RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
ERBB2-207ENST00000578502 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
ERBB2-207ENST00000578502 ABCC9O60706 1549 aa22.69■■□□□ 1.22
ERBB2-207ENST00000578502 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
ERBB2-207ENST00000578502 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
ERBB2-207ENST00000578502 NACADO15069 1562 aa21.61■■□□□ 1.05
ERBB2-207ENST00000578502 ZCCHC6Q5VYS8 1495 aaKnown RBP21.49■■□□□ 1.03
ERBB2-207ENST00000578502 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
ERBB2-207ENST00000578502 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
ERBB2-207ENST00000578502 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
ERBB2-207ENST00000578502 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
ERBB2-207ENST00000578502 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
ERBB2-207ENST00000578502 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
ERBB2-207ENST00000578502 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
ERBB2-207ENST00000578502 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
ERBB2-207ENST00000578502 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
ERBB2-207ENST00000578502 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
ERBB2-207ENST00000578502 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
ERBB2-207ENST00000578502 SMARCA4P51532 1647 aa20.08■□□□□ 0.8
ERBB2-207ENST00000578502 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
ERBB2-207ENST00000578502 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
ERBB2-207ENST00000578502 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
ERBB2-207ENST00000578502 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
ERBB2-207ENST00000578502 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
ERBB2-207ENST00000578502 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
ERBB2-207ENST00000578502 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
ERBB2-207ENST00000578502 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
ERBB2-207ENST00000578502 WIZO95785 1651 aa19.76■□□□□ 0.75
ERBB2-207ENST00000578502 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
ERBB2-207ENST00000578502 NESP48681 1621 aa19.63■□□□□ 0.73
ERBB2-207ENST00000578502 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
ERBB2-207ENST00000578502 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
ERBB2-207ENST00000578502 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
ERBB2-207ENST00000578502 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
ERBB2-207ENST00000578502 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
ERBB2-207ENST00000578502 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
ERBB2-207ENST00000578502 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
ERBB2-207ENST00000578502 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
ERBB2-207ENST00000578502 CUX2O14529 1486 aa19.28■□□□□ 0.68
ERBB2-207ENST00000578502 CFTRP13569 1480 aa19.25■□□□□ 0.67
ERBB2-207ENST00000578502 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
ERBB2-207ENST00000578502 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
ERBB2-207ENST00000578502 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
ERBB2-207ENST00000578502 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
ERBB2-207ENST00000578502 WDR62O43379 1518 aa19.09■□□□□ 0.65
ERBB2-207ENST00000578502 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
ERBB2-207ENST00000578502 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
ERBB2-207ENST00000578502 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
ERBB2-207ENST00000578502 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
ERBB2-207ENST00000578502 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
ERBB2-207ENST00000578502 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
ERBB2-207ENST00000578502 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-207ENST00000578502 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
ERBB2-207ENST00000578502 CUX1P39880 1505 aa18.72■□□□□ 0.59
ERBB2-207ENST00000578502 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
ERBB2-207ENST00000578502 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
ERBB2-207ENST00000578502 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
ERBB2-207ENST00000578502 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
ERBB2-207ENST00000578502 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.575e-6■□□□□ 9.3
ERBB2-207ENST00000578502 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
ERBB2-207ENST00000578502 SOGA1O94964 1423 aa18.63■□□□□ 0.57
ERBB2-207ENST00000578502 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
ERBB2-207ENST00000578502 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
ERBB2-207ENST00000578502 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
ERBB2-207ENST00000578502 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
ERBB2-207ENST00000578502 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
ERBB2-207ENST00000578502 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
ERBB2-207ENST00000578502 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
ERBB2-207ENST00000578502 CHD1O14646 1710 aa18.45■□□□□ 0.54
ERBB2-207ENST00000578502 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
ERBB2-207ENST00000578502 FBLN2P98095 1184 aa18.43■□□□□ 0.54
ERBB2-207ENST00000578502 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
ERBB2-207ENST00000578502 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
ERBB2-207ENST00000578502 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.54
ERBB2-207ENST00000578502 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
ERBB2-207ENST00000578502 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
ERBB2-207ENST00000578502 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-207ENST00000578502 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-207ENST00000578502 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
ERBB2-207ENST00000578502 SYNJ2O15056 1496 aa18.28■□□□□ 0.52
ERBB2-207ENST00000578502 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
ERBB2-207ENST00000578502 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
ERBB2-207ENST00000578502 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
ERBB2-207ENST00000578502 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
ERBB2-207ENST00000578502 ADAMTS12P58397 1594 aa18.22■□□□□ 0.51
ERBB2-207ENST00000578502 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
ERBB2-207ENST00000578502 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
ERBB2-207ENST00000578502 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
ERBB2-207ENST00000578502 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
ERBB2-207ENST00000578502 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
ERBB2-207ENST00000578502 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
ERBB2-207ENST00000578502 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
ERBB2-207ENST00000578502 IGF1RP08069 1367 aa18.11■□□□□ 0.49
ERBB2-207ENST00000578502 ARAP1Q96P48 1450 aa18.1■□□□□ 0.49
ERBB2-207ENST00000578502 NUP160Q12769 1436 aa18.09■□□□□ 0.49
ERBB2-207ENST00000578502 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
ERBB2-207ENST00000578502 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
ERBB2-207ENST00000578502 CUL7Q14999 1698 aa18■□□□□ 0.47
ERBB2-207ENST00000578502 CARMIL1Q5VZK9 1371 aa17.98■□□□□ 0.47
ERBB2-207ENST00000578502 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms