Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CNOT1-206ENST00000564557 582 ntTSL 313.29□□□□□ -0.283e-8■□□□□ 9.6
RPS3P23396 CNOT1-215ENST00000569020 535 ntTSL 413.07□□□□□ -0.323e-8■□□□□ 9.6
RPS3P23396 CNOT1-217ENST00000569263 304 ntTSL 212.83□□□□□ -0.363e-8■□□□□ 9.6
RPS3P23396 CNOT1-213ENST00000568158 496 ntTSL 312.69□□□□□ -0.383e-8■□□□□ 9.6
RPS3P23396 CNOT1-220ENST00000569916 599 ntTSL 312.67□□□□□ -0.383e-8■□□□□ 9.6
RPS3P23396 TFPI-207ENST00000421427 804 ntTSL 39.62□□□□□ -0.873e-8■□□□□ 9.6
RPS3P23396 CNOT1-207ENST00000565605 739 ntTSL 49.38□□□□□ -0.913e-8■□□□□ 9.6
RPS3P23396 TFPI-206ENST00000420747 685 ntTSL 37.35□□□□□ -1.233e-8■□□□□ 9.6
RPS3P23396 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.283e-8■□□□□ 9.6
RPS3P23396 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.21□□□□□ -1.413e-8■□□□□ 9.6
RPS3P23396 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)5.87□□□□□ -1.473e-8■□□□□ 9.6
RPS3P23396 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.713e-8■□□□□ 9.6
RPS3P23396 TFPI-209ENST00000437725 545 ntTSL 44.33□□□□□ -1.723e-8■□□□□ 9.6
RPS3P23396 TFPI-210ENST00000453013 733 ntTSL 22.86□□□□□ -1.953e-8■□□□□ 9.6
RPS3P23396 TFPI-205ENST00000417013 554 ntTSL 21.85□□□□□ -2.113e-8■□□□□ 9.6
RPS3P23396 CHPT1-210ENST00000552351 1524 ntTSL 226.45■■□□□ 1.836e-24■□□□□ 9.5
RPS3P23396 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.816e-24■□□□□ 9.5
RPS3P23396 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.746e-24■□□□□ 9.5
RPS3P23396 CHPT1-204ENST00000549128 1552 ntTSL 525.93■■□□□ 1.746e-24■□□□□ 9.5
RPS3P23396 PDIA5-205ENST00000484644 667 ntTSL 523.42■■□□□ 1.341e-8■□□□□ 9.5
RPS3P23396 CHPT1-202ENST00000546490 476 ntTSL 217.99■□□□□ 0.476e-24■□□□□ 9.5
RPS3P23396 YIPF3-211ENST00000503147 652 ntTSL 212.13□□□□□ -0.474e-7■□□□□ 9.5
RPS3P23396 CHPT1-206ENST00000550385 754 ntTSL 510.53□□□□□ -0.726e-24■□□□□ 9.5
RPS3P23396 ERBB2-207ENST00000578502 497 ntTSL 510.22□□□□□ -0.771e-8■□□□□ 9.5
RPS3P23396 PDIA5-208ENST00000495004 563 ntTSL 310.05□□□□□ -0.81e-8■□□□□ 9.5
RPS3P23396 CD46-211ENST00000464082 567 ntTSL 25.12□□□□□ -1.591e-8■□□□□ 9.5
RPS3P23396 CTSA-209ENST00000493522 901 ntTSL 211.34□□□□□ -0.593e-9■□□□□ 9.5
RPS3P23396 LITAF-204ENST00000570798 593 ntTSL 417.56■□□□□ 0.45e-7■□□□□ 9.5
RPS3P23396 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.412e-9■□□□□ 9.5
RPS3P23396 FKBP10-206ENST00000489591 2826 ntTSL 215.83■□□□□ 0.122e-9■□□□□ 9.5
RPS3P23396 EEF1G-202ENST00000524420 557 ntTSL 411.12□□□□□ -0.639e-7■□□□□ 9.5
RPS3P23396 PSMA7-205ENST00000484488 1023 ntTSL 322.88■■□□□ 1.257e-8■□□□□ 9.5
RPS3P23396 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.347e-8■□□□□ 9.5
RPS3P23396 SLC2A3-203ENST00000476634 763 ntTSL 25.79□□□□□ -1.481e-8■□□□□ 9.5
RPS3P23396 PCMT1-204ENST00000460828 582 ntTSL 515.81■□□□□ 0.125e-15■□□□□ 9.5
RPS3P23396 UBE2S-202ENST00000587845 743 ntTSL 222.93■■□□□ 1.262e-13■□□□□ 9.5
RPS3P23396 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.052e-13■□□□□ 9.5
RPS3P23396 AKAP1-216ENST00000575322 650 ntTSL 46.47□□□□□ -1.372e-7■□□□□ 9.5
RPS3P23396 MED15-223ENST00000476187 593 ntTSL 412.18□□□□□ -0.462e-7■□□□□ 9.5
RPS3P23396 C16orf58-208ENST00000567673 766 ntTSL 211.41□□□□□ -0.582e-7■□□□□ 9.5
RPS3P23396 MED15-226ENST00000478831 707 ntTSL 411.16□□□□□ -0.622e-7■□□□□ 9.5
RPS3P23396 SMC1A-206ENST00000470241 838 ntTSL 310.4□□□□□ -0.742e-7■□□□□ 9.5
RPS3P23396 EEF2-207ENST00000600794 352 ntTSL 38.86□□□□□ -0.994e-37■□□□□ 9.5
RPS3P23396 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.292e-7■□□□□ 9.5
RPS3P23396 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.29□□□□□ -1.42e-7■□□□□ 9.5
RPS3P23396 SARAF-205ENST00000518340 582 ntTSL 317.97■□□□□ 0.471e-8■□□□□ 9.5
RPS3P23396 SARAF-208ENST00000521265 1741 ntTSL 512.84□□□□□ -0.351e-8■□□□□ 9.5
RPS3P23396 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)15.04■□□□□ -02e-7■□□□□ 9.5
RPS3P23396 SRSF3-206ENST00000620242 544 ntTSL 212.72□□□□□ -0.375e-12■□□□□ 9.5
RPS3P23396 SRSF3-201ENST00000339436 1518 ntTSL 212.6□□□□□ -0.393e-12■□□□□ 9.5
RPS3P23396 SRSF3-203ENST00000477442 1095 ntTSL 512.52□□□□□ -0.413e-12■□□□□ 9.5
RPS3P23396 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.423e-12■□□□□ 9.5
RPS3P23396 SRSF3-204ENST00000613941 595 ntTSL 49.6□□□□□ -0.873e-12■□□□□ 9.5
RPS3P23396 HNRNPUL1-217ENST00000600596 581 ntTSL 59.32□□□□□ -0.922e-7■□□□□ 9.5
RPS3P23396 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.343e-12■□□□□ 9.5
RPS3P23396 IARS-212ENST00000498025 707 ntTSL 31.85□□□□□ -2.112e-7■□□□□ 9.5
RPS3P23396 NACA-205ENST00000546410 600 ntTSL 21.76□□□□□ -2.133e-18■□□□□ 9.5
RPS3P23396 SGSH-208ENST00000572208 584 ntTSL 417.7■□□□□ 0.421e-7■□□□□ 9.5
RPS3P23396 SGSH-212ENST00000575188 553 ntTSL 317.7■□□□□ 0.421e-7■□□□□ 9.5
RPS3P23396 SGSH-217ENST00000576941 578 ntTSL 417.7■□□□□ 0.421e-7■□□□□ 9.5
RPS3P23396 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.67■□□□□ 0.11e-7■□□□□ 9.5
RPS3P23396 SGSH-202ENST00000570427 583 ntTSL 315.3■□□□□ 0.041e-7■□□□□ 9.5
RPS3P23396 SGSH-204ENST00000571051 538 ntTSL 414.73□□□□□ -0.051e-7■□□□□ 9.5
RPS3P23396 SGSH-207ENST00000571675 571 ntTSL 214.73□□□□□ -0.051e-7■□□□□ 9.5
RPS3P23396 SGSH-211ENST00000574505 587 ntTSL 512.48□□□□□ -0.411e-7■□□□□ 9.5
RPS3P23396 SGSH-215ENST00000576707 546 ntTSL 411.12□□□□□ -0.631e-7■□□□□ 9.5
RPS3P23396 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.849e-10■□□□□ 9.5
RPS3P23396 LRRC61-203ENST00000463441 667 ntTSL 223.54■■□□□ 1.369e-10■□□□□ 9.5
RPS3P23396 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.189e-10■□□□□ 9.5
RPS3P23396 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.49e-10■□□□□ 9.5
RPS3P23396 ATP13A1-213ENST00000497156 715 ntTSL 216.4■□□□□ 0.229e-10■□□□□ 9.5
RPS3P23396 ATP7B-210ENST00000634296 2328 ntTSL 513.4□□□□□ -0.262e-6■□□□□ 9.5
RPS3P23396 ATP7B-214ENST00000634810 5825 ntTSL 1 (best)12.97□□□□□ -0.332e-6■□□□□ 9.5
RPS3P23396 PCSK1N-202ENST00000611033 392 ntTSL 312.03□□□□□ -0.489e-10■□□□□ 9.5
RPS3P23396 ATP13A1-215ENST00000497762 575 ntTSL 211.81□□□□□ -0.529e-10■□□□□ 9.5
RPS3P23396 ATP13A1-212ENST00000496082 698 ntTSL 411.74□□□□□ -0.539e-10■□□□□ 9.5
RPS3P23396 ATP7B-213ENST00000634620 5653 ntTSL 1 (best)10.54□□□□□ -0.722e-6■□□□□ 9.5
RPS3P23396 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.563e-13■□□□□ 9.5
RPS3P23396 RAB6A-206ENST00000540771 699 ntTSL 521.98■■□□□ 1.113e-6■□□□□ 9.5
RPS3P23396 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.55■■□□□ 1.043e-6■□□□□ 9.5
RPS3P23396 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.493e-13■□□□□ 9.5
RPS3P23396 RAB6A-208ENST00000541795 1812 ntTSL 217.53■□□□□ 0.43e-6■□□□□ 9.5
RPS3P23396 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.31■□□□□ 0.363e-6■□□□□ 9.5
RPS3P23396 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.65■□□□□ 0.13e-13■□□□□ 9.5
RPS3P23396 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.75□□□□□ -0.053e-13■□□□□ 9.5
RPS3P23396 RPL28-202ENST00000426763 5620 ntTSL 1 (best)13.42□□□□□ -0.263e-13■□□□□ 9.5
RPS3P23396 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.383e-6■□□□□ 9.5
RPS3P23396 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.53e-6■□□□□ 9.5
RPS3P23396 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.35□□□□□ -1.073e-13■□□□□ 9.5
RPS3P23396 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.23e-13■□□□□ 9.5
RPS3P23396 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.42■□□□□ 0.221e-7■□□□□ 9.5
RPS3P23396 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.181e-7■□□□□ 9.5
RPS3P23396 SOAT2-203ENST00000551896 570 ntTSL 215.46■□□□□ 0.075e-10■□□□□ 9.5
RPS3P23396 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.11e-7■□□□□ 9.5
RPS3P23396 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.95□□□□□ -0.181e-7■□□□□ 9.5
RPS3P23396 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.411e-7■□□□□ 9.5
RPS3P23396 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.26□□□□□ -0.451e-7■□□□□ 9.5
RPS3P23396 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.481e-7■□□□□ 9.5
RPS3P23396 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.48□□□□□ -0.571e-7■□□□□ 9.5
RPS3P23396 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC11.48□□□□□ -0.571e-7■□□□□ 9.5
Retrieved 100 of 24,271 protein–RNA pairs in 582 ms