Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PPP1R3E-203ENST00000559314 2351 ntTSL 215.45■□□□□ 0.067e-15■■□□□ 13.6
U2AF2P26368 PPP1R3E-202ENST00000558058 3222 ntTSL 312.59□□□□□ -0.397e-15■■□□□ 13.6
U2AF2P26368 PPP1R3E-204ENST00000559942 1187 ntTSL 1 (best)10.36□□□□□ -0.757e-15■■□□□ 13.6
U2AF2P26368 PPP1R3E-205ENST00000560073 444 ntTSL 54.93□□□□□ -1.627e-15■■□□□ 13.6
U2AF2P26368 SNHG14-222ENST00000557108 3210 ntTSL 1 (best)8.1□□□□□ -1.117e-13■■□□□ 13.6
U2AF2P26368 TAPT1-216ENST00000513782 1016 ntTSL 23.25□□□□□ -1.894e-7■■□□□ 13.6
U2AF2P26368 U2SURP-209ENST00000480029 2855 ntTSL 22.24□□□□□ -2.058e-8■■□□□ 13.6
U2AF2P26368 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.973e-7■■□□□ 13.6
U2AF2P26368 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.913e-7■■□□□ 13.6
U2AF2P26368 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.873e-7■■□□□ 13.6
U2AF2P26368 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.433e-7■■□□□ 13.6
U2AF2P26368 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.423e-7■■□□□ 13.6
U2AF2P26368 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC9□□□□□ -0.972e-6■■□□□ 13.6
U2AF2P26368 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.832e-6■■□□□ 13.6
U2AF2P26368 SETD2-203ENST00000412450 4231 ntTSL 213.64□□□□□ -0.237e-8■■□□□ 13.6
U2AF2P26368 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.051e-6■■□□□ 13.6
U2AF2P26368 TPM3-209ENST00000368527 569 ntTSL 411.85□□□□□ -0.518e-15■■□□□ 13.6
U2AF2P26368 SEC24C-203ENST00000465076 4668 ntTSL 1 (best)12.54□□□□□ -0.42e-7■■□□□ 13.6
U2AF2P26368 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.522e-7■■□□□ 13.6
U2AF2P26368 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-7■■□□□ 13.6
U2AF2P26368 SEC24C-207ENST00000635550 3424 ntTSL 28.53□□□□□ -1.042e-7■■□□□ 13.6
U2AF2P26368 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.43e-7■■□□□ 13.6
U2AF2P26368 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.383e-7■■□□□ 13.6
U2AF2P26368 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.383e-7■■□□□ 13.6
U2AF2P26368 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.65■■□□□ 1.383e-7■■□□□ 13.6
U2AF2P26368 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.33e-7■■□□□ 13.6
U2AF2P26368 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.293e-7■■□□□ 13.6
U2AF2P26368 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.263e-7■■□□□ 13.6
U2AF2P26368 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.223e-7■■□□□ 13.6
U2AF2P26368 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.02■□□□□ 0.963e-7■■□□□ 13.6
U2AF2P26368 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.59■□□□□ 0.893e-7■■□□□ 13.6
U2AF2P26368 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.52■□□□□ 0.883e-7■■□□□ 13.6
U2AF2P26368 ZNF207-213ENST00000581531 3560 ntTSL 57.41□□□□□ -1.227e-9■■□□□ 13.6
U2AF2P26368 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC14.2□□□□□ -0.148e-7■■□□□ 13.6
U2AF2P26368 LUC7L-212ENST00000443357 833 ntTSL 27.55□□□□□ -1.28e-7■■□□□ 13.6
U2AF2P26368 FRRS1-204ENST00000492943 440 ntTSL 54.02□□□□□ -1.774e-8■■□□□ 13.6
U2AF2P26368 FRRS1-203ENST00000489209 216 ntTSL 53.92□□□□□ -1.784e-8■■□□□ 13.6
U2AF2P26368 AP1G2-230ENST00000557162 561 ntTSL 411.37□□□□□ -0.592e-10■■□□□ 13.6
U2AF2P26368 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.243e-7■■□□□ 13.6
U2AF2P26368 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.243e-7■■□□□ 13.6
U2AF2P26368 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.243e-7■■□□□ 13.6
U2AF2P26368 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.363e-7■■□□□ 13.6
U2AF2P26368 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.473e-7■■□□□ 13.6
U2AF2P26368 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.483e-7■■□□□ 13.6
U2AF2P26368 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.483e-7■■□□□ 13.6
U2AF2P26368 MTPAP-202ENST00000417581 816 ntTSL 57.49□□□□□ -1.211e-7■■□□□ 13.6
U2AF2P26368 ANAPC5-215ENST00000539612 654 ntTSL 36.46□□□□□ -1.384e-9■■□□□ 13.6
U2AF2P26368 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.34□□□□□ -1.243e-6■■□□□ 13.6
U2AF2P26368 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.966e-7■■□□□ 13.6
U2AF2P26368 TMBIM6-221ENST00000550040 952 ntTSL 26.52□□□□□ -1.376e-7■■□□□ 13.6
U2AF2P26368 TMBIM6-207ENST00000547013 428 ntTSL 26.26□□□□□ -1.416e-7■■□□□ 13.6
U2AF2P26368 ZMYM2-211ENST00000620447 1069 ntTSL 1 (best)3.66□□□□□ -1.825e-9■■□□□ 13.6
U2AF2P26368 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.293e-6■■□□□ 13.6
U2AF2P26368 RPGR-206ENST00000474584 2268 ntTSL 216.38■□□□□ 0.213e-6■■□□□ 13.6
U2AF2P26368 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.013e-11■■□□□ 13.6
U2AF2P26368 NPC1-202ENST00000540608 2790 ntTSL 214.37□□□□□ -0.113e-11■■□□□ 13.6
U2AF2P26368 RPGR-208ENST00000482855 2819 ntTSL 213.34□□□□□ -0.273e-6■■□□□ 13.6
U2AF2P26368 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.357e-7■■□□□ 13.6
U2AF2P26368 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.383e-6■■□□□ 13.6
U2AF2P26368 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.543e-6■■□□□ 13.6
U2AF2P26368 FAM126A-208ENST00000477349 544 ntTSL 411.42□□□□□ -0.589e-7■■□□□ 13.6
U2AF2P26368 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.593e-6■■□□□ 13.6
U2AF2P26368 RFX3-210ENST00000457373 822 ntTSL 511.36□□□□□ -0.593e-6■■□□□ 13.6
U2AF2P26368 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC10.91□□□□□ -0.663e-6■■□□□ 13.6
U2AF2P26368 CDK5RAP2-216ENST00000483412 6235 ntTSL 1 (best)10.9□□□□□ -0.673e-6■■□□□ 13.6
U2AF2P26368 NPC1-210ENST00000591051 3171 ntTSL 210.74□□□□□ -0.693e-11■■□□□ 13.6
U2AF2P26368 RFX3-207ENST00000449190 869 ntTSL 310.41□□□□□ -0.743e-6■■□□□ 13.6
U2AF2P26368 RFX3-209ENST00000451859 740 ntTSL 39.6□□□□□ -0.873e-6■■□□□ 13.6
U2AF2P26368 RPGR-210ENST00000494841 653 ntTSL 1 (best)8.48□□□□□ -1.053e-6■■□□□ 13.6
U2AF2P26368 SLC5A9-208ENST00000527929 520 ntTSL 48.44□□□□□ -1.063e-6■■□□□ 13.6
U2AF2P26368 RFWD2-206ENST00000461830 2131 ntTSL 58.18□□□□□ -1.13e-7■■□□□ 13.6
U2AF2P26368 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.333e-6■■□□□ 13.6
U2AF2P26368 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.363e-6■■□□□ 13.6
U2AF2P26368 HELLS-203ENST00000371327 4987 ntTSL 23.99□□□□□ -1.779e-7■■□□□ 13.6
U2AF2P26368 FAM208A-206ENST00000478052 299 ntTSL 32.24□□□□□ -2.054e-8■■□□□ 13.6
U2AF2P26368 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.277e-7■■□□□ 13.5
U2AF2P26368 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.367e-7■■□□□ 13.5
U2AF2P26368 TNRC6A-216ENST00000569098 587 ntTSL 56.49□□□□□ -1.378e-11■■□□□ 13.5
U2AF2P26368 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.86□□□□□ -0.992e-29■■□□□ 13.5
U2AF2P26368 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.6□□□□□ -1.352e-29■■□□□ 13.5
U2AF2P26368 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.58□□□□□ -1.362e-29■■□□□ 13.5
U2AF2P26368 ALB-205ENST00000476441 1604 ntTSL 56.58□□□□□ -1.362e-29■■□□□ 13.5
U2AF2P26368 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.08□□□□□ -1.442e-29■■□□□ 13.5
U2AF2P26368 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.86□□□□□ -1.472e-29■■□□□ 13.5
U2AF2P26368 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.522e-29■■□□□ 13.5
U2AF2P26368 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.44□□□□□ -1.542e-29■■□□□ 13.5
U2AF2P26368 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.173e-8■■□□□ 13.5
U2AF2P26368 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.033e-8■■□□□ 13.5
U2AF2P26368 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)7.51□□□□□ -1.217e-7■■□□□ 13.5
U2AF2P26368 NCOR1-223ENST00000583226 614 ntTSL 58.35□□□□□ -1.073e-6■■□□□ 13.5
U2AF2P26368 ZNF644-208ENST00000482467 710 ntTSL 517.91■□□□□ 0.464e-16■■□□□ 13.5
U2AF2P26368 ZNF644-210ENST00000495966 820 ntTSL 38.48□□□□□ -1.054e-16■■□□□ 13.5
U2AF2P26368 ABCD3-204ENST00000468860 661 ntTSL 320.23■□□□□ 0.836e-7■■□□□ 13.5
U2AF2P26368 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.6□□□□□ -0.236e-7■■□□□ 13.5
U2AF2P26368 TRAPPC12-214ENST00000462983 543 ntTSL 410.43□□□□□ -0.741e-7■■□□□ 13.5
U2AF2P26368 CNOT1-218ENST00000569732 906 ntTSL 37.99□□□□□ -1.134e-13■■□□□ 13.5
U2AF2P26368 CNOT1-203ENST00000562046 578 ntTSL 52.56□□□□□ -24e-13■■□□□ 13.5
U2AF2P26368 AP3B1-203ENST00000517940 974 ntTSL 213.53□□□□□ -0.242e-6■■□□□ 13.5
U2AF2P26368 AP3B1-205ENST00000519888 519 ntTSL 50.62□□□□□ -2.312e-6■■□□□ 13.5
U2AF2P26368 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.79□□□□□ -1.489e-8■■□□□ 13.5
Retrieved 100 of 36,523 protein–RNA pairs in 179.1 ms