RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
RPGR-206ENST00000474584 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
RPGR-206ENST00000474584 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
RPGR-206ENST00000474584 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
RPGR-206ENST00000474584 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
RPGR-206ENST00000474584 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
RPGR-206ENST00000474584 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
RPGR-206ENST00000474584 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
RPGR-206ENST00000474584 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
RPGR-206ENST00000474584 HRCP23327 699 aa23.17■■□□□ 1.3
RPGR-206ENST00000474584 ABCC9O60706 1549 aa23.17■■□□□ 1.3
RPGR-206ENST00000474584 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
RPGR-206ENST00000474584 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
RPGR-206ENST00000474584 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
RPGR-206ENST00000474584 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
RPGR-206ENST00000474584 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
RPGR-206ENST00000474584 NACADO15069 1562 aa22.66■■□□□ 1.22
RPGR-206ENST00000474584 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
RPGR-206ENST00000474584 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
RPGR-206ENST00000474584 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
RPGR-206ENST00000474584 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
RPGR-206ENST00000474584 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
RPGR-206ENST00000474584 WIZO95785 1651 aa22.34■■□□□ 1.17
RPGR-206ENST00000474584 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
RPGR-206ENST00000474584 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
RPGR-206ENST00000474584 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
RPGR-206ENST00000474584 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
RPGR-206ENST00000474584 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
RPGR-206ENST00000474584 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
RPGR-206ENST00000474584 SMARCA4P51532 1647 aa22■■□□□ 1.11
RPGR-206ENST00000474584 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
RPGR-206ENST00000474584 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
RPGR-206ENST00000474584 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
RPGR-206ENST00000474584 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
RPGR-206ENST00000474584 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
RPGR-206ENST00000474584 EEA1Q15075 1411 aa21.69■■□□□ 1.06
RPGR-206ENST00000474584 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
RPGR-206ENST00000474584 SOGA1O94964 1423 aa21.64■■□□□ 1.05
RPGR-206ENST00000474584 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
RPGR-206ENST00000474584 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
RPGR-206ENST00000474584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
RPGR-206ENST00000474584 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
RPGR-206ENST00000474584 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
RPGR-206ENST00000474584 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
RPGR-206ENST00000474584 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
RPGR-206ENST00000474584 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
RPGR-206ENST00000474584 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
RPGR-206ENST00000474584 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
RPGR-206ENST00000474584 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
RPGR-206ENST00000474584 KIF21BO75037 1637 aa21.41■■□□□ 1.02
RPGR-206ENST00000474584 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
RPGR-206ENST00000474584 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
RPGR-206ENST00000474584 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
RPGR-206ENST00000474584 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
RPGR-206ENST00000474584 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
RPGR-206ENST00000474584 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
RPGR-206ENST00000474584 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
RPGR-206ENST00000474584 CLIP1P30622 1438 aa21.25■□□□□ 0.99
RPGR-206ENST00000474584 VPS8Q8N3P4 1428 aa21.2■□□□□ 0.98
RPGR-206ENST00000474584 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
RPGR-206ENST00000474584 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
RPGR-206ENST00000474584 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
RPGR-206ENST00000474584 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
RPGR-206ENST00000474584 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
RPGR-206ENST00000474584 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
RPGR-206ENST00000474584 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
RPGR-206ENST00000474584 APLP2Q06481 763 aa21.09■□□□□ 0.97
RPGR-206ENST00000474584 HNRNPUL2Q1KMD3 747 aaKnown RBP21.04■□□□□ 0.96
RPGR-206ENST00000474584 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
RPGR-206ENST00000474584 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
RPGR-206ENST00000474584 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
RPGR-206ENST00000474584 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
RPGR-206ENST00000474584 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
RPGR-206ENST00000474584 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
RPGR-206ENST00000474584 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
RPGR-206ENST00000474584 CUX1P39880 1505 aa20.87■□□□□ 0.93
RPGR-206ENST00000474584 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
RPGR-206ENST00000474584 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
RPGR-206ENST00000474584 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
RPGR-206ENST00000474584 CFTRP13569 1480 aa20.78■□□□□ 0.92
RPGR-206ENST00000474584 MIER1Q8N108 512 aa20.75■□□□□ 0.91
RPGR-206ENST00000474584 YTHDC1Q96MU7 727 aaKnown RBP20.74■□□□□ 0.91
RPGR-206ENST00000474584 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
RPGR-206ENST00000474584 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
RPGR-206ENST00000474584 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
RPGR-206ENST00000474584 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
RPGR-206ENST00000474584 CUX2O14529 1486 aa20.63■□□□□ 0.89
RPGR-206ENST00000474584 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
RPGR-206ENST00000474584 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
RPGR-206ENST00000474584 TIAM1Q13009 1591 aa20.53■□□□□ 0.88
RPGR-206ENST00000474584 IGF1RP08069 1367 aa20.52■□□□□ 0.88
RPGR-206ENST00000474584 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
RPGR-206ENST00000474584 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
RPGR-206ENST00000474584 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
RPGR-206ENST00000474584 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
RPGR-206ENST00000474584 ITGAEP38570 1179 aa20.43■□□□□ 0.86
RPGR-206ENST00000474584 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
RPGR-206ENST00000474584 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
RPGR-206ENST00000474584 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
RPGR-206ENST00000474584 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms