RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 NISCHQ9Y2I1 1504 aa11.41□□□□□ -0.58
CNOT1-211ENST00000567188 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
CNOT1-211ENST00000567188 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.73
CNOT1-211ENST00000567188 MYT1Q01538 1121 aa10.37□□□□□ -0.75
CNOT1-211ENST00000567188 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
CNOT1-211ENST00000567188 ABCC9O60706 1549 aa10.16□□□□□ -0.78
CNOT1-211ENST00000567188 SUPT5HO00267 1087 aaKnown RBP10.04□□□□□ -0.8
CNOT1-211ENST00000567188 EHMT2Q96KQ7 1210 aa9.91□□□□□ -0.82
CNOT1-211ENST00000567188 PABPN1Q86U42 306 aaKnown RBP eCLIP9.87□□□□□ -0.833e-7■□□□□ 8.9
CNOT1-211ENST00000567188 CCDC180Q9P1Z9 1646 aa9.81□□□□□ -0.84
CNOT1-211ENST00000567188 SCRIBQ14160 1630 aa9.77□□□□□ -0.85
CNOT1-211ENST00000567188 TTBK1Q5TCY1 1321 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-211ENST00000567188 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-211ENST00000567188 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-211ENST00000567188 ZCCHC6Q5VYS8 1495 aaKnown RBP9.46□□□□□ -0.89
CNOT1-211ENST00000567188 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.89
CNOT1-211ENST00000567188 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
CNOT1-211ENST00000567188 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
CNOT1-211ENST00000567188 NACADO15069 1562 aa9.28□□□□□ -0.92
CNOT1-211ENST00000567188 CCER1Q8TC90 406 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-211ENST00000567188 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-211ENST00000567188 TRIM41Q8WV44 630 aa9.21□□□□□ -0.93
CNOT1-211ENST00000567188 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
CNOT1-211ENST00000567188 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.95
CNOT1-211ENST00000567188 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
CNOT1-211ENST00000567188 WIZO95785 1651 aa9.08□□□□□ -0.96
CNOT1-211ENST00000567188 YTHDC1Q96MU7 727 aaKnown RBP9.07□□□□□ -0.96
CNOT1-211ENST00000567188 FBLN2P98095 1184 aa9.07□□□□□ -0.96
CNOT1-211ENST00000567188 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
CNOT1-211ENST00000567188 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
CNOT1-211ENST00000567188 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
CNOT1-211ENST00000567188 BAZ1BQ9UIG0 1483 aaKnown RBP8.98□□□□□ -0.97
CNOT1-211ENST00000567188 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
CNOT1-211ENST00000567188 ARID3CA6NKF2 412 aa8.96□□□□□ -0.97
CNOT1-211ENST00000567188 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
CNOT1-211ENST00000567188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
CNOT1-211ENST00000567188 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
CNOT1-211ENST00000567188 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
CNOT1-211ENST00000567188 APLP2Q06481 763 aa8.92□□□□□ -0.98
CNOT1-211ENST00000567188 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
CNOT1-211ENST00000567188 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-211ENST00000567188 SMARCA4P51532 1647 aa8.9□□□□□ -0.98
CNOT1-211ENST00000567188 P3H3Q8IVL6 736 aa8.9□□□□□ -0.98
CNOT1-211ENST00000567188 HRCP23327 699 aa8.89□□□□□ -0.99
CNOT1-211ENST00000567188 CHIC1Q5VXU3 224 aa8.89□□□□□ -0.99
CNOT1-211ENST00000567188 MYT1LQ9UL68 1186 aa8.86□□□□□ -0.99
CNOT1-211ENST00000567188 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-211ENST00000567188 ABCC8Q09428 1581 aa8.84□□□□□ -0.99
CNOT1-211ENST00000567188 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
CNOT1-211ENST00000567188 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
CNOT1-211ENST00000567188 ITGAEP38570 1179 aa8.83□□□□□ -1
CNOT1-211ENST00000567188 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
CNOT1-211ENST00000567188 CCDC88BA6NC98 1476 aa8.81□□□□□ -1
CNOT1-211ENST00000567188 DNAJC5BQ9UF47 199 aa8.81□□□□□ -1
CNOT1-211ENST00000567188 NEFLP07196 543 aa8.79□□□□□ -1
CNOT1-211ENST00000567188 TOP2AP11388 1531 aaKnown RBP8.76□□□□□ -1.01
CNOT1-211ENST00000567188 PLPPR3Q6T4P5 718 aa8.75□□□□□ -1.01
CNOT1-211ENST00000567188 PCGF6Q9BYE7 350 aa8.74□□□□□ -1.01
CNOT1-211ENST00000567188 GLIPR1L2Q4G1C9 344 aa8.73□□□□□ -1.01
CNOT1-211ENST00000567188 NESP48681 1621 aa8.73□□□□□ -1.01
CNOT1-211ENST00000567188 MYO15BQ96JP2 1530 aa8.72□□□□□ -1.01
CNOT1-211ENST00000567188 ATAD2BQ9ULI0 1458 aa8.72□□□□□ -1.01
CNOT1-211ENST00000567188 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
CNOT1-211ENST00000567188 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-211ENST00000567188 RTL5Q5HYW3 569 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-211ENST00000567188 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
CNOT1-211ENST00000567188 CEP164Q9UPV0 1460 aa8.62□□□□□ -1.03
CNOT1-211ENST00000567188 FANCD2Q9BXW9 1451 aa8.6□□□□□ -1.03
CNOT1-211ENST00000567188 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-211ENST00000567188 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
CNOT1-211ENST00000567188 KIF21AQ7Z4S6 1674 aa8.59□□□□□ -1.04
CNOT1-211ENST00000567188 SENP3Q9H4L4 574 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-211ENST00000567188 SOGA1O94964 1423 aa8.57□□□□□ -1.04
CNOT1-211ENST00000567188 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
CNOT1-211ENST00000567188 CUX2O14529 1486 aa8.56□□□□□ -1.04
CNOT1-211ENST00000567188 PDS5BQ9NTI5 1447 aa8.55□□□□□ -1.04
CNOT1-211ENST00000567188 CSRNP3Q8WYN3 585 aa8.55□□□□□ -1.04
CNOT1-211ENST00000567188 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
CNOT1-211ENST00000567188 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
CNOT1-211ENST00000567188 TRIM26Q12899 539 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-211ENST00000567188 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
CNOT1-211ENST00000567188 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
CNOT1-211ENST00000567188 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-211ENST00000567188 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-211ENST00000567188 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-211ENST00000567188 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
CNOT1-211ENST00000567188 PRDM2Q13029 1718 aa8.48□□□□□ -1.05
CNOT1-211ENST00000567188 AQRO60306 1485 aaKnown RBP eCLIP8.48□□□□□ -1.058e-7■■■■□ 22.2
CNOT1-211ENST00000567188 TRIM52Q96A61 297 aa8.48□□□□□ -1.05
CNOT1-211ENST00000567188 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
CNOT1-211ENST00000567188 SYNJ1O43426 1573 aa8.47□□□□□ -1.05
CNOT1-211ENST00000567188 FGD5Q6ZNL6 1462 aa8.46□□□□□ -1.05
CNOT1-211ENST00000567188 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
CNOT1-211ENST00000567188 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
CNOT1-211ENST00000567188 MRC2Q9UBG0 1479 aa8.45□□□□□ -1.06
CNOT1-211ENST00000567188 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
CNOT1-211ENST00000567188 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
CNOT1-211ENST00000567188 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
CNOT1-211ENST00000567188 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNOT1-211ENST00000567188 CHIC2Q9UKJ5 165 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms