RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
CASD1-201ENST00000297273 DCAF8L2P0C7V8 631 aa32.57■■■□□ 2.8
CASD1-201ENST00000297273 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
CASD1-201ENST00000297273 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
CASD1-201ENST00000297273 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
CASD1-201ENST00000297273 PCGF6Q9BYE7 350 aa30.6■■■□□ 2.49
CASD1-201ENST00000297273 FAM9AQ8IZU1 332 aaPredicted RBP30.26■■■□□ 2.43
CASD1-201ENST00000297273 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
CASD1-201ENST00000297273 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
CASD1-201ENST00000297273 TTBK1Q5TCY1 1321 aaPredicted RBP29.83■■■□□ 2.37
CASD1-201ENST00000297273 PPARGC1BQ86YN6 1023 aaKnown RBP29.82■■■□□ 2.36
CASD1-201ENST00000297273 HRCP23327 699 aa29.55■■■□□ 2.32
CASD1-201ENST00000297273 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
CASD1-201ENST00000297273 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
CASD1-201ENST00000297273 TRIM26Q12899 539 aaPredicted RBP28.96■■■□□ 2.23
CASD1-201ENST00000297273 CCER1Q8TC90 406 aaPredicted RBP28.86■■■□□ 2.21
CASD1-201ENST00000297273 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
CASD1-201ENST00000297273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
CASD1-201ENST00000297273 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
CASD1-201ENST00000297273 YTHDC1Q96MU7 727 aaKnown RBP28.51■■■□□ 2.15
CASD1-201ENST00000297273 ZEB1P37275 1124 aaPredicted RBP28.49■■■□□ 2.15
CASD1-201ENST00000297273 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
CASD1-201ENST00000297273 APLP2Q06481 763 aa28.33■■■□□ 2.13
CASD1-201ENST00000297273 ABCC9O60706 1549 aa28.18■■■□□ 2.1
CASD1-201ENST00000297273 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
CASD1-201ENST00000297273 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
CASD1-201ENST00000297273 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
CASD1-201ENST00000297273 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
CASD1-201ENST00000297273 ITGAEP38570 1179 aa27.91■■■□□ 2.06
CASD1-201ENST00000297273 DIEXFQ68CQ4 756 aaKnown RBP27.87■■■□□ 2.05
CASD1-201ENST00000297273 SCRIBQ14160 1630 aa27.82■■■□□ 2.04
CASD1-201ENST00000297273 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
CASD1-201ENST00000297273 GTF3C3Q9Y5Q9 886 aa27.68■■■□□ 2.02
CASD1-201ENST00000297273 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
CASD1-201ENST00000297273 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
CASD1-201ENST00000297273 CCDC180Q9P1Z9 1646 aa27.5■■□□□ 1.99
CASD1-201ENST00000297273 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
CASD1-201ENST00000297273 NEUROD1Q13562 356 aa27.47■■□□□ 1.99
CASD1-201ENST00000297273 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
CASD1-201ENST00000297273 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
CASD1-201ENST00000297273 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
CASD1-201ENST00000297273 ZNF316A6NFI3 1004 aaPredicted RBP27.22■■□□□ 1.95
CASD1-201ENST00000297273 CNGB1Q14028 1251 aaPredicted RBP27.17■■□□□ 1.94
CASD1-201ENST00000297273 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
CASD1-201ENST00000297273 BCANQ96GW7 911 aa27.08■■□□□ 1.93
CASD1-201ENST00000297273 P3H3Q8IVL6 736 aa27.02■■□□□ 1.92
CASD1-201ENST00000297273 MIER1Q8N108 512 aa27.02■■□□□ 1.92
CASD1-201ENST00000297273 FAM50AQ14320 339 aaKnown RBP26.98■■□□□ 1.91
CASD1-201ENST00000297273 SOGA1O94964 1423 aa26.82■■□□□ 1.88
CASD1-201ENST00000297273 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
CASD1-201ENST00000297273 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
CASD1-201ENST00000297273 HIRIP3Q9BW71 556 aaPredicted RBP26.78■■□□□ 1.88
CASD1-201ENST00000297273 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
CASD1-201ENST00000297273 NEFLP07196 543 aa26.75■■□□□ 1.87
CASD1-201ENST00000297273 ARID3CA6NKF2 412 aa26.71■■□□□ 1.87
CASD1-201ENST00000297273 ABCC8Q09428 1581 aa26.7■■□□□ 1.87
CASD1-201ENST00000297273 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
CASD1-201ENST00000297273 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
CASD1-201ENST00000297273 CLIP1P30622 1438 aa26.54■■□□□ 1.84
CASD1-201ENST00000297273 WIZO95785 1651 aa26.54■■□□□ 1.84
CASD1-201ENST00000297273 ERICH6Q7L0X2 663 aa26.49■■□□□ 1.83
CASD1-201ENST00000297273 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
CASD1-201ENST00000297273 TRIM52Q96A61 297 aa26.43■■□□□ 1.82
CASD1-201ENST00000297273 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
CASD1-201ENST00000297273 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.82
CASD1-201ENST00000297273 FKBP8Q14318 412 aa26.34■■□□□ 1.81
CASD1-201ENST00000297273 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
CASD1-201ENST00000297273 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
CASD1-201ENST00000297273 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
CASD1-201ENST00000297273 ZNF326Q5BKZ1 582 aaKnown RBP26.27■■□□□ 1.8
CASD1-201ENST00000297273 SIN3AQ96ST3 1273 aa26.27■■□□□ 1.8
CASD1-201ENST00000297273 NACADO15069 1562 aa26.25■■□□□ 1.79
CASD1-201ENST00000297273 ANP32CO43423 234 aa26.23■■□□□ 1.79
CASD1-201ENST00000297273 IRX6P78412 446 aaPredicted RBP26.22■■□□□ 1.79
CASD1-201ENST00000297273 CHIC2Q9UKJ5 165 aa26.22■■□□□ 1.79
CASD1-201ENST00000297273 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
CASD1-201ENST00000297273 MYT1Q01538 1121 aa26.13■■□□□ 1.77
CASD1-201ENST00000297273 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
CASD1-201ENST00000297273 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
CASD1-201ENST00000297273 EEA1Q15075 1411 aa26.02■■□□□ 1.76
CASD1-201ENST00000297273 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
CASD1-201ENST00000297273 FBLN2P98095 1184 aa25.98■■□□□ 1.75
CASD1-201ENST00000297273 SUPT16HQ9Y5B9 1047 aaKnown RBP25.97■■□□□ 1.75
CASD1-201ENST00000297273 FAM9BQ8IZU0 186 aa25.96■■□□□ 1.75
CASD1-201ENST00000297273 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.75
CASD1-201ENST00000297273 RRP7BPQ9NSQ0 103 aa25.95■■□□□ 1.74
CASD1-201ENST00000297273 RAPGEF2Q9Y4G8 1499 aa25.92■■□□□ 1.74
CASD1-201ENST00000297273 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
CASD1-201ENST00000297273 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
CASD1-201ENST00000297273 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
CASD1-201ENST00000297273 SALL2Q9Y467 1007 aaPredicted RBP25.85■■□□□ 1.73
CASD1-201ENST00000297273 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
CASD1-201ENST00000297273 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
CASD1-201ENST00000297273 CDK11AQ9UQ88 783 aaPredicted RBP25.74■■□□□ 1.71
CASD1-201ENST00000297273 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
CASD1-201ENST00000297273 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
CASD1-201ENST00000297273 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
CASD1-201ENST00000297273 FOXD1Q16676 465 aa25.66■■□□□ 1.7
CASD1-201ENST00000297273 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.7
CASD1-201ENST00000297273 SMARCA4P51532 1647 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms