RNA–Protein interactions for RNA: ENST00000503147.1

YIPF3-211, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-211ENST00000503147 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
YIPF3-211ENST00000503147 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
YIPF3-211ENST00000503147 ABCC9O60706 1549 aa25.95■■□□□ 1.74
YIPF3-211ENST00000503147 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
YIPF3-211ENST00000503147 NACADO15069 1562 aa24.97■■□□□ 1.59
YIPF3-211ENST00000503147 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
YIPF3-211ENST00000503147 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
YIPF3-211ENST00000503147 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
YIPF3-211ENST00000503147 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
YIPF3-211ENST00000503147 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
YIPF3-211ENST00000503147 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
YIPF3-211ENST00000503147 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
YIPF3-211ENST00000503147 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
YIPF3-211ENST00000503147 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
YIPF3-211ENST00000503147 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
YIPF3-211ENST00000503147 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
YIPF3-211ENST00000503147 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
YIPF3-211ENST00000503147 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
YIPF3-211ENST00000503147 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
YIPF3-211ENST00000503147 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
YIPF3-211ENST00000503147 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
YIPF3-211ENST00000503147 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
YIPF3-211ENST00000503147 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
YIPF3-211ENST00000503147 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
YIPF3-211ENST00000503147 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
YIPF3-211ENST00000503147 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
YIPF3-211ENST00000503147 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
YIPF3-211ENST00000503147 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
YIPF3-211ENST00000503147 WIZO95785 1651 aa22.85■■□□□ 1.25
YIPF3-211ENST00000503147 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
YIPF3-211ENST00000503147 NESP48681 1621 aa22.5■■□□□ 1.19
YIPF3-211ENST00000503147 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
YIPF3-211ENST00000503147 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
YIPF3-211ENST00000503147 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
YIPF3-211ENST00000503147 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
YIPF3-211ENST00000503147 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
YIPF3-211ENST00000503147 CFTRP13569 1480 aa22.3■■□□□ 1.16
YIPF3-211ENST00000503147 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
YIPF3-211ENST00000503147 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
YIPF3-211ENST00000503147 CUX2O14529 1486 aa22.16■■□□□ 1.14
YIPF3-211ENST00000503147 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
YIPF3-211ENST00000503147 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
YIPF3-211ENST00000503147 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
YIPF3-211ENST00000503147 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.12
YIPF3-211ENST00000503147 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
YIPF3-211ENST00000503147 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
YIPF3-211ENST00000503147 WDR62O43379 1518 aa21.96■■□□□ 1.11
YIPF3-211ENST00000503147 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
YIPF3-211ENST00000503147 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
YIPF3-211ENST00000503147 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
YIPF3-211ENST00000503147 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
YIPF3-211ENST00000503147 CUX1P39880 1505 aa21.68■■□□□ 1.06
YIPF3-211ENST00000503147 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
YIPF3-211ENST00000503147 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
YIPF3-211ENST00000503147 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
YIPF3-211ENST00000503147 SOGA1O94964 1423 aa21.55■■□□□ 1.04
YIPF3-211ENST00000503147 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
YIPF3-211ENST00000503147 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
YIPF3-211ENST00000503147 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
YIPF3-211ENST00000503147 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
YIPF3-211ENST00000503147 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
YIPF3-211ENST00000503147 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
YIPF3-211ENST00000503147 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.037e-6■■■□□ 17.6
YIPF3-211ENST00000503147 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
YIPF3-211ENST00000503147 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
YIPF3-211ENST00000503147 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
YIPF3-211ENST00000503147 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
YIPF3-211ENST00000503147 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
YIPF3-211ENST00000503147 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
YIPF3-211ENST00000503147 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
YIPF3-211ENST00000503147 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
YIPF3-211ENST00000503147 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
YIPF3-211ENST00000503147 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
YIPF3-211ENST00000503147 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
YIPF3-211ENST00000503147 FBLN2P98095 1184 aa21.17■□□□□ 0.98
YIPF3-211ENST00000503147 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
YIPF3-211ENST00000503147 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
YIPF3-211ENST00000503147 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
YIPF3-211ENST00000503147 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
YIPF3-211ENST00000503147 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
YIPF3-211ENST00000503147 CHD1O14646 1710 aa21.1■□□□□ 0.97
YIPF3-211ENST00000503147 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
YIPF3-211ENST00000503147 IGF1RP08069 1367 aa21.07■□□□□ 0.96
YIPF3-211ENST00000503147 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
YIPF3-211ENST00000503147 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
YIPF3-211ENST00000503147 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
YIPF3-211ENST00000503147 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
YIPF3-211ENST00000503147 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
YIPF3-211ENST00000503147 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
YIPF3-211ENST00000503147 NUP160Q12769 1436 aa20.91■□□□□ 0.94
YIPF3-211ENST00000503147 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
YIPF3-211ENST00000503147 CUL7Q14999 1698 aa20.89■□□□□ 0.93
YIPF3-211ENST00000503147 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
YIPF3-211ENST00000503147 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
YIPF3-211ENST00000503147 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
YIPF3-211ENST00000503147 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
YIPF3-211ENST00000503147 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
YIPF3-211ENST00000503147 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
YIPF3-211ENST00000503147 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
YIPF3-211ENST00000503147 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms