RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-223ENST00000583226 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
NCOR1-223ENST00000583226 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
NCOR1-223ENST00000583226 SENP3Q9H4L4 574 aaPredicted RBP26.22■■□□□ 1.79
NCOR1-223ENST00000583226 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
NCOR1-223ENST00000583226 FOXD1Q16676 465 aa24.38■■□□□ 1.49
NCOR1-223ENST00000583226 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
NCOR1-223ENST00000583226 ADRA2BP18089 450 aa23.24■■□□□ 1.31
NCOR1-223ENST00000583226 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
NCOR1-223ENST00000583226 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
NCOR1-223ENST00000583226 MSH5O43196 834 aa22.59■■□□□ 1.21
NCOR1-223ENST00000583226 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
NCOR1-223ENST00000583226 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
NCOR1-223ENST00000583226 MAPK8IP2Q13387 824 aaPredicted RBP21.18■□□□□ 0.98
NCOR1-223ENST00000583226 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
NCOR1-223ENST00000583226 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
NCOR1-223ENST00000583226 CNKSR2Q8WXI2 1034 aa20.65■□□□□ 0.9
NCOR1-223ENST00000583226 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
NCOR1-223ENST00000583226 KCNA4P22459 653 aa20.38■□□□□ 0.85
NCOR1-223ENST00000583226 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
NCOR1-223ENST00000583226 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
NCOR1-223ENST00000583226 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
NCOR1-223ENST00000583226 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
NCOR1-223ENST00000583226 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
NCOR1-223ENST00000583226 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
NCOR1-223ENST00000583226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.46■□□□□ 0.714e-7■■□□□ 13.8
NCOR1-223ENST00000583226 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
NCOR1-223ENST00000583226 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
NCOR1-223ENST00000583226 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
NCOR1-223ENST00000583226 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
NCOR1-223ENST00000583226 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
NCOR1-223ENST00000583226 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
NCOR1-223ENST00000583226 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
NCOR1-223ENST00000583226 ZBTB22O15209 634 aa18.72■□□□□ 0.59
NCOR1-223ENST00000583226 MYCNP04198 464 aaPredicted RBP18.72■□□□□ 0.59
NCOR1-223ENST00000583226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
NCOR1-223ENST00000583226 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
NCOR1-223ENST00000583226 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
NCOR1-223ENST00000583226 CAPN15O75808 1086 aa18.64■□□□□ 0.57
NCOR1-223ENST00000583226 ABCC9O60706 1549 aa18.63■□□□□ 0.57
NCOR1-223ENST00000583226 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
NCOR1-223ENST00000583226 APLP2Q06481 763 aa18.58■□□□□ 0.56
NCOR1-223ENST00000583226 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
NCOR1-223ENST00000583226 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
NCOR1-223ENST00000583226 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
NCOR1-223ENST00000583226 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
NCOR1-223ENST00000583226 DSG3P32926 999 aa18.29■□□□□ 0.52
NCOR1-223ENST00000583226 ABCB7O75027 752 aa18.27■□□□□ 0.52
NCOR1-223ENST00000583226 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
NCOR1-223ENST00000583226 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
NCOR1-223ENST00000583226 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
NCOR1-223ENST00000583226 POLA2Q14181 598 aa18.06■□□□□ 0.48
NCOR1-223ENST00000583226 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
NCOR1-223ENST00000583226 FBLN2P98095 1184 aa17.55■□□□□ 0.4
NCOR1-223ENST00000583226 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
NCOR1-223ENST00000583226 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
NCOR1-223ENST00000583226 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
NCOR1-223ENST00000583226 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
NCOR1-223ENST00000583226 NACADO15069 1562 aa17.28■□□□□ 0.36
NCOR1-223ENST00000583226 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
NCOR1-223ENST00000583226 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
NCOR1-223ENST00000583226 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
NCOR1-223ENST00000583226 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
NCOR1-223ENST00000583226 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
NCOR1-223ENST00000583226 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
NCOR1-223ENST00000583226 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
NCOR1-223ENST00000583226 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
NCOR1-223ENST00000583226 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
NCOR1-223ENST00000583226 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
NCOR1-223ENST00000583226 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
NCOR1-223ENST00000583226 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
NCOR1-223ENST00000583226 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
NCOR1-223ENST00000583226 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
NCOR1-223ENST00000583226 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
NCOR1-223ENST00000583226 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
NCOR1-223ENST00000583226 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
NCOR1-223ENST00000583226 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
NCOR1-223ENST00000583226 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
NCOR1-223ENST00000583226 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
NCOR1-223ENST00000583226 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
NCOR1-223ENST00000583226 FKBP8Q14318 412 aa16.7■□□□□ 0.26
NCOR1-223ENST00000583226 POTEHQ6S545 545 aa16.69■□□□□ 0.26
NCOR1-223ENST00000583226 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
NCOR1-223ENST00000583226 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
NCOR1-223ENST00000583226 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
NCOR1-223ENST00000583226 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.247e-7■■□□□ 14.4
NCOR1-223ENST00000583226 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
NCOR1-223ENST00000583226 PROM2Q8N271 834 aa16.46■□□□□ 0.23
NCOR1-223ENST00000583226 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
NCOR1-223ENST00000583226 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
NCOR1-223ENST00000583226 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
NCOR1-223ENST00000583226 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
NCOR1-223ENST00000583226 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
NCOR1-223ENST00000583226 CUX2O14529 1486 aa16.35■□□□□ 0.21
NCOR1-223ENST00000583226 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
NCOR1-223ENST00000583226 HAX1O00165 279 aa16.21■□□□□ 0.19
NCOR1-223ENST00000583226 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
NCOR1-223ENST00000583226 MIER1Q8N108 512 aa16.14■□□□□ 0.17
NCOR1-223ENST00000583226 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
NCOR1-223ENST00000583226 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
NCOR1-223ENST00000583226 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms