RNA–Protein interactions for RNA: ENST00000591051.1

NPC1-210, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-210ENST00000591051 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
NPC1-210ENST00000591051 CCDC180Q9P1Z9 1646 aa17.3■□□□□ 0.36
NPC1-210ENST00000591051 ABCC9O60706 1549 aa16.79■□□□□ 0.28
NPC1-210ENST00000591051 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
NPC1-210ENST00000591051 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
NPC1-210ENST00000591051 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
NPC1-210ENST00000591051 NACADO15069 1562 aa16.21■□□□□ 0.19
NPC1-210ENST00000591051 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
NPC1-210ENST00000591051 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
NPC1-210ENST00000591051 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
NPC1-210ENST00000591051 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
NPC1-210ENST00000591051 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
NPC1-210ENST00000591051 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
NPC1-210ENST00000591051 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
NPC1-210ENST00000591051 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
NPC1-210ENST00000591051 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
NPC1-210ENST00000591051 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
NPC1-210ENST00000591051 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.04
NPC1-210ENST00000591051 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
NPC1-210ENST00000591051 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
NPC1-210ENST00000591051 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
NPC1-210ENST00000591051 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
NPC1-210ENST00000591051 HRCP23327 699 aa15.18■□□□□ 0.02
NPC1-210ENST00000591051 WIZO95785 1651 aa15.16■□□□□ 0.02
NPC1-210ENST00000591051 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
NPC1-210ENST00000591051 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
NPC1-210ENST00000591051 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
NPC1-210ENST00000591051 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
NPC1-210ENST00000591051 SMARCA2P51531 1590 aa15.03■□□□□ -0
NPC1-210ENST00000591051 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
NPC1-210ENST00000591051 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
NPC1-210ENST00000591051 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
NPC1-210ENST00000591051 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
NPC1-210ENST00000591051 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
NPC1-210ENST00000591051 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
NPC1-210ENST00000591051 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
NPC1-210ENST00000591051 NESP48681 1621 aa14.65□□□□□ -0.06
NPC1-210ENST00000591051 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
NPC1-210ENST00000591051 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
NPC1-210ENST00000591051 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
NPC1-210ENST00000591051 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
NPC1-210ENST00000591051 CFTRP13569 1480 aa14.58□□□□□ -0.07
NPC1-210ENST00000591051 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.09
NPC1-210ENST00000591051 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
NPC1-210ENST00000591051 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
NPC1-210ENST00000591051 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
NPC1-210ENST00000591051 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
NPC1-210ENST00000591051 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
NPC1-210ENST00000591051 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
NPC1-210ENST00000591051 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
NPC1-210ENST00000591051 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
NPC1-210ENST00000591051 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
NPC1-210ENST00000591051 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
NPC1-210ENST00000591051 CUX1P39880 1505 aa14.31□□□□□ -0.12
NPC1-210ENST00000591051 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
NPC1-210ENST00000591051 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
NPC1-210ENST00000591051 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.13
NPC1-210ENST00000591051 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
NPC1-210ENST00000591051 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
NPC1-210ENST00000591051 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
NPC1-210ENST00000591051 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
NPC1-210ENST00000591051 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
NPC1-210ENST00000591051 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
NPC1-210ENST00000591051 WDR62O43379 1518 aa14.2□□□□□ -0.14
NPC1-210ENST00000591051 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
NPC1-210ENST00000591051 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
NPC1-210ENST00000591051 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
NPC1-210ENST00000591051 SOGA1O94964 1423 aa14.14□□□□□ -0.15
NPC1-210ENST00000591051 CUX2O14529 1486 aa14.13□□□□□ -0.15
NPC1-210ENST00000591051 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
NPC1-210ENST00000591051 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
NPC1-210ENST00000591051 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
NPC1-210ENST00000591051 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
NPC1-210ENST00000591051 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
NPC1-210ENST00000591051 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
NPC1-210ENST00000591051 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
NPC1-210ENST00000591051 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.161e-6■■■■□ 25.2
NPC1-210ENST00000591051 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
NPC1-210ENST00000591051 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
NPC1-210ENST00000591051 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
NPC1-210ENST00000591051 CCER1Q8TC90 406 aaPredicted RBP13.97□□□□□ -0.17
NPC1-210ENST00000591051 GAPVD1Q14C86 1478 aa13.96□□□□□ -0.17
NPC1-210ENST00000591051 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
NPC1-210ENST00000591051 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
NPC1-210ENST00000591051 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
NPC1-210ENST00000591051 IGF1RP08069 1367 aa13.93□□□□□ -0.18
NPC1-210ENST00000591051 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
NPC1-210ENST00000591051 EEA1Q15075 1411 aa13.93□□□□□ -0.18
NPC1-210ENST00000591051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
NPC1-210ENST00000591051 TNIKQ9UKE5 1360 aa13.9□□□□□ -0.18
NPC1-210ENST00000591051 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
NPC1-210ENST00000591051 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
NPC1-210ENST00000591051 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
NPC1-210ENST00000591051 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
NPC1-210ENST00000591051 SNAPC4Q5SXM2 1469 aa13.86□□□□□ -0.19
NPC1-210ENST00000591051 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
NPC1-210ENST00000591051 DIEXFQ68CQ4 756 aaKnown RBP13.85□□□□□ -0.19
NPC1-210ENST00000591051 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
NPC1-210ENST00000591051 FBLN2P98095 1184 aa13.84□□□□□ -0.19
NPC1-210ENST00000591051 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms