ENST00000496742 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
SSR2-213ENST00000496742 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
SSR2-213ENST00000496742 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
SSR2-213ENST00000496742 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
SSR2-213ENST00000496742 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
SSR2-213ENST00000496742 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
SSR2-213ENST00000496742 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
SSR2-213ENST00000496742 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
SSR2-213ENST00000496742 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
SSR2-213ENST00000496742 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
SSR2-213ENST00000496742 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
SSR2-213ENST00000496742 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
SSR2-213ENST00000496742 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
SSR2-213ENST00000496742 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
SSR2-213ENST00000496742 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
SSR2-213ENST00000496742 CFTRP13569 1480 aa15.71■□□□□ 0.1
SSR2-213ENST00000496742 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
SSR2-213ENST00000496742 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
SSR2-213ENST00000496742 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
SSR2-213ENST00000496742 EEA1Q15075 1411 aa15.62■□□□□ 0.09
SSR2-213ENST00000496742 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
SSR2-213ENST00000496742 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
SSR2-213ENST00000496742 SOGA1O94964 1423 aa15.57■□□□□ 0.08
SSR2-213ENST00000496742 CUX1P39880 1505 aa15.52■□□□□ 0.07
SSR2-213ENST00000496742 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
SSR2-213ENST00000496742 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
SSR2-213ENST00000496742 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
SSR2-213ENST00000496742 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
SSR2-213ENST00000496742 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
SSR2-213ENST00000496742 NESP48681 1621 aa15.44■□□□□ 0.06
SSR2-213ENST00000496742 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
SSR2-213ENST00000496742 KIF21BO75037 1637 aa15.39■□□□□ 0.05
SSR2-213ENST00000496742 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
SSR2-213ENST00000496742 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
SSR2-213ENST00000496742 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
SSR2-213ENST00000496742 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
SSR2-213ENST00000496742 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
SSR2-213ENST00000496742 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
SSR2-213ENST00000496742 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
SSR2-213ENST00000496742 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
SSR2-213ENST00000496742 KIF21AQ7Z4S6 1674 aa15.28■□□□□ 0.04
SSR2-213ENST00000496742 CUX2O14529 1486 aa15.28■□□□□ 0.04
SSR2-213ENST00000496742 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
SSR2-213ENST00000496742 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
SSR2-213ENST00000496742 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
SSR2-213ENST00000496742 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
SSR2-213ENST00000496742 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
SSR2-213ENST00000496742 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
SSR2-213ENST00000496742 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
SSR2-213ENST00000496742 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
SSR2-213ENST00000496742 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
SSR2-213ENST00000496742 IGF1RP08069 1367 aa15.17■□□□□ 0.02
SSR2-213ENST00000496742 PCGF6Q9BYE7 350 aa15.16■□□□□ 0.02
SSR2-213ENST00000496742 WDR97A6NE52 1622 aa15.15■□□□□ 0.02
SSR2-213ENST00000496742 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
SSR2-213ENST00000496742 CLIP1P30622 1438 aa15.15■□□□□ 0.02
SSR2-213ENST00000496742 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
SSR2-213ENST00000496742 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
SSR2-213ENST00000496742 CUL7Q14999 1698 aa15.09■□□□□ 0.01
SSR2-213ENST00000496742 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
SSR2-213ENST00000496742 WDR62O43379 1518 aa15.07■□□□□ 0
SSR2-213ENST00000496742 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
SSR2-213ENST00000496742 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
SSR2-213ENST00000496742 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
SSR2-213ENST00000496742 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
SSR2-213ENST00000496742 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
SSR2-213ENST00000496742 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
SSR2-213ENST00000496742 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
SSR2-213ENST00000496742 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
SSR2-213ENST00000496742 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
SSR2-213ENST00000496742 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
SSR2-213ENST00000496742 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
SSR2-213ENST00000496742 APLP2Q06481 763 aa14.96□□□□□ -0.01
SSR2-213ENST00000496742 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
SSR2-213ENST00000496742 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SSR2-213ENST00000496742 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSR2-213ENST00000496742 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms