RNA–Protein interactions for RNA: ENST00000560073.5

PPP1R3E-205, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 5

Gene PPP1R3E, Length 444 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-205ENST00000560073 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
PPP1R3E-205ENST00000560073 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
PPP1R3E-205ENST00000560073 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
PPP1R3E-205ENST00000560073 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
PPP1R3E-205ENST00000560073 FOXD1Q16676 465 aa13.46□□□□□ -0.25
PPP1R3E-205ENST00000560073 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
PPP1R3E-205ENST00000560073 MSH5O43196 834 aa12.63□□□□□ -0.39
PPP1R3E-205ENST00000560073 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
PPP1R3E-205ENST00000560073 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
PPP1R3E-205ENST00000560073 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
PPP1R3E-205ENST00000560073 ADRA2BP18089 450 aa12.38□□□□□ -0.43
PPP1R3E-205ENST00000560073 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
PPP1R3E-205ENST00000560073 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
PPP1R3E-205ENST00000560073 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
PPP1R3E-205ENST00000560073 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
PPP1R3E-205ENST00000560073 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
PPP1R3E-205ENST00000560073 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
PPP1R3E-205ENST00000560073 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
PPP1R3E-205ENST00000560073 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
PPP1R3E-205ENST00000560073 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
PPP1R3E-205ENST00000560073 RNF216Q9NWF9 866 aaPredicted RBP10.76□□□□□ -0.69
PPP1R3E-205ENST00000560073 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
PPP1R3E-205ENST00000560073 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
PPP1R3E-205ENST00000560073 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
PPP1R3E-205ENST00000560073 NCBP3Q53F19 620 aaKnown RBP10.44□□□□□ -0.74
PPP1R3E-205ENST00000560073 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
PPP1R3E-205ENST00000560073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.755e-7■□□□□ 9.5
PPP1R3E-205ENST00000560073 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
PPP1R3E-205ENST00000560073 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
PPP1R3E-205ENST00000560073 DSG3P32926 999 aa10.04□□□□□ -0.8
PPP1R3E-205ENST00000560073 CAPN15O75808 1086 aa10□□□□□ -0.81
PPP1R3E-205ENST00000560073 KCNA4P22459 653 aa9.97□□□□□ -0.81
PPP1R3E-205ENST00000560073 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
PPP1R3E-205ENST00000560073 POTEHQ6S545 545 aa9.9□□□□□ -0.82
PPP1R3E-205ENST00000560073 TRHP20396 242 aaPredicted RBP9.81□□□□□ -0.84
PPP1R3E-205ENST00000560073 ABCB7O75027 752 aa9.78□□□□□ -0.84
PPP1R3E-205ENST00000560073 APLP2Q06481 763 aa9.77□□□□□ -0.85
PPP1R3E-205ENST00000560073 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
PPP1R3E-205ENST00000560073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.73□□□□□ -0.85
PPP1R3E-205ENST00000560073 HNRNPUL2Q1KMD3 747 aaKnown RBP9.73□□□□□ -0.85
PPP1R3E-205ENST00000560073 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
PPP1R3E-205ENST00000560073 MYCNP04198 464 aaPredicted RBP9.54□□□□□ -0.88
PPP1R3E-205ENST00000560073 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
PPP1R3E-205ENST00000560073 POLA2Q14181 598 aa9.51□□□□□ -0.89
PPP1R3E-205ENST00000560073 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
PPP1R3E-205ENST00000560073 ATF5Q9Y2D1 282 aaPredicted RBP9.39□□□□□ -0.91
PPP1R3E-205ENST00000560073 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
PPP1R3E-205ENST00000560073 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
PPP1R3E-205ENST00000560073 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
PPP1R3E-205ENST00000560073 CCDC180Q9P1Z9 1646 aa9.28□□□□□ -0.92
PPP1R3E-205ENST00000560073 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
PPP1R3E-205ENST00000560073 ABCC9O60706 1549 aa9.23□□□□□ -0.93
PPP1R3E-205ENST00000560073 REM2Q8IYK8 340 aaPredicted RBP9.22□□□□□ -0.93
PPP1R3E-205ENST00000560073 OSCARQ8IYS5 282 aa9.22□□□□□ -0.93
PPP1R3E-205ENST00000560073 ZBTB22O15209 634 aa9.19□□□□□ -0.94
PPP1R3E-205ENST00000560073 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
PPP1R3E-205ENST00000560073 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
PPP1R3E-205ENST00000560073 PITPNM1O00562 1244 aa9.13□□□□□ -0.95
PPP1R3E-205ENST00000560073 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
PPP1R3E-205ENST00000560073 ATXN8OSP0DMR3 200 aa9.07□□□□□ -0.96
PPP1R3E-205ENST00000560073 HAX1O00165 279 aa9.04□□□□□ -0.96
PPP1R3E-205ENST00000560073 SPDYE2BA6NHP3 402 aa8.99□□□□□ -0.97
PPP1R3E-205ENST00000560073 SPDYE6P0CI01 402 aa8.99□□□□□ -0.97
PPP1R3E-205ENST00000560073 SPDYE2Q495Y8 402 aa8.99□□□□□ -0.97
PPP1R3E-205ENST00000560073 EVX2Q03828 476 aa8.97□□□□□ -0.97
PPP1R3E-205ENST00000560073 DCAF8L2P0C7V8 631 aa8.96□□□□□ -0.98
PPP1R3E-205ENST00000560073 FBLN2P98095 1184 aa8.96□□□□□ -0.98
PPP1R3E-205ENST00000560073 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
PPP1R3E-205ENST00000560073 PRKAR2AP13861 404 aaKnown RBP8.88□□□□□ -0.99
PPP1R3E-205ENST00000560073 SPDYE1Q8NFV5 336 aaPredicted RBP8.88□□□□□ -0.99
PPP1R3E-205ENST00000560073 SSUH2Q9Y2M2 353 aa8.88□□□□□ -0.99
PPP1R3E-205ENST00000560073 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
PPP1R3E-205ENST00000560073 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
PPP1R3E-205ENST00000560073 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
PPP1R3E-205ENST00000560073 RB1CC1Q8TDY2 1594 aa8.81□□□□□ -1
PPP1R3E-205ENST00000560073 NACADO15069 1562 aa8.8□□□□□ -1
PPP1R3E-205ENST00000560073 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
PPP1R3E-205ENST00000560073 ZCCHC6Q5VYS8 1495 aaKnown RBP8.75□□□□□ -1.01
PPP1R3E-205ENST00000560073 GABBR2O75899 941 aa8.73□□□□□ -1.01
PPP1R3E-205ENST00000560073 MYO15BQ96JP2 1530 aa8.73□□□□□ -1.01
PPP1R3E-205ENST00000560073 PABPN1Q86U42 306 aaKnown RBP eCLIP8.72□□□□□ -1.016e-6■■□□□ 12.8
PPP1R3E-205ENST00000560073 PRR29P0C7W0 189 aa8.7□□□□□ -1.02
PPP1R3E-205ENST00000560073 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
PPP1R3E-205ENST00000560073 LHX8Q68G74 356 aa8.61□□□□□ -1.03
PPP1R3E-205ENST00000560073 FARP1Q9Y4F1 1045 aaPredicted RBP8.59□□□□□ -1.03
PPP1R3E-205ENST00000560073 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
PPP1R3E-205ENST00000560073 POTEIP0CG38 1075 aa8.57□□□□□ -1.04
PPP1R3E-205ENST00000560073 CSRNP3Q8WYN3 585 aa8.57□□□□□ -1.04
PPP1R3E-205ENST00000560073 SCRIBQ14160 1630 aa8.54□□□□□ -1.04
PPP1R3E-205ENST00000560073 BICRAQ9NZM4 1560 aa8.52□□□□□ -1.04
PPP1R3E-205ENST00000560073 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
PPP1R3E-205ENST00000560073 CLCN6P51797 869 aa8.49□□□□□ -1.05
PPP1R3E-205ENST00000560073 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
PPP1R3E-205ENST00000560073 ZNF579Q8NAF0 562 aaKnown RBP8.45□□□□□ -1.06
PPP1R3E-205ENST00000560073 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
PPP1R3E-205ENST00000560073 ZRANB1Q9UGI0 708 aa8.43□□□□□ -1.06
PPP1R3E-205ENST00000560073 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
PPP1R3E-205ENST00000560073 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
PPP1R3E-205ENST00000560073 GALR2O43603 387 aaPredicted RBP8.38□□□□□ -1.07
PPP1R3E-205ENST00000560073 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms