RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
PPP1R3E-202ENST00000558058 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
PPP1R3E-202ENST00000558058 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
PPP1R3E-202ENST00000558058 ABCC9O60706 1549 aa19.73■□□□□ 0.75
PPP1R3E-202ENST00000558058 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
PPP1R3E-202ENST00000558058 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PPP1R3E-202ENST00000558058 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
PPP1R3E-202ENST00000558058 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
PPP1R3E-202ENST00000558058 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
PPP1R3E-202ENST00000558058 NACADO15069 1562 aa18.87■□□□□ 0.61
PPP1R3E-202ENST00000558058 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
PPP1R3E-202ENST00000558058 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.66e-6■■□□□ 12.8
PPP1R3E-202ENST00000558058 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
PPP1R3E-202ENST00000558058 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
PPP1R3E-202ENST00000558058 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
PPP1R3E-202ENST00000558058 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
PPP1R3E-202ENST00000558058 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
PPP1R3E-202ENST00000558058 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
PPP1R3E-202ENST00000558058 WIZO95785 1651 aa18.05■□□□□ 0.48
PPP1R3E-202ENST00000558058 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
PPP1R3E-202ENST00000558058 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PPP1R3E-202ENST00000558058 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
PPP1R3E-202ENST00000558058 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
PPP1R3E-202ENST00000558058 ATAD2BQ9ULI0 1458 aa17.76■□□□□ 0.43
PPP1R3E-202ENST00000558058 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
PPP1R3E-202ENST00000558058 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
PPP1R3E-202ENST00000558058 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
PPP1R3E-202ENST00000558058 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
PPP1R3E-202ENST00000558058 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
PPP1R3E-202ENST00000558058 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
PPP1R3E-202ENST00000558058 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
PPP1R3E-202ENST00000558058 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
PPP1R3E-202ENST00000558058 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
PPP1R3E-202ENST00000558058 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
PPP1R3E-202ENST00000558058 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
PPP1R3E-202ENST00000558058 HRCP23327 699 aa17.44■□□□□ 0.38
PPP1R3E-202ENST00000558058 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
PPP1R3E-202ENST00000558058 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
PPP1R3E-202ENST00000558058 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
PPP1R3E-202ENST00000558058 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
PPP1R3E-202ENST00000558058 NESP48681 1621 aa17.28■□□□□ 0.36
PPP1R3E-202ENST00000558058 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
PPP1R3E-202ENST00000558058 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
PPP1R3E-202ENST00000558058 CFTRP13569 1480 aa17.16■□□□□ 0.34
PPP1R3E-202ENST00000558058 SOGA1O94964 1423 aa17.11■□□□□ 0.33
PPP1R3E-202ENST00000558058 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
PPP1R3E-202ENST00000558058 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
PPP1R3E-202ENST00000558058 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
PPP1R3E-202ENST00000558058 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
PPP1R3E-202ENST00000558058 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
PPP1R3E-202ENST00000558058 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.31
PPP1R3E-202ENST00000558058 CUX1P39880 1505 aa16.98■□□□□ 0.31
PPP1R3E-202ENST00000558058 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
PPP1R3E-202ENST00000558058 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
PPP1R3E-202ENST00000558058 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
PPP1R3E-202ENST00000558058 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
PPP1R3E-202ENST00000558058 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
PPP1R3E-202ENST00000558058 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
PPP1R3E-202ENST00000558058 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
PPP1R3E-202ENST00000558058 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
PPP1R3E-202ENST00000558058 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
PPP1R3E-202ENST00000558058 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
PPP1R3E-202ENST00000558058 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.29
PPP1R3E-202ENST00000558058 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
PPP1R3E-202ENST00000558058 CUX2O14529 1486 aa16.81■□□□□ 0.28
PPP1R3E-202ENST00000558058 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
PPP1R3E-202ENST00000558058 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
PPP1R3E-202ENST00000558058 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
PPP1R3E-202ENST00000558058 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
PPP1R3E-202ENST00000558058 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
PPP1R3E-202ENST00000558058 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.27
PPP1R3E-202ENST00000558058 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PPP1R3E-202ENST00000558058 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
PPP1R3E-202ENST00000558058 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
PPP1R3E-202ENST00000558058 EEA1Q15075 1411 aa16.67■□□□□ 0.26
PPP1R3E-202ENST00000558058 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
PPP1R3E-202ENST00000558058 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
PPP1R3E-202ENST00000558058 IGF1RP08069 1367 aa16.63■□□□□ 0.25
PPP1R3E-202ENST00000558058 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
PPP1R3E-202ENST00000558058 FBLN2P98095 1184 aa16.61■□□□□ 0.25
PPP1R3E-202ENST00000558058 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
PPP1R3E-202ENST00000558058 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
PPP1R3E-202ENST00000558058 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.25
PPP1R3E-202ENST00000558058 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.25
PPP1R3E-202ENST00000558058 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
PPP1R3E-202ENST00000558058 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
PPP1R3E-202ENST00000558058 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
PPP1R3E-202ENST00000558058 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
PPP1R3E-202ENST00000558058 CLIP1P30622 1438 aa16.48■□□□□ 0.23
PPP1R3E-202ENST00000558058 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
PPP1R3E-202ENST00000558058 WDR62O43379 1518 aa16.48■□□□□ 0.23
PPP1R3E-202ENST00000558058 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
PPP1R3E-202ENST00000558058 KIF21BO75037 1637 aa16.46■□□□□ 0.23
PPP1R3E-202ENST00000558058 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
PPP1R3E-202ENST00000558058 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
PPP1R3E-202ENST00000558058 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
PPP1R3E-202ENST00000558058 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
PPP1R3E-202ENST00000558058 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
PPP1R3E-202ENST00000558058 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PPP1R3E-202ENST00000558058 MYT1Q01538 1121 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms