RNA–Protein interactions for RNA: ENST00000569098.1

TNRC6A-216, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 587 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-216ENST00000569098 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
TNRC6A-216ENST00000569098 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
TNRC6A-216ENST00000569098 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
TNRC6A-216ENST00000569098 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
TNRC6A-216ENST00000569098 FOXD1Q16676 465 aa16.89■□□□□ 0.29
TNRC6A-216ENST00000569098 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
TNRC6A-216ENST00000569098 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
TNRC6A-216ENST00000569098 ADRA2BP18089 450 aa16.08■□□□□ 0.16
TNRC6A-216ENST00000569098 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
TNRC6A-216ENST00000569098 MSH5O43196 834 aa15.59■□□□□ 0.09
TNRC6A-216ENST00000569098 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
TNRC6A-216ENST00000569098 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
TNRC6A-216ENST00000569098 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
TNRC6A-216ENST00000569098 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
TNRC6A-216ENST00000569098 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
TNRC6A-216ENST00000569098 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
TNRC6A-216ENST00000569098 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
TNRC6A-216ENST00000569098 KCNA4P22459 653 aa14.21□□□□□ -0.13
TNRC6A-216ENST00000569098 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
TNRC6A-216ENST00000569098 RNF216Q9NWF9 866 aaPredicted RBP14.12□□□□□ -0.15
TNRC6A-216ENST00000569098 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
TNRC6A-216ENST00000569098 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
TNRC6A-216ENST00000569098 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
TNRC6A-216ENST00000569098 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
TNRC6A-216ENST00000569098 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
TNRC6A-216ENST00000569098 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
TNRC6A-216ENST00000569098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNRC6A-216ENST00000569098 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-216ENST00000569098 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-216ENST00000569098 ZBTB22O15209 634 aa13.12□□□□□ -0.31
TNRC6A-216ENST00000569098 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
TNRC6A-216ENST00000569098 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
TNRC6A-216ENST00000569098 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
TNRC6A-216ENST00000569098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
TNRC6A-216ENST00000569098 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
TNRC6A-216ENST00000569098 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-216ENST00000569098 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
TNRC6A-216ENST00000569098 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
TNRC6A-216ENST00000569098 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
TNRC6A-216ENST00000569098 APLP2Q06481 763 aa12.8□□□□□ -0.36
TNRC6A-216ENST00000569098 CAPN15O75808 1086 aa12.78□□□□□ -0.36
TNRC6A-216ENST00000569098 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
TNRC6A-216ENST00000569098 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
TNRC6A-216ENST00000569098 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
TNRC6A-216ENST00000569098 DSG3P32926 999 aa12.68□□□□□ -0.38
TNRC6A-216ENST00000569098 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
TNRC6A-216ENST00000569098 ABCB7O75027 752 aa12.54□□□□□ -0.4
TNRC6A-216ENST00000569098 POLA2Q14181 598 aa12.47□□□□□ -0.41
TNRC6A-216ENST00000569098 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
TNRC6A-216ENST00000569098 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-216ENST00000569098 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
TNRC6A-216ENST00000569098 FBLN2P98095 1184 aa12.09□□□□□ -0.47
TNRC6A-216ENST00000569098 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
TNRC6A-216ENST00000569098 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
TNRC6A-216ENST00000569098 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
TNRC6A-216ENST00000569098 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
TNRC6A-216ENST00000569098 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
TNRC6A-216ENST00000569098 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
TNRC6A-216ENST00000569098 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
TNRC6A-216ENST00000569098 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
TNRC6A-216ENST00000569098 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
TNRC6A-216ENST00000569098 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
TNRC6A-216ENST00000569098 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.545e-7■□□□□ 8
TNRC6A-216ENST00000569098 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
TNRC6A-216ENST00000569098 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
TNRC6A-216ENST00000569098 PROM2Q8N271 834 aa11.62□□□□□ -0.55
TNRC6A-216ENST00000569098 FKBP8Q14318 412 aa11.59□□□□□ -0.55
TNRC6A-216ENST00000569098 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
TNRC6A-216ENST00000569098 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
TNRC6A-216ENST00000569098 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNRC6A-216ENST00000569098 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
TNRC6A-216ENST00000569098 POTEHQ6S545 545 aa11.44□□□□□ -0.58
TNRC6A-216ENST00000569098 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
TNRC6A-216ENST00000569098 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
TNRC6A-216ENST00000569098 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
TNRC6A-216ENST00000569098 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
TNRC6A-216ENST00000569098 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
TNRC6A-216ENST00000569098 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
TNRC6A-216ENST00000569098 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
TNRC6A-216ENST00000569098 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-216ENST00000569098 MIER1Q8N108 512 aa11.12□□□□□ -0.63
TNRC6A-216ENST00000569098 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
TNRC6A-216ENST00000569098 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
TNRC6A-216ENST00000569098 HAX1O00165 279 aa11.07□□□□□ -0.64
TNRC6A-216ENST00000569098 EVX2Q03828 476 aa11.06□□□□□ -0.64
TNRC6A-216ENST00000569098 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
TNRC6A-216ENST00000569098 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
TNRC6A-216ENST00000569098 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
TNRC6A-216ENST00000569098 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
TNRC6A-216ENST00000569098 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
TNRC6A-216ENST00000569098 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
TNRC6A-216ENST00000569098 NUBP1P53384 320 aa10.93□□□□□ -0.66
TNRC6A-216ENST00000569098 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
TNRC6A-216ENST00000569098 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
TNRC6A-216ENST00000569098 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
TNRC6A-216ENST00000569098 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
TNRC6A-216ENST00000569098 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
TNRC6A-216ENST00000569098 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
TNRC6A-216ENST00000569098 TSPYL2Q9H2G4 693 aaPredicted RBP10.83□□□□□ -0.68
TNRC6A-216ENST00000569098 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms