RNA–Protein interactions for RNA: ENST00000462163.1

RPN2-207, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-207ENST00000462163 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
RPN2-207ENST00000462163 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
RPN2-207ENST00000462163 ABCC9O60706 1549 aa19.64■□□□□ 0.73
RPN2-207ENST00000462163 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
RPN2-207ENST00000462163 NACADO15069 1562 aa19.02■□□□□ 0.64
RPN2-207ENST00000462163 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.63
RPN2-207ENST00000462163 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
RPN2-207ENST00000462163 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
RPN2-207ENST00000462163 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
RPN2-207ENST00000462163 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
RPN2-207ENST00000462163 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
RPN2-207ENST00000462163 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
RPN2-207ENST00000462163 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPN2-207ENST00000462163 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
RPN2-207ENST00000462163 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
RPN2-207ENST00000462163 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
RPN2-207ENST00000462163 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
RPN2-207ENST00000462163 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
RPN2-207ENST00000462163 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
RPN2-207ENST00000462163 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
RPN2-207ENST00000462163 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
RPN2-207ENST00000462163 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
RPN2-207ENST00000462163 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
RPN2-207ENST00000462163 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
RPN2-207ENST00000462163 WIZO95785 1651 aa17.55■□□□□ 0.4
RPN2-207ENST00000462163 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
RPN2-207ENST00000462163 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
RPN2-207ENST00000462163 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
RPN2-207ENST00000462163 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
RPN2-207ENST00000462163 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
RPN2-207ENST00000462163 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
RPN2-207ENST00000462163 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
RPN2-207ENST00000462163 NESP48681 1621 aa17.07■□□□□ 0.32
RPN2-207ENST00000462163 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
RPN2-207ENST00000462163 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
RPN2-207ENST00000462163 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
RPN2-207ENST00000462163 CFTRP13569 1480 aa16.98■□□□□ 0.31
RPN2-207ENST00000462163 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
RPN2-207ENST00000462163 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
RPN2-207ENST00000462163 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
RPN2-207ENST00000462163 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
RPN2-207ENST00000462163 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
RPN2-207ENST00000462163 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
RPN2-207ENST00000462163 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
RPN2-207ENST00000462163 WDR62O43379 1518 aa16.72■□□□□ 0.27
RPN2-207ENST00000462163 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
RPN2-207ENST00000462163 CUX2O14529 1486 aa16.65■□□□□ 0.26
RPN2-207ENST00000462163 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
RPN2-207ENST00000462163 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
RPN2-207ENST00000462163 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
RPN2-207ENST00000462163 CUX1P39880 1505 aa16.59■□□□□ 0.25
RPN2-207ENST00000462163 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
RPN2-207ENST00000462163 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
RPN2-207ENST00000462163 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
RPN2-207ENST00000462163 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
RPN2-207ENST00000462163 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
RPN2-207ENST00000462163 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
RPN2-207ENST00000462163 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
RPN2-207ENST00000462163 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
RPN2-207ENST00000462163 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
RPN2-207ENST00000462163 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
RPN2-207ENST00000462163 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
RPN2-207ENST00000462163 SOGA1O94964 1423 aa16.36■□□□□ 0.21
RPN2-207ENST00000462163 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
RPN2-207ENST00000462163 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
RPN2-207ENST00000462163 ABCA5Q8WWZ7 1642 aa16.31■□□□□ 0.2
RPN2-207ENST00000462163 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
RPN2-207ENST00000462163 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■■ 28.5
RPN2-207ENST00000462163 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
RPN2-207ENST00000462163 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
RPN2-207ENST00000462163 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
RPN2-207ENST00000462163 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
RPN2-207ENST00000462163 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
RPN2-207ENST00000462163 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
RPN2-207ENST00000462163 CHD1O14646 1710 aa16.15■□□□□ 0.18
RPN2-207ENST00000462163 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
RPN2-207ENST00000462163 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.18
RPN2-207ENST00000462163 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
RPN2-207ENST00000462163 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
RPN2-207ENST00000462163 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
RPN2-207ENST00000462163 CUL7Q14999 1698 aa16.09■□□□□ 0.17
RPN2-207ENST00000462163 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
RPN2-207ENST00000462163 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
RPN2-207ENST00000462163 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.16
RPN2-207ENST00000462163 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
RPN2-207ENST00000462163 IGF1RP08069 1367 aa16■□□□□ 0.15
RPN2-207ENST00000462163 EEA1Q15075 1411 aa15.98■□□□□ 0.15
RPN2-207ENST00000462163 FBLN2P98095 1184 aa15.96■□□□□ 0.15
RPN2-207ENST00000462163 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
RPN2-207ENST00000462163 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
RPN2-207ENST00000462163 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
RPN2-207ENST00000462163 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
RPN2-207ENST00000462163 NUP160Q12769 1436 aa15.91■□□□□ 0.14
RPN2-207ENST00000462163 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
RPN2-207ENST00000462163 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
RPN2-207ENST00000462163 KIF21BO75037 1637 aa15.88■□□□□ 0.13
RPN2-207ENST00000462163 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
RPN2-207ENST00000462163 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
RPN2-207ENST00000462163 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
RPN2-207ENST00000462163 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms