RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
PPP1R3E-204ENST00000559942 ABCC9O60706 1549 aa24.23■■□□□ 1.47
PPP1R3E-204ENST00000559942 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
PPP1R3E-204ENST00000559942 DNAJC5Q9H3Z4 198 aa23.14■■□□□ 1.29
PPP1R3E-204ENST00000559942 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
PPP1R3E-204ENST00000559942 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
PPP1R3E-204ENST00000559942 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.176e-6■■□□□ 12.8
PPP1R3E-204ENST00000559942 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
PPP1R3E-204ENST00000559942 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
PPP1R3E-204ENST00000559942 NACADO15069 1562 aa21.91■■□□□ 1.1
PPP1R3E-204ENST00000559942 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
PPP1R3E-204ENST00000559942 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
PPP1R3E-204ENST00000559942 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
PPP1R3E-204ENST00000559942 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
PPP1R3E-204ENST00000559942 CUX2O14529 1486 aa21.45■■□□□ 1.02
PPP1R3E-204ENST00000559942 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
PPP1R3E-204ENST00000559942 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
PPP1R3E-204ENST00000559942 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
PPP1R3E-204ENST00000559942 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
PPP1R3E-204ENST00000559942 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
PPP1R3E-204ENST00000559942 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3E-204ENST00000559942 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
PPP1R3E-204ENST00000559942 NESP48681 1621 aa20.4■□□□□ 0.86
PPP1R3E-204ENST00000559942 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
PPP1R3E-204ENST00000559942 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
PPP1R3E-204ENST00000559942 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
PPP1R3E-204ENST00000559942 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
PPP1R3E-204ENST00000559942 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
PPP1R3E-204ENST00000559942 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
PPP1R3E-204ENST00000559942 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
PPP1R3E-204ENST00000559942 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
PPP1R3E-204ENST00000559942 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
PPP1R3E-204ENST00000559942 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
PPP1R3E-204ENST00000559942 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
PPP1R3E-204ENST00000559942 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
PPP1R3E-204ENST00000559942 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
PPP1R3E-204ENST00000559942 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
PPP1R3E-204ENST00000559942 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
PPP1R3E-204ENST00000559942 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
PPP1R3E-204ENST00000559942 WDR62O43379 1518 aa19.84■□□□□ 0.77
PPP1R3E-204ENST00000559942 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
PPP1R3E-204ENST00000559942 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
PPP1R3E-204ENST00000559942 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
PPP1R3E-204ENST00000559942 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
PPP1R3E-204ENST00000559942 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
PPP1R3E-204ENST00000559942 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
PPP1R3E-204ENST00000559942 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PPP1R3E-204ENST00000559942 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
PPP1R3E-204ENST00000559942 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
PPP1R3E-204ENST00000559942 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
PPP1R3E-204ENST00000559942 CHD1O14646 1710 aa19.22■□□□□ 0.67
PPP1R3E-204ENST00000559942 FBLN2P98095 1184 aa19.18■□□□□ 0.66
PPP1R3E-204ENST00000559942 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
PPP1R3E-204ENST00000559942 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
PPP1R3E-204ENST00000559942 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
PPP1R3E-204ENST00000559942 CFTRP13569 1480 aa19.04■□□□□ 0.64
PPP1R3E-204ENST00000559942 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
PPP1R3E-204ENST00000559942 FBXO41Q8TF61 875 aa19.02■□□□□ 0.64
PPP1R3E-204ENST00000559942 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
PPP1R3E-204ENST00000559942 ERCC6L2Q5T890 1561 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
PPP1R3E-204ENST00000559942 SOCS7O14512 581 aa18.87■□□□□ 0.61
PPP1R3E-204ENST00000559942 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
PPP1R3E-204ENST00000559942 SYNJ1O43426 1573 aa18.83■□□□□ 0.6
PPP1R3E-204ENST00000559942 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
PPP1R3E-204ENST00000559942 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
PPP1R3E-204ENST00000559942 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
PPP1R3E-204ENST00000559942 WIZO95785 1651 aa18.76■□□□□ 0.59
PPP1R3E-204ENST00000559942 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
PPP1R3E-204ENST00000559942 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
PPP1R3E-204ENST00000559942 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
PPP1R3E-204ENST00000559942 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
PPP1R3E-204ENST00000559942 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
PPP1R3E-204ENST00000559942 KDM6BO15054 1643 aa18.67■□□□□ 0.58
PPP1R3E-204ENST00000559942 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
PPP1R3E-204ENST00000559942 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
PPP1R3E-204ENST00000559942 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
PPP1R3E-204ENST00000559942 ADGRL1O94910 1474 aa18.62■□□□□ 0.57
PPP1R3E-204ENST00000559942 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
PPP1R3E-204ENST00000559942 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.56
PPP1R3E-204ENST00000559942 DISP3Q9P2K9 1392 aa18.56■□□□□ 0.56
PPP1R3E-204ENST00000559942 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
PPP1R3E-204ENST00000559942 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
PPP1R3E-204ENST00000559942 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
PPP1R3E-204ENST00000559942 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
PPP1R3E-204ENST00000559942 SOGA1O94964 1423 aa18.47■□□□□ 0.55
PPP1R3E-204ENST00000559942 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
PPP1R3E-204ENST00000559942 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
PPP1R3E-204ENST00000559942 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
PPP1R3E-204ENST00000559942 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
PPP1R3E-204ENST00000559942 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
PPP1R3E-204ENST00000559942 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PPP1R3E-204ENST00000559942 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
PPP1R3E-204ENST00000559942 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PPP1R3E-204ENST00000559942 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms