RNA–Protein interactions for RNA: ENST00000538659.1

LAMB2-218, Transcript of laminin subunit beta 2, humanhuman

TSL 2

Gene LAMB2, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-218ENST00000538659 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
LAMB2-218ENST00000538659 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
LAMB2-218ENST00000538659 ABCC9O60706 1549 aa25.17■■□□□ 1.62
LAMB2-218ENST00000538659 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
LAMB2-218ENST00000538659 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
LAMB2-218ENST00000538659 NACADO15069 1562 aa24.04■■□□□ 1.44
LAMB2-218ENST00000538659 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
LAMB2-218ENST00000538659 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
LAMB2-218ENST00000538659 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
LAMB2-218ENST00000538659 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
LAMB2-218ENST00000538659 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
LAMB2-218ENST00000538659 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
LAMB2-218ENST00000538659 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
LAMB2-218ENST00000538659 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
LAMB2-218ENST00000538659 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
LAMB2-218ENST00000538659 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
LAMB2-218ENST00000538659 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
LAMB2-218ENST00000538659 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
LAMB2-218ENST00000538659 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
LAMB2-218ENST00000538659 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
LAMB2-218ENST00000538659 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
LAMB2-218ENST00000538659 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
LAMB2-218ENST00000538659 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
LAMB2-218ENST00000538659 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
LAMB2-218ENST00000538659 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
LAMB2-218ENST00000538659 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
LAMB2-218ENST00000538659 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
LAMB2-218ENST00000538659 WIZO95785 1651 aa21.79■■□□□ 1.08
LAMB2-218ENST00000538659 ERCC6Q03468 1493 aa21.77■■□□□ 1.07
LAMB2-218ENST00000538659 NESP48681 1621 aa21.69■■□□□ 1.06
LAMB2-218ENST00000538659 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
LAMB2-218ENST00000538659 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
LAMB2-218ENST00000538659 CUX2O14529 1486 aa21.55■■□□□ 1.04
LAMB2-218ENST00000538659 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
LAMB2-218ENST00000538659 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
LAMB2-218ENST00000538659 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
LAMB2-218ENST00000538659 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
LAMB2-218ENST00000538659 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
LAMB2-218ENST00000538659 CFTRP13569 1480 aa21.32■■□□□ 1
LAMB2-218ENST00000538659 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
LAMB2-218ENST00000538659 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
LAMB2-218ENST00000538659 FANCD2Q9BXW9 1451 aa21.27■■□□□ 1
LAMB2-218ENST00000538659 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
LAMB2-218ENST00000538659 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
LAMB2-218ENST00000538659 WDR62O43379 1518 aa21.19■□□□□ 0.98
LAMB2-218ENST00000538659 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
LAMB2-218ENST00000538659 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
LAMB2-218ENST00000538659 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
LAMB2-218ENST00000538659 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
LAMB2-218ENST00000538659 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
LAMB2-218ENST00000538659 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
LAMB2-218ENST00000538659 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
LAMB2-218ENST00000538659 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
LAMB2-218ENST00000538659 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
LAMB2-218ENST00000538659 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
LAMB2-218ENST00000538659 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
LAMB2-218ENST00000538659 SOGA1O94964 1423 aa20.67■□□□□ 0.9
LAMB2-218ENST00000538659 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
LAMB2-218ENST00000538659 CUX1P39880 1505 aa20.64■□□□□ 0.9
LAMB2-218ENST00000538659 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
LAMB2-218ENST00000538659 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
LAMB2-218ENST00000538659 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
LAMB2-218ENST00000538659 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
LAMB2-218ENST00000538659 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
LAMB2-218ENST00000538659 FBLN2P98095 1184 aa20.53■□□□□ 0.88
LAMB2-218ENST00000538659 CHD1O14646 1710 aa20.5■□□□□ 0.87
LAMB2-218ENST00000538659 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
LAMB2-218ENST00000538659 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
LAMB2-218ENST00000538659 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
LAMB2-218ENST00000538659 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
LAMB2-218ENST00000538659 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
LAMB2-218ENST00000538659 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
LAMB2-218ENST00000538659 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
LAMB2-218ENST00000538659 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
LAMB2-218ENST00000538659 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
LAMB2-218ENST00000538659 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
LAMB2-218ENST00000538659 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
LAMB2-218ENST00000538659 MAGI1Q96QZ7 1491 aaPredicted RBP20.39■□□□□ 0.85
LAMB2-218ENST00000538659 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
LAMB2-218ENST00000538659 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
LAMB2-218ENST00000538659 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
LAMB2-218ENST00000538659 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
LAMB2-218ENST00000538659 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
LAMB2-218ENST00000538659 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
LAMB2-218ENST00000538659 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
LAMB2-218ENST00000538659 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
LAMB2-218ENST00000538659 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
LAMB2-218ENST00000538659 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
LAMB2-218ENST00000538659 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
LAMB2-218ENST00000538659 GRIN2AQ12879 1464 aa20.14■□□□□ 0.81
LAMB2-218ENST00000538659 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
LAMB2-218ENST00000538659 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
LAMB2-218ENST00000538659 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
LAMB2-218ENST00000538659 NUP160Q12769 1436 aa20.02■□□□□ 0.8
LAMB2-218ENST00000538659 CUL7Q14999 1698 aa20■□□□□ 0.79
LAMB2-218ENST00000538659 IGF1RP08069 1367 aa19.99■□□□□ 0.79
LAMB2-218ENST00000538659 JPH4Q96JJ6 628 aa19.93■□□□□ 0.78
LAMB2-218ENST00000538659 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
LAMB2-218ENST00000538659 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
LAMB2-218ENST00000538659 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms