RNA–Protein interactions for RNA: ENST00000465076.5

SEC24C-203, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24C, Length 4,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-203ENST00000465076 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
SEC24C-203ENST00000465076 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.82
SEC24C-203ENST00000465076 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
SEC24C-203ENST00000465076 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
SEC24C-203ENST00000465076 ABCC9O60706 1549 aa18■□□□□ 0.47
SEC24C-203ENST00000465076 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
SEC24C-203ENST00000465076 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
SEC24C-203ENST00000465076 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
SEC24C-203ENST00000465076 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
SEC24C-203ENST00000465076 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
SEC24C-203ENST00000465076 APLP2Q06481 763 aa17.52■□□□□ 0.4
SEC24C-203ENST00000465076 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
SEC24C-203ENST00000465076 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
SEC24C-203ENST00000465076 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
SEC24C-203ENST00000465076 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
SEC24C-203ENST00000465076 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
SEC24C-203ENST00000465076 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
SEC24C-203ENST00000465076 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
SEC24C-203ENST00000465076 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
SEC24C-203ENST00000465076 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
SEC24C-203ENST00000465076 MYT1Q01538 1121 aa17.07■□□□□ 0.32
SEC24C-203ENST00000465076 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
SEC24C-203ENST00000465076 NACADO15069 1562 aa17.04■□□□□ 0.32
SEC24C-203ENST00000465076 HRCP23327 699 aa16.99■□□□□ 0.31
SEC24C-203ENST00000465076 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
SEC24C-203ENST00000465076 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.31
SEC24C-203ENST00000465076 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
SEC24C-203ENST00000465076 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
SEC24C-203ENST00000465076 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
SEC24C-203ENST00000465076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
SEC24C-203ENST00000465076 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
SEC24C-203ENST00000465076 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.26
SEC24C-203ENST00000465076 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
SEC24C-203ENST00000465076 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.25
SEC24C-203ENST00000465076 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
SEC24C-203ENST00000465076 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
SEC24C-203ENST00000465076 FBLN2P98095 1184 aa16.51■□□□□ 0.23
SEC24C-203ENST00000465076 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
SEC24C-203ENST00000465076 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
SEC24C-203ENST00000465076 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
SEC24C-203ENST00000465076 ITGAEP38570 1179 aa16.4■□□□□ 0.22
SEC24C-203ENST00000465076 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
SEC24C-203ENST00000465076 ERICH6Q7L0X2 663 aa16.24■□□□□ 0.19
SEC24C-203ENST00000465076 NEFLP07196 543 aa16.22■□□□□ 0.19
SEC24C-203ENST00000465076 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
SEC24C-203ENST00000465076 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
SEC24C-203ENST00000465076 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
SEC24C-203ENST00000465076 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
SEC24C-203ENST00000465076 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
SEC24C-203ENST00000465076 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
SEC24C-203ENST00000465076 EEA1Q15075 1411 aa16.14■□□□□ 0.17
SEC24C-203ENST00000465076 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
SEC24C-203ENST00000465076 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
SEC24C-203ENST00000465076 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
SEC24C-203ENST00000465076 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
SEC24C-203ENST00000465076 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
SEC24C-203ENST00000465076 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC24C-203ENST00000465076 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
SEC24C-203ENST00000465076 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
SEC24C-203ENST00000465076 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.15
SEC24C-203ENST00000465076 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
SEC24C-203ENST00000465076 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
SEC24C-203ENST00000465076 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
SEC24C-203ENST00000465076 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
SEC24C-203ENST00000465076 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
SEC24C-203ENST00000465076 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
SEC24C-203ENST00000465076 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
SEC24C-203ENST00000465076 CLIP1P30622 1438 aa15.91■□□□□ 0.14
SEC24C-203ENST00000465076 WIZO95785 1651 aa15.89■□□□□ 0.13
SEC24C-203ENST00000465076 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
SEC24C-203ENST00000465076 CLSPNQ9HAW4 1339 aa15.86■□□□□ 0.13
SEC24C-203ENST00000465076 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
SEC24C-203ENST00000465076 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.13
SEC24C-203ENST00000465076 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
SEC24C-203ENST00000465076 CUX2O14529 1486 aa15.82■□□□□ 0.12
SEC24C-203ENST00000465076 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
SEC24C-203ENST00000465076 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
SEC24C-203ENST00000465076 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
SEC24C-203ENST00000465076 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
SEC24C-203ENST00000465076 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
SEC24C-203ENST00000465076 NCAPD3P42695 1498 aa15.77■□□□□ 0.12
SEC24C-203ENST00000465076 SOGA1O94964 1423 aa15.77■□□□□ 0.11
SEC24C-203ENST00000465076 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
SEC24C-203ENST00000465076 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
SEC24C-203ENST00000465076 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
SEC24C-203ENST00000465076 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
SEC24C-203ENST00000465076 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
SEC24C-203ENST00000465076 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
SEC24C-203ENST00000465076 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
SEC24C-203ENST00000465076 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
SEC24C-203ENST00000465076 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
SEC24C-203ENST00000465076 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
SEC24C-203ENST00000465076 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
SEC24C-203ENST00000465076 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
SEC24C-203ENST00000465076 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
SEC24C-203ENST00000465076 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
SEC24C-203ENST00000465076 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
SEC24C-203ENST00000465076 CFDP1Q9UEE9 299 aaPredicted RBP15.55■□□□□ 0.08
SEC24C-203ENST00000465076 CARMIL2Q6F5E8 1435 aa15.55■□□□□ 0.08
SEC24C-203ENST00000465076 BCANQ96GW7 911 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms