RNA–Protein interactions for RNA: ENST00000476187.1

MED15-223, Transcript of mediator complex subunit 15, humanhuman

TSL 4

Gene MED15, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-223ENST00000476187 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
MED15-223ENST00000476187 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
MED15-223ENST00000476187 ABCC9O60706 1549 aa27.92■■■□□ 2.06
MED15-223ENST00000476187 RB1CC1Q8TDY2 1594 aa26.65■■□□□ 1.86
MED15-223ENST00000476187 NACADO15069 1562 aa26.58■■□□□ 1.85
MED15-223ENST00000476187 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
MED15-223ENST00000476187 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
MED15-223ENST00000476187 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
MED15-223ENST00000476187 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
MED15-223ENST00000476187 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
MED15-223ENST00000476187 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
MED15-223ENST00000476187 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
MED15-223ENST00000476187 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
MED15-223ENST00000476187 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
MED15-223ENST00000476187 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
MED15-223ENST00000476187 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
MED15-223ENST00000476187 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
MED15-223ENST00000476187 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
MED15-223ENST00000476187 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
MED15-223ENST00000476187 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
MED15-223ENST00000476187 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
MED15-223ENST00000476187 PEG3Q9GZU2 1588 aa24.43■■□□□ 1.5
MED15-223ENST00000476187 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
MED15-223ENST00000476187 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
MED15-223ENST00000476187 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
MED15-223ENST00000476187 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
MED15-223ENST00000476187 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
MED15-223ENST00000476187 NESP48681 1621 aa24.15■■□□□ 1.46
MED15-223ENST00000476187 WIZO95785 1651 aa24.05■■□□□ 1.44
MED15-223ENST00000476187 CUX2O14529 1486 aa23.98■■□□□ 1.43
MED15-223ENST00000476187 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
MED15-223ENST00000476187 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
MED15-223ENST00000476187 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
MED15-223ENST00000476187 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
MED15-223ENST00000476187 KIF21AQ7Z4S6 1674 aa23.82■■□□□ 1.4
MED15-223ENST00000476187 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
MED15-223ENST00000476187 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
MED15-223ENST00000476187 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
MED15-223ENST00000476187 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
MED15-223ENST00000476187 CFTRP13569 1480 aa23.64■■□□□ 1.38
MED15-223ENST00000476187 WDR62O43379 1518 aa23.57■■□□□ 1.36
MED15-223ENST00000476187 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
MED15-223ENST00000476187 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
MED15-223ENST00000476187 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
MED15-223ENST00000476187 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
MED15-223ENST00000476187 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
MED15-223ENST00000476187 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
MED15-223ENST00000476187 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
MED15-223ENST00000476187 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
MED15-223ENST00000476187 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
MED15-223ENST00000476187 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
MED15-223ENST00000476187 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
MED15-223ENST00000476187 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
MED15-223ENST00000476187 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
MED15-223ENST00000476187 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
MED15-223ENST00000476187 CUX1P39880 1505 aa22.87■■□□□ 1.25
MED15-223ENST00000476187 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.243e-17■■■■□ 25.4
MED15-223ENST00000476187 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
MED15-223ENST00000476187 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
MED15-223ENST00000476187 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
MED15-223ENST00000476187 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
MED15-223ENST00000476187 SOGA1O94964 1423 aa22.73■■□□□ 1.23
MED15-223ENST00000476187 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
MED15-223ENST00000476187 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
MED15-223ENST00000476187 CHD1O14646 1710 aa22.68■■□□□ 1.22
MED15-223ENST00000476187 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
MED15-223ENST00000476187 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
MED15-223ENST00000476187 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
MED15-223ENST00000476187 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
MED15-223ENST00000476187 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
MED15-223ENST00000476187 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
MED15-223ENST00000476187 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
MED15-223ENST00000476187 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
MED15-223ENST00000476187 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
MED15-223ENST00000476187 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
MED15-223ENST00000476187 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
MED15-223ENST00000476187 GRIN2BQ13224 1484 aa22.51■■□□□ 1.19
MED15-223ENST00000476187 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
MED15-223ENST00000476187 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
MED15-223ENST00000476187 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
MED15-223ENST00000476187 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
MED15-223ENST00000476187 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
MED15-223ENST00000476187 SYNJ2O15056 1496 aa22.43■■□□□ 1.18
MED15-223ENST00000476187 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
MED15-223ENST00000476187 FBLN2P98095 1184 aa22.36■■□□□ 1.17
MED15-223ENST00000476187 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
MED15-223ENST00000476187 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
MED15-223ENST00000476187 NUP160Q12769 1436 aa22.26■■□□□ 1.15
MED15-223ENST00000476187 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
MED15-223ENST00000476187 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
MED15-223ENST00000476187 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
MED15-223ENST00000476187 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
MED15-223ENST00000476187 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
MED15-223ENST00000476187 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
MED15-223ENST00000476187 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
MED15-223ENST00000476187 IGF1RP08069 1367 aa22.08■■□□□ 1.12
MED15-223ENST00000476187 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
MED15-223ENST00000476187 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
MED15-223ENST00000476187 CUL7Q14999 1698 aa21.92■■□□□ 1.1
MED15-223ENST00000476187 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms