RNA–Protein interactions for RNA: ENST00000371856.6

STAU1-207, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene STAU1, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-207ENST00000371856 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
STAU1-207ENST00000371856 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
STAU1-207ENST00000371856 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
STAU1-207ENST00000371856 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
STAU1-207ENST00000371856 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
STAU1-207ENST00000371856 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.25
STAU1-207ENST00000371856 HRCP23327 699 aa16.54■□□□□ 0.24
STAU1-207ENST00000371856 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.23
STAU1-207ENST00000371856 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
STAU1-207ENST00000371856 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
STAU1-207ENST00000371856 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
STAU1-207ENST00000371856 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
STAU1-207ENST00000371856 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
STAU1-207ENST00000371856 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
STAU1-207ENST00000371856 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
STAU1-207ENST00000371856 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
STAU1-207ENST00000371856 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
STAU1-207ENST00000371856 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
STAU1-207ENST00000371856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
STAU1-207ENST00000371856 YTHDC1Q96MU7 727 aaKnown RBP15.62■□□□□ 0.09
STAU1-207ENST00000371856 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
STAU1-207ENST00000371856 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
STAU1-207ENST00000371856 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
STAU1-207ENST00000371856 CENPBP07199 599 aaPredicted RBP15.49■□□□□ 0.07
STAU1-207ENST00000371856 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
STAU1-207ENST00000371856 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
STAU1-207ENST00000371856 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
STAU1-207ENST00000371856 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
STAU1-207ENST00000371856 ACIN1Q9UKV3 1341 aaKnown RBP15.33■□□□□ 0.05
STAU1-207ENST00000371856 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
STAU1-207ENST00000371856 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
STAU1-207ENST00000371856 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
STAU1-207ENST00000371856 APLP2Q06481 763 aa15.13■□□□□ 0.01
STAU1-207ENST00000371856 ABCC9O60706 1549 aa15.11■□□□□ 0.01
STAU1-207ENST00000371856 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
STAU1-207ENST00000371856 MYT1Q01538 1121 aa14.98□□□□□ -0.01
STAU1-207ENST00000371856 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
STAU1-207ENST00000371856 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
STAU1-207ENST00000371856 MIER1Q8N108 512 aa14.94□□□□□ -0.02
STAU1-207ENST00000371856 ITGAEP38570 1179 aa14.93□□□□□ -0.02
STAU1-207ENST00000371856 BCANQ96GW7 911 aa14.87□□□□□ -0.03
STAU1-207ENST00000371856 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
STAU1-207ENST00000371856 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
STAU1-207ENST00000371856 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
STAU1-207ENST00000371856 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
STAU1-207ENST00000371856 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
STAU1-207ENST00000371856 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
STAU1-207ENST00000371856 NEFLP07196 543 aa14.62□□□□□ -0.07
STAU1-207ENST00000371856 SOGA1O94964 1423 aa14.58□□□□□ -0.08
STAU1-207ENST00000371856 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
STAU1-207ENST00000371856 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
STAU1-207ENST00000371856 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
STAU1-207ENST00000371856 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
STAU1-207ENST00000371856 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
STAU1-207ENST00000371856 FKBP8Q14318 412 aa14.52□□□□□ -0.09
STAU1-207ENST00000371856 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
STAU1-207ENST00000371856 SUPT16HQ9Y5B9 1047 aaKnown RBP14.51□□□□□ -0.09
STAU1-207ENST00000371856 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
STAU1-207ENST00000371856 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
STAU1-207ENST00000371856 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
STAU1-207ENST00000371856 WIZO95785 1651 aa14.45□□□□□ -0.1
STAU1-207ENST00000371856 TNIKQ9UKE5 1360 aa14.44□□□□□ -0.1
STAU1-207ENST00000371856 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
STAU1-207ENST00000371856 CLIP1P30622 1438 aa14.42□□□□□ -0.1
STAU1-207ENST00000371856 KCNH8Q96L42 1107 aa14.42□□□□□ -0.1
STAU1-207ENST00000371856 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
STAU1-207ENST00000371856 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
STAU1-207ENST00000371856 TSHZ2Q9NRE2 1034 aa14.35□□□□□ -0.11
STAU1-207ENST00000371856 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
STAU1-207ENST00000371856 GOLGA3Q08378 1498 aa14.34□□□□□ -0.11
STAU1-207ENST00000371856 ANP32CO43423 234 aa14.29□□□□□ -0.12
STAU1-207ENST00000371856 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
STAU1-207ENST00000371856 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
STAU1-207ENST00000371856 NACADO15069 1562 aa14.28□□□□□ -0.12
STAU1-207ENST00000371856 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.12
STAU1-207ENST00000371856 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
STAU1-207ENST00000371856 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
STAU1-207ENST00000371856 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.14
STAU1-207ENST00000371856 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.14
STAU1-207ENST00000371856 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
STAU1-207ENST00000371856 EEA1Q15075 1411 aa14.19□□□□□ -0.14
STAU1-207ENST00000371856 CDK11AQ9UQ88 783 aaPredicted RBP14.18□□□□□ -0.14
STAU1-207ENST00000371856 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
STAU1-207ENST00000371856 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
STAU1-207ENST00000371856 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
STAU1-207ENST00000371856 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
STAU1-207ENST00000371856 DHX57Q6P158 1386 aaKnown RBP14.14□□□□□ -0.15
STAU1-207ENST00000371856 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
STAU1-207ENST00000371856 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
STAU1-207ENST00000371856 ARID3CA6NKF2 412 aa14.1□□□□□ -0.15
STAU1-207ENST00000371856 NBR1Q14596 966 aa14.09□□□□□ -0.15
STAU1-207ENST00000371856 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
STAU1-207ENST00000371856 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
STAU1-207ENST00000371856 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
STAU1-207ENST00000371856 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.16
STAU1-207ENST00000371856 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
STAU1-207ENST00000371856 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
STAU1-207ENST00000371856 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
STAU1-207ENST00000371856 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
STAU1-207ENST00000371856 NPM2Q86SE8 214 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms