RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
SEC24C-202ENST00000345254 NISCHQ9Y2I1 1504 aa18■□□□□ 0.47
SEC24C-202ENST00000345254 ABCC9O60706 1549 aa16.5■□□□□ 0.23
SEC24C-202ENST00000345254 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
SEC24C-202ENST00000345254 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
SEC24C-202ENST00000345254 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC24C-202ENST00000345254 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SEC24C-202ENST00000345254 FAM9AQ8IZU1 332 aaPredicted RBP15.39■□□□□ 0.05
SEC24C-202ENST00000345254 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
SEC24C-202ENST00000345254 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
SEC24C-202ENST00000345254 FBLN2P98095 1184 aa15.15■□□□□ 0.02
SEC24C-202ENST00000345254 ATP1B4Q9UN42 357 aaPredicted RBP15.12■□□□□ 0.01
SEC24C-202ENST00000345254 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
SEC24C-202ENST00000345254 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
SEC24C-202ENST00000345254 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
SEC24C-202ENST00000345254 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
SEC24C-202ENST00000345254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
SEC24C-202ENST00000345254 APLP2Q06481 763 aa14.93□□□□□ -0.02
SEC24C-202ENST00000345254 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
SEC24C-202ENST00000345254 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
SEC24C-202ENST00000345254 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
SEC24C-202ENST00000345254 NACADO15069 1562 aa14.86□□□□□ -0.03
SEC24C-202ENST00000345254 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
SEC24C-202ENST00000345254 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
SEC24C-202ENST00000345254 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
SEC24C-202ENST00000345254 HRCP23327 699 aa14.74□□□□□ -0.05
SEC24C-202ENST00000345254 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
SEC24C-202ENST00000345254 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
SEC24C-202ENST00000345254 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
SEC24C-202ENST00000345254 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
SEC24C-202ENST00000345254 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC24C-202ENST00000345254 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
SEC24C-202ENST00000345254 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
SEC24C-202ENST00000345254 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
SEC24C-202ENST00000345254 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
SEC24C-202ENST00000345254 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.1
SEC24C-202ENST00000345254 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
SEC24C-202ENST00000345254 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
SEC24C-202ENST00000345254 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
SEC24C-202ENST00000345254 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
SEC24C-202ENST00000345254 MYT1Q01538 1121 aa14.25□□□□□ -0.13
SEC24C-202ENST00000345254 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
SEC24C-202ENST00000345254 ITGAEP38570 1179 aa14.23□□□□□ -0.13
SEC24C-202ENST00000345254 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.14
SEC24C-202ENST00000345254 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
SEC24C-202ENST00000345254 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
SEC24C-202ENST00000345254 ESF1Q9H501 851 aaKnown RBP14.19□□□□□ -0.14
SEC24C-202ENST00000345254 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
SEC24C-202ENST00000345254 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
SEC24C-202ENST00000345254 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
SEC24C-202ENST00000345254 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
SEC24C-202ENST00000345254 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
SEC24C-202ENST00000345254 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
SEC24C-202ENST00000345254 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
SEC24C-202ENST00000345254 MYO15BQ96JP2 1530 aa14.09□□□□□ -0.15
SEC24C-202ENST00000345254 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
SEC24C-202ENST00000345254 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
SEC24C-202ENST00000345254 CDK11AQ9UQ88 783 aaPredicted RBP14.04□□□□□ -0.16
SEC24C-202ENST00000345254 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
SEC24C-202ENST00000345254 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
SEC24C-202ENST00000345254 BCANQ96GW7 911 aa14.03□□□□□ -0.16
SEC24C-202ENST00000345254 ARID4BQ4LE39 1312 aaPredicted RBP14.02□□□□□ -0.16
SEC24C-202ENST00000345254 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
SEC24C-202ENST00000345254 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
SEC24C-202ENST00000345254 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
SEC24C-202ENST00000345254 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
SEC24C-202ENST00000345254 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
SEC24C-202ENST00000345254 CC2D2AQ9P2K1 1620 aa13.96□□□□□ -0.18
SEC24C-202ENST00000345254 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
SEC24C-202ENST00000345254 SOGA1O94964 1423 aa13.87□□□□□ -0.19
SEC24C-202ENST00000345254 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
SEC24C-202ENST00000345254 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
SEC24C-202ENST00000345254 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
SEC24C-202ENST00000345254 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
SEC24C-202ENST00000345254 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
SEC24C-202ENST00000345254 NESP48681 1621 aa13.81□□□□□ -0.2
SEC24C-202ENST00000345254 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
SEC24C-202ENST00000345254 MLECQ14165 292 aa13.79□□□□□ -0.2
SEC24C-202ENST00000345254 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
SEC24C-202ENST00000345254 CUX2O14529 1486 aa13.79□□□□□ -0.2
SEC24C-202ENST00000345254 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
SEC24C-202ENST00000345254 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.2
SEC24C-202ENST00000345254 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
SEC24C-202ENST00000345254 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
SEC24C-202ENST00000345254 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
SEC24C-202ENST00000345254 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
SEC24C-202ENST00000345254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.213e-6■■□□□ 14.3
SEC24C-202ENST00000345254 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
SEC24C-202ENST00000345254 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
SEC24C-202ENST00000345254 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
SEC24C-202ENST00000345254 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
SEC24C-202ENST00000345254 WIZO95785 1651 aa13.69□□□□□ -0.22
SEC24C-202ENST00000345254 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
SEC24C-202ENST00000345254 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
SEC24C-202ENST00000345254 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
SEC24C-202ENST00000345254 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
SEC24C-202ENST00000345254 FAM69CQ0P6D2 419 aa13.66□□□□□ -0.22
SEC24C-202ENST00000345254 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
SEC24C-202ENST00000345254 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
SEC24C-202ENST00000345254 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■■ 28.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms