RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 NISCHQ9Y2I1 1504 aa34.17■■■■□ 3.06
CNOT1-215ENST00000569020 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
CNOT1-215ENST00000569020 ABCC9O60706 1549 aa30.61■■■□□ 2.49
CNOT1-215ENST00000569020 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
CNOT1-215ENST00000569020 NACADO15069 1562 aa29■■■□□ 2.23
CNOT1-215ENST00000569020 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CNOT1-215ENST00000569020 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
CNOT1-215ENST00000569020 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CNOT1-215ENST00000569020 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
CNOT1-215ENST00000569020 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
CNOT1-215ENST00000569020 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
CNOT1-215ENST00000569020 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
CNOT1-215ENST00000569020 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
CNOT1-215ENST00000569020 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
CNOT1-215ENST00000569020 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
CNOT1-215ENST00000569020 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
CNOT1-215ENST00000569020 EIF4G1Q04637 1599 aaKnown RBP27.63■■■□□ 2.01
CNOT1-215ENST00000569020 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
CNOT1-215ENST00000569020 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
CNOT1-215ENST00000569020 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
CNOT1-215ENST00000569020 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
CNOT1-215ENST00000569020 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CNOT1-215ENST00000569020 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
CNOT1-215ENST00000569020 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
CNOT1-215ENST00000569020 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
CNOT1-215ENST00000569020 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
CNOT1-215ENST00000569020 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
CNOT1-215ENST00000569020 CUX2O14529 1486 aa26.4■■□□□ 1.82
CNOT1-215ENST00000569020 MROH2BQ7Z745 1585 aa26.32■■□□□ 1.8
CNOT1-215ENST00000569020 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
CNOT1-215ENST00000569020 NESP48681 1621 aa26.29■■□□□ 1.8
CNOT1-215ENST00000569020 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
CNOT1-215ENST00000569020 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
CNOT1-215ENST00000569020 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
CNOT1-215ENST00000569020 WIZO95785 1651 aa26.05■■□□□ 1.76
CNOT1-215ENST00000569020 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
CNOT1-215ENST00000569020 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
CNOT1-215ENST00000569020 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
CNOT1-215ENST00000569020 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
CNOT1-215ENST00000569020 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
CNOT1-215ENST00000569020 WDR62O43379 1518 aa25.71■■□□□ 1.71
CNOT1-215ENST00000569020 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
CNOT1-215ENST00000569020 CEP164Q9UPV0 1460 aa25.68■■□□□ 1.7
CNOT1-215ENST00000569020 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
CNOT1-215ENST00000569020 CFTRP13569 1480 aa25.63■■□□□ 1.69
CNOT1-215ENST00000569020 PRDM2Q13029 1718 aa25.51■■□□□ 1.68
CNOT1-215ENST00000569020 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
CNOT1-215ENST00000569020 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
CNOT1-215ENST00000569020 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
CNOT1-215ENST00000569020 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
CNOT1-215ENST00000569020 IFT140Q96RY7 1462 aa25.16■■□□□ 1.62
CNOT1-215ENST00000569020 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
CNOT1-215ENST00000569020 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
CNOT1-215ENST00000569020 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
CNOT1-215ENST00000569020 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
CNOT1-215ENST00000569020 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
CNOT1-215ENST00000569020 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
CNOT1-215ENST00000569020 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
CNOT1-215ENST00000569020 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
CNOT1-215ENST00000569020 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
CNOT1-215ENST00000569020 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
CNOT1-215ENST00000569020 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.578e-7■■■■■ 28.7
CNOT1-215ENST00000569020 CHD1O14646 1710 aa24.85■■□□□ 1.57
CNOT1-215ENST00000569020 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
CNOT1-215ENST00000569020 SOGA1O94964 1423 aa24.79■■□□□ 1.56
CNOT1-215ENST00000569020 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
CNOT1-215ENST00000569020 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
CNOT1-215ENST00000569020 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
CNOT1-215ENST00000569020 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
CNOT1-215ENST00000569020 CUX1P39880 1505 aa24.72■■□□□ 1.55
CNOT1-215ENST00000569020 FBLN2P98095 1184 aa24.72■■□□□ 1.55
CNOT1-215ENST00000569020 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
CNOT1-215ENST00000569020 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
CNOT1-215ENST00000569020 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
CNOT1-215ENST00000569020 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
CNOT1-215ENST00000569020 CYB5RLQ6IPT4 315 aa24.58■■□□□ 1.53
CNOT1-215ENST00000569020 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
CNOT1-215ENST00000569020 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
CNOT1-215ENST00000569020 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
CNOT1-215ENST00000569020 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
CNOT1-215ENST00000569020 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
CNOT1-215ENST00000569020 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
CNOT1-215ENST00000569020 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
CNOT1-215ENST00000569020 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
CNOT1-215ENST00000569020 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
CNOT1-215ENST00000569020 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
CNOT1-215ENST00000569020 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
CNOT1-215ENST00000569020 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
CNOT1-215ENST00000569020 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
CNOT1-215ENST00000569020 TRHP20396 242 aaPredicted RBP24.32■■□□□ 1.48
CNOT1-215ENST00000569020 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
CNOT1-215ENST00000569020 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
CNOT1-215ENST00000569020 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
CNOT1-215ENST00000569020 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CNOT1-215ENST00000569020 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
CNOT1-215ENST00000569020 NUP160Q12769 1436 aa24.16■■□□□ 1.46
CNOT1-215ENST00000569020 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
CNOT1-215ENST00000569020 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
CNOT1-215ENST00000569020 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
CNOT1-215ENST00000569020 RUSC2Q8N2Y8 1516 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms