RNA–Protein interactions for RNA: ENST00000559314.5

PPP1R3E-203, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 2,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-203ENST00000559314 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
PPP1R3E-203ENST00000559314 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
PPP1R3E-203ENST00000559314 ABCC9O60706 1549 aa22.42■■□□□ 1.18
PPP1R3E-203ENST00000559314 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
PPP1R3E-203ENST00000559314 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
PPP1R3E-203ENST00000559314 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
PPP1R3E-203ENST00000559314 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
PPP1R3E-203ENST00000559314 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
PPP1R3E-203ENST00000559314 NACADO15069 1562 aa21.88■■□□□ 1.09
PPP1R3E-203ENST00000559314 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
PPP1R3E-203ENST00000559314 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
PPP1R3E-203ENST00000559314 HRCP23327 699 aa21.78■■□□□ 1.08
PPP1R3E-203ENST00000559314 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
PPP1R3E-203ENST00000559314 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
PPP1R3E-203ENST00000559314 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
PPP1R3E-203ENST00000559314 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
PPP1R3E-203ENST00000559314 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
PPP1R3E-203ENST00000559314 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
PPP1R3E-203ENST00000559314 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
PPP1R3E-203ENST00000559314 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.956e-6■■□□□ 12.8
PPP1R3E-203ENST00000559314 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
PPP1R3E-203ENST00000559314 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3E-203ENST00000559314 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
PPP1R3E-203ENST00000559314 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
PPP1R3E-203ENST00000559314 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
PPP1R3E-203ENST00000559314 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
PPP1R3E-203ENST00000559314 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
PPP1R3E-203ENST00000559314 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
PPP1R3E-203ENST00000559314 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
PPP1R3E-203ENST00000559314 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
PPP1R3E-203ENST00000559314 CC2D2AQ9P2K1 1620 aa20.37■□□□□ 0.85
PPP1R3E-203ENST00000559314 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
PPP1R3E-203ENST00000559314 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
PPP1R3E-203ENST00000559314 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
PPP1R3E-203ENST00000559314 WIZO95785 1651 aa20.25■□□□□ 0.83
PPP1R3E-203ENST00000559314 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
PPP1R3E-203ENST00000559314 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
PPP1R3E-203ENST00000559314 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
PPP1R3E-203ENST00000559314 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
PPP1R3E-203ENST00000559314 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
PPP1R3E-203ENST00000559314 EHMT2Q96KQ7 1210 aa20.13■□□□□ 0.81
PPP1R3E-203ENST00000559314 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.8
PPP1R3E-203ENST00000559314 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
PPP1R3E-203ENST00000559314 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
PPP1R3E-203ENST00000559314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
PPP1R3E-203ENST00000559314 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
PPP1R3E-203ENST00000559314 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
PPP1R3E-203ENST00000559314 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.76
PPP1R3E-203ENST00000559314 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
PPP1R3E-203ENST00000559314 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
PPP1R3E-203ENST00000559314 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
PPP1R3E-203ENST00000559314 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
PPP1R3E-203ENST00000559314 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
PPP1R3E-203ENST00000559314 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
PPP1R3E-203ENST00000559314 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
PPP1R3E-203ENST00000559314 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
PPP1R3E-203ENST00000559314 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
PPP1R3E-203ENST00000559314 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
PPP1R3E-203ENST00000559314 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.72
PPP1R3E-203ENST00000559314 SOGA1O94964 1423 aa19.57■□□□□ 0.72
PPP1R3E-203ENST00000559314 CFTRP13569 1480 aa19.57■□□□□ 0.72
PPP1R3E-203ENST00000559314 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
PPP1R3E-203ENST00000559314 NESP48681 1621 aa19.55■□□□□ 0.72
PPP1R3E-203ENST00000559314 MYT1Q01538 1121 aa19.54■□□□□ 0.72
PPP1R3E-203ENST00000559314 EEA1Q15075 1411 aa19.51■□□□□ 0.71
PPP1R3E-203ENST00000559314 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
PPP1R3E-203ENST00000559314 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
PPP1R3E-203ENST00000559314 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
PPP1R3E-203ENST00000559314 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
PPP1R3E-203ENST00000559314 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
PPP1R3E-203ENST00000559314 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
PPP1R3E-203ENST00000559314 MIER1Q8N108 512 aa19.37■□□□□ 0.69
PPP1R3E-203ENST00000559314 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
PPP1R3E-203ENST00000559314 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
PPP1R3E-203ENST00000559314 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
PPP1R3E-203ENST00000559314 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
PPP1R3E-203ENST00000559314 ERCC6Q03468 1493 aa19.27■□□□□ 0.68
PPP1R3E-203ENST00000559314 KIF21BO75037 1637 aa19.25■□□□□ 0.67
PPP1R3E-203ENST00000559314 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
PPP1R3E-203ENST00000559314 CLIP1P30622 1438 aa19.21■□□□□ 0.67
PPP1R3E-203ENST00000559314 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
PPP1R3E-203ENST00000559314 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
PPP1R3E-203ENST00000559314 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
PPP1R3E-203ENST00000559314 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
PPP1R3E-203ENST00000559314 WDR62O43379 1518 aa19.16■□□□□ 0.66
PPP1R3E-203ENST00000559314 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
PPP1R3E-203ENST00000559314 CUX1P39880 1505 aa19.13■□□□□ 0.65
PPP1R3E-203ENST00000559314 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
PPP1R3E-203ENST00000559314 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
PPP1R3E-203ENST00000559314 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
PPP1R3E-203ENST00000559314 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
PPP1R3E-203ENST00000559314 APLP2Q06481 763 aa19.06■□□□□ 0.64
PPP1R3E-203ENST00000559314 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
PPP1R3E-203ENST00000559314 DHX57Q6P158 1386 aaKnown RBP19.01■□□□□ 0.63
PPP1R3E-203ENST00000559314 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
PPP1R3E-203ENST00000559314 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
PPP1R3E-203ENST00000559314 CUX2O14529 1486 aa18.97■□□□□ 0.63
PPP1R3E-203ENST00000559314 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
PPP1R3E-203ENST00000559314 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
PPP1R3E-203ENST00000559314 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms