RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
RAB6A-201ENST00000310653 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
RAB6A-201ENST00000310653 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.4
RAB6A-201ENST00000310653 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
RAB6A-201ENST00000310653 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
RAB6A-201ENST00000310653 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
RAB6A-201ENST00000310653 ABCC9O60706 1549 aa22.24■■□□□ 1.15
RAB6A-201ENST00000310653 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
RAB6A-201ENST00000310653 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
RAB6A-201ENST00000310653 MYO15BQ96JP2 1530 aa22.07■■□□□ 1.12
RAB6A-201ENST00000310653 SCRIBQ14160 1630 aa22■■□□□ 1.11
RAB6A-201ENST00000310653 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
RAB6A-201ENST00000310653 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
RAB6A-201ENST00000310653 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
RAB6A-201ENST00000310653 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
RAB6A-201ENST00000310653 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
RAB6A-201ENST00000310653 RSF1Q96T23 1441 aaPredicted RBP21.57■■□□□ 1.04
RAB6A-201ENST00000310653 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
RAB6A-201ENST00000310653 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
RAB6A-201ENST00000310653 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
RAB6A-201ENST00000310653 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
RAB6A-201ENST00000310653 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
RAB6A-201ENST00000310653 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
RAB6A-201ENST00000310653 NACADO15069 1562 aa21.21■□□□□ 0.99
RAB6A-201ENST00000310653 WIZO95785 1651 aa21.17■□□□□ 0.98
RAB6A-201ENST00000310653 HRCP23327 699 aa21.05■□□□□ 0.96
RAB6A-201ENST00000310653 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
RAB6A-201ENST00000310653 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
RAB6A-201ENST00000310653 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
RAB6A-201ENST00000310653 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
RAB6A-201ENST00000310653 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
RAB6A-201ENST00000310653 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
RAB6A-201ENST00000310653 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
RAB6A-201ENST00000310653 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
RAB6A-201ENST00000310653 SOGA1O94964 1423 aa20.63■□□□□ 0.89
RAB6A-201ENST00000310653 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
RAB6A-201ENST00000310653 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.89
RAB6A-201ENST00000310653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
RAB6A-201ENST00000310653 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
RAB6A-201ENST00000310653 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
RAB6A-201ENST00000310653 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
RAB6A-201ENST00000310653 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
RAB6A-201ENST00000310653 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
RAB6A-201ENST00000310653 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
RAB6A-201ENST00000310653 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
RAB6A-201ENST00000310653 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
RAB6A-201ENST00000310653 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
RAB6A-201ENST00000310653 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
RAB6A-201ENST00000310653 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
RAB6A-201ENST00000310653 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
RAB6A-201ENST00000310653 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
RAB6A-201ENST00000310653 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.8
RAB6A-201ENST00000310653 APLP2Q06481 763 aa19.99■□□□□ 0.79
RAB6A-201ENST00000310653 ITGAEP38570 1179 aa19.98■□□□□ 0.79
RAB6A-201ENST00000310653 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
RAB6A-201ENST00000310653 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
RAB6A-201ENST00000310653 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
RAB6A-201ENST00000310653 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
RAB6A-201ENST00000310653 CLIP1P30622 1438 aa19.94■□□□□ 0.78
RAB6A-201ENST00000310653 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
RAB6A-201ENST00000310653 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
RAB6A-201ENST00000310653 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
RAB6A-201ENST00000310653 EEA1Q15075 1411 aa19.82■□□□□ 0.76
RAB6A-201ENST00000310653 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
RAB6A-201ENST00000310653 CUX1P39880 1505 aa19.77■□□□□ 0.75
RAB6A-201ENST00000310653 NESP48681 1621 aa19.72■□□□□ 0.75
RAB6A-201ENST00000310653 CUX2O14529 1486 aa19.67■□□□□ 0.74
RAB6A-201ENST00000310653 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
RAB6A-201ENST00000310653 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
RAB6A-201ENST00000310653 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
RAB6A-201ENST00000310653 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
RAB6A-201ENST00000310653 CFTRP13569 1480 aa19.64■□□□□ 0.73
RAB6A-201ENST00000310653 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
RAB6A-201ENST00000310653 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
RAB6A-201ENST00000310653 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
RAB6A-201ENST00000310653 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
RAB6A-201ENST00000310653 KIF21BO75037 1637 aa19.62■□□□□ 0.73
RAB6A-201ENST00000310653 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
RAB6A-201ENST00000310653 ARAP1Q96P48 1450 aa19.58■□□□□ 0.73
RAB6A-201ENST00000310653 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
RAB6A-201ENST00000310653 IGF1RP08069 1367 aa19.55■□□□□ 0.72
RAB6A-201ENST00000310653 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
RAB6A-201ENST00000310653 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
RAB6A-201ENST00000310653 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
RAB6A-201ENST00000310653 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
RAB6A-201ENST00000310653 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
RAB6A-201ENST00000310653 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
RAB6A-201ENST00000310653 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
RAB6A-201ENST00000310653 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
RAB6A-201ENST00000310653 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
RAB6A-201ENST00000310653 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
RAB6A-201ENST00000310653 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
RAB6A-201ENST00000310653 MIER1Q8N108 512 aa19.38■□□□□ 0.69
RAB6A-201ENST00000310653 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
RAB6A-201ENST00000310653 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.69
RAB6A-201ENST00000310653 POLA1P09884 1462 aaPredicted RBP19.29■□□□□ 0.68
RAB6A-201ENST00000310653 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
RAB6A-201ENST00000310653 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
RAB6A-201ENST00000310653 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
RAB6A-201ENST00000310653 FBLN2P98095 1184 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms