RNA–Protein interactions for RNA: ENST00000371828.7

STAU1-206, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-206ENST00000371828 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.78
STAU1-206ENST00000371828 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
STAU1-206ENST00000371828 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
STAU1-206ENST00000371828 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
STAU1-206ENST00000371828 ABCC9O60706 1549 aa16.83■□□□□ 0.28
STAU1-206ENST00000371828 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
STAU1-206ENST00000371828 HRCP23327 699 aa16.68■□□□□ 0.26
STAU1-206ENST00000371828 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
STAU1-206ENST00000371828 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
STAU1-206ENST00000371828 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
STAU1-206ENST00000371828 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
STAU1-206ENST00000371828 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
STAU1-206ENST00000371828 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
STAU1-206ENST00000371828 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
STAU1-206ENST00000371828 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
STAU1-206ENST00000371828 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
STAU1-206ENST00000371828 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
STAU1-206ENST00000371828 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
STAU1-206ENST00000371828 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
STAU1-206ENST00000371828 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
STAU1-206ENST00000371828 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.13
STAU1-206ENST00000371828 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
STAU1-206ENST00000371828 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
STAU1-206ENST00000371828 NACADO15069 1562 aa15.72■□□□□ 0.11
STAU1-206ENST00000371828 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
STAU1-206ENST00000371828 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
STAU1-206ENST00000371828 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
STAU1-206ENST00000371828 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
STAU1-206ENST00000371828 WIZO95785 1651 aa15.59■□□□□ 0.09
STAU1-206ENST00000371828 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
STAU1-206ENST00000371828 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
STAU1-206ENST00000371828 NEUROD1Q13562 356 aa15.49■□□□□ 0.07
STAU1-206ENST00000371828 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
STAU1-206ENST00000371828 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
STAU1-206ENST00000371828 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
STAU1-206ENST00000371828 MYT1Q01538 1121 aa15.42■□□□□ 0.06
STAU1-206ENST00000371828 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
STAU1-206ENST00000371828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
STAU1-206ENST00000371828 CENPBP07199 599 aaPredicted RBP15.3■□□□□ 0.04
STAU1-206ENST00000371828 ABCC8Q09428 1581 aa15.27■□□□□ 0.04
STAU1-206ENST00000371828 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
STAU1-206ENST00000371828 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
STAU1-206ENST00000371828 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
STAU1-206ENST00000371828 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
STAU1-206ENST00000371828 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
STAU1-206ENST00000371828 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
STAU1-206ENST00000371828 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
STAU1-206ENST00000371828 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
STAU1-206ENST00000371828 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
STAU1-206ENST00000371828 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
STAU1-206ENST00000371828 SOGA1O94964 1423 aa15.06■□□□□ 0
STAU1-206ENST00000371828 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
STAU1-206ENST00000371828 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
STAU1-206ENST00000371828 SMARCA2P51531 1590 aa15.03■□□□□ -0
STAU1-206ENST00000371828 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
STAU1-206ENST00000371828 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
STAU1-206ENST00000371828 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
STAU1-206ENST00000371828 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
STAU1-206ENST00000371828 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
STAU1-206ENST00000371828 MIER1Q8N108 512 aa14.84□□□□□ -0.03
STAU1-206ENST00000371828 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
STAU1-206ENST00000371828 P3H3Q8IVL6 736 aa14.82□□□□□ -0.04
STAU1-206ENST00000371828 NESP48681 1621 aa14.8□□□□□ -0.04
STAU1-206ENST00000371828 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
STAU1-206ENST00000371828 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
STAU1-206ENST00000371828 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
STAU1-206ENST00000371828 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
STAU1-206ENST00000371828 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
STAU1-206ENST00000371828 ITGAEP38570 1179 aa14.69□□□□□ -0.06
STAU1-206ENST00000371828 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
STAU1-206ENST00000371828 CEP162Q5TB80 1403 aa14.65□□□□□ -0.06
STAU1-206ENST00000371828 APLP2Q06481 763 aa14.62□□□□□ -0.07
STAU1-206ENST00000371828 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
STAU1-206ENST00000371828 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
STAU1-206ENST00000371828 ANP32EQ9BTT0 268 aa14.6□□□□□ -0.07
STAU1-206ENST00000371828 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
STAU1-206ENST00000371828 BCANQ96GW7 911 aa14.58□□□□□ -0.08
STAU1-206ENST00000371828 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
STAU1-206ENST00000371828 FBLN2P98095 1184 aa14.57□□□□□ -0.08
STAU1-206ENST00000371828 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
STAU1-206ENST00000371828 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
STAU1-206ENST00000371828 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
STAU1-206ENST00000371828 CUX1P39880 1505 aa14.54□□□□□ -0.08
STAU1-206ENST00000371828 CUX2O14529 1486 aa14.54□□□□□ -0.08
STAU1-206ENST00000371828 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
STAU1-206ENST00000371828 CFTRP13569 1480 aa14.49□□□□□ -0.09
STAU1-206ENST00000371828 CLIP1P30622 1438 aa14.49□□□□□ -0.09
STAU1-206ENST00000371828 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
STAU1-206ENST00000371828 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
STAU1-206ENST00000371828 KANK4Q5T7N3 995 aaPredicted RBP14.45□□□□□ -0.1
STAU1-206ENST00000371828 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
STAU1-206ENST00000371828 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
STAU1-206ENST00000371828 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
STAU1-206ENST00000371828 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
STAU1-206ENST00000371828 TOP2BQ02880 1626 aa14.38□□□□□ -0.11
STAU1-206ENST00000371828 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
STAU1-206ENST00000371828 IGF1RP08069 1367 aa14.35□□□□□ -0.11
STAU1-206ENST00000371828 FKBP8Q14318 412 aa14.32□□□□□ -0.12
STAU1-206ENST00000371828 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
STAU1-206ENST00000371828 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms