RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
ATP7B-213ENST00000634620 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
ATP7B-213ENST00000634620 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
ATP7B-213ENST00000634620 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
ATP7B-213ENST00000634620 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
ATP7B-213ENST00000634620 ABCC9O60706 1549 aa17.46■□□□□ 0.38
ATP7B-213ENST00000634620 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
ATP7B-213ENST00000634620 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATP7B-213ENST00000634620 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
ATP7B-213ENST00000634620 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
ATP7B-213ENST00000634620 MYT1Q01538 1121 aa16.74■□□□□ 0.27
ATP7B-213ENST00000634620 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
ATP7B-213ENST00000634620 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.26
ATP7B-213ENST00000634620 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.26
ATP7B-213ENST00000634620 APLP2Q06481 763 aa16.7■□□□□ 0.26
ATP7B-213ENST00000634620 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
ATP7B-213ENST00000634620 ATP1B4Q9UN42 357 aaPredicted RBP16.68■□□□□ 0.26
ATP7B-213ENST00000634620 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
ATP7B-213ENST00000634620 FBLN2P98095 1184 aa16.65■□□□□ 0.26
ATP7B-213ENST00000634620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
ATP7B-213ENST00000634620 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
ATP7B-213ENST00000634620 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
ATP7B-213ENST00000634620 ZEB1P37275 1124 aaPredicted RBP16.47■□□□□ 0.23
ATP7B-213ENST00000634620 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
ATP7B-213ENST00000634620 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATP7B-213ENST00000634620 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
ATP7B-213ENST00000634620 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
ATP7B-213ENST00000634620 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
ATP7B-213ENST00000634620 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
ATP7B-213ENST00000634620 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
ATP7B-213ENST00000634620 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
ATP7B-213ENST00000634620 NEFLP07196 543 aa16.2■□□□□ 0.18
ATP7B-213ENST00000634620 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
ATP7B-213ENST00000634620 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
ATP7B-213ENST00000634620 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
ATP7B-213ENST00000634620 HRCP23327 699 aa16.16■□□□□ 0.18
ATP7B-213ENST00000634620 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
ATP7B-213ENST00000634620 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
ATP7B-213ENST00000634620 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
ATP7B-213ENST00000634620 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
ATP7B-213ENST00000634620 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
ATP7B-213ENST00000634620 BCANQ96GW7 911 aa15.92■□□□□ 0.14
ATP7B-213ENST00000634620 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
ATP7B-213ENST00000634620 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
ATP7B-213ENST00000634620 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
ATP7B-213ENST00000634620 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
ATP7B-213ENST00000634620 ITGAEP38570 1179 aa15.63■□□□□ 0.09
ATP7B-213ENST00000634620 STAG3Q9UJ98 1225 aa15.63■□□□□ 0.09
ATP7B-213ENST00000634620 NACADO15069 1562 aa15.62■□□□□ 0.09
ATP7B-213ENST00000634620 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
ATP7B-213ENST00000634620 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
ATP7B-213ENST00000634620 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
ATP7B-213ENST00000634620 CDK11AQ9UQ88 783 aaPredicted RBP15.56■□□□□ 0.08
ATP7B-213ENST00000634620 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
ATP7B-213ENST00000634620 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
ATP7B-213ENST00000634620 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
ATP7B-213ENST00000634620 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
ATP7B-213ENST00000634620 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
ATP7B-213ENST00000634620 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
ATP7B-213ENST00000634620 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
ATP7B-213ENST00000634620 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
ATP7B-213ENST00000634620 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
ATP7B-213ENST00000634620 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
ATP7B-213ENST00000634620 C14orf37Q86TY3 774 aa15.4■□□□□ 0.06
ATP7B-213ENST00000634620 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
ATP7B-213ENST00000634620 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
ATP7B-213ENST00000634620 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
ATP7B-213ENST00000634620 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
ATP7B-213ENST00000634620 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
ATP7B-213ENST00000634620 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
ATP7B-213ENST00000634620 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
ATP7B-213ENST00000634620 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
ATP7B-213ENST00000634620 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
ATP7B-213ENST00000634620 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
ATP7B-213ENST00000634620 P3H3Q8IVL6 736 aa15.27■□□□□ 0.03
ATP7B-213ENST00000634620 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
ATP7B-213ENST00000634620 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
ATP7B-213ENST00000634620 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
ATP7B-213ENST00000634620 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
ATP7B-213ENST00000634620 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
ATP7B-213ENST00000634620 A0A0G2JS52 829 aa15.18■□□□□ 0.02
ATP7B-213ENST00000634620 EEA1Q15075 1411 aa15.16■□□□□ 0.02
ATP7B-213ENST00000634620 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
ATP7B-213ENST00000634620 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
ATP7B-213ENST00000634620 FOXD1Q16676 465 aa15.13■□□□□ 0.01
ATP7B-213ENST00000634620 MLECQ14165 292 aa15.13■□□□□ 0.01
ATP7B-213ENST00000634620 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
ATP7B-213ENST00000634620 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
ATP7B-213ENST00000634620 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
ATP7B-213ENST00000634620 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
ATP7B-213ENST00000634620 CLIP1P30622 1438 aa15.06■□□□□ 0
ATP7B-213ENST00000634620 CEP162Q5TB80 1403 aa15.06■□□□□ 0
ATP7B-213ENST00000634620 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ 0
ATP7B-213ENST00000634620 ANP32CO43423 234 aa15.04■□□□□ -0
ATP7B-213ENST00000634620 SLC24A1O60721 1099 aa15.03■□□□□ -0
ATP7B-213ENST00000634620 EIF5BO60841 1220 aaKnown RBP15.02■□□□□ -0
ATP7B-213ENST00000634620 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
ATP7B-213ENST00000634620 TSPY4P0CV99 314 aa14.99□□□□□ -0.01
ATP7B-213ENST00000634620 TSPY10P0CW01 314 aa14.99□□□□□ -0.01
ATP7B-213ENST00000634620 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms