RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
CHPT1-202ENST00000546490 CCDC180Q9P1Z9 1646 aa42.14■■■■■ 4.34
CHPT1-202ENST00000546490 ABCC9O60706 1549 aa41.74■■■■■ 4.27
CHPT1-202ENST00000546490 RB1CC1Q8TDY2 1594 aa39.93■■■■□ 3.98
CHPT1-202ENST00000546490 NACADO15069 1562 aa39.68■■■■□ 3.94
CHPT1-202ENST00000546490 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
CHPT1-202ENST00000546490 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
CHPT1-202ENST00000546490 UNC13AQ9UPW8 1703 aa39.13■■■■□ 3.85
CHPT1-202ENST00000546490 ZCCHC6Q5VYS8 1495 aaKnown RBP38.91■■■■□ 3.82
CHPT1-202ENST00000546490 DNAJC5BQ9UF47 199 aa38.81■■■■□ 3.8
CHPT1-202ENST00000546490 PABPN1Q86U42 306 aaKnown RBP eCLIP38.77■■■■□ 3.8
CHPT1-202ENST00000546490 DCAF1Q9Y4B6 1507 aa38.76■■■■□ 3.8
CHPT1-202ENST00000546490 BICRAQ9NZM4 1560 aa38.7■■■■□ 3.79
CHPT1-202ENST00000546490 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
CHPT1-202ENST00000546490 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
CHPT1-202ENST00000546490 CC2D2AQ9P2K1 1620 aa37.8■■■■□ 3.64
CHPT1-202ENST00000546490 EIF4G1Q04637 1599 aaKnown RBP37.77■■■■□ 3.64
CHPT1-202ENST00000546490 CECR2Q9BXF3 1484 aa37.6■■■■□ 3.61
CHPT1-202ENST00000546490 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
CHPT1-202ENST00000546490 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
CHPT1-202ENST00000546490 SMARCA2P51531 1590 aa36.47■■■■□ 3.43
CHPT1-202ENST00000546490 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
CHPT1-202ENST00000546490 BAZ1AQ9NRL2 1556 aaPredicted RBP36.41■■■■□ 3.42
CHPT1-202ENST00000546490 HMGXB3Q12766 1538 aa36.41■■■■□ 3.42
CHPT1-202ENST00000546490 PEG3Q9GZU2 1588 aa36.22■■■■□ 3.39
CHPT1-202ENST00000546490 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
CHPT1-202ENST00000546490 ERCC6Q03468 1493 aa36.08■■■■□ 3.37
CHPT1-202ENST00000546490 MROH2BQ7Z745 1585 aa36.07■■■■□ 3.37
CHPT1-202ENST00000546490 CUX2O14529 1486 aa35.98■■■■□ 3.35
CHPT1-202ENST00000546490 NESP48681 1621 aa35.9■■■■□ 3.34
CHPT1-202ENST00000546490 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
CHPT1-202ENST00000546490 WIZO95785 1651 aa35.72■■■■□ 3.31
CHPT1-202ENST00000546490 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
CHPT1-202ENST00000546490 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
CHPT1-202ENST00000546490 DNAJC5Q9H3Z4 198 aa35.57■■■■□ 3.28
CHPT1-202ENST00000546490 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
CHPT1-202ENST00000546490 CADPSQ9ULU8 1353 aa35.41■■■■□ 3.26
CHPT1-202ENST00000546490 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
CHPT1-202ENST00000546490 TOP2AP11388 1531 aaKnown RBP35.3■■■■□ 3.24
CHPT1-202ENST00000546490 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
CHPT1-202ENST00000546490 WDR62O43379 1518 aa35.16■■■■□ 3.22
CHPT1-202ENST00000546490 CEP164Q9UPV0 1460 aa35.14■■■■□ 3.22
CHPT1-202ENST00000546490 CFTRP13569 1480 aa35.09■■■■□ 3.21
CHPT1-202ENST00000546490 FANCD2Q9BXW9 1451 aa35.07■■■■□ 3.2
CHPT1-202ENST00000546490 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
CHPT1-202ENST00000546490 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
CHPT1-202ENST00000546490 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
CHPT1-202ENST00000546490 TOPBP1Q92547 1522 aa34.44■■■■□ 3.1
CHPT1-202ENST00000546490 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
CHPT1-202ENST00000546490 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
CHPT1-202ENST00000546490 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
CHPT1-202ENST00000546490 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
CHPT1-202ENST00000546490 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
CHPT1-202ENST00000546490 OSCARQ8IYS5 282 aa34.21■■■■□ 3.07
CHPT1-202ENST00000546490 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
CHPT1-202ENST00000546490 TRIM41Q8WV44 630 aa34.1■■■■□ 3.05
CHPT1-202ENST00000546490 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
CHPT1-202ENST00000546490 CHD1O14646 1710 aa33.99■■■■□ 3.03
CHPT1-202ENST00000546490 AQRO60306 1485 aaKnown RBP eCLIP33.95■■■■□ 3.031e-7■■■■■ 30.5
CHPT1-202ENST00000546490 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
CHPT1-202ENST00000546490 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
CHPT1-202ENST00000546490 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
CHPT1-202ENST00000546490 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
CHPT1-202ENST00000546490 CUX1P39880 1505 aa33.91■■■■□ 3.02
CHPT1-202ENST00000546490 FGD5Q6ZNL6 1462 aa33.91■■■■□ 3.02
CHPT1-202ENST00000546490 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
CHPT1-202ENST00000546490 SOGA1O94964 1423 aa33.87■■■■□ 3.01
CHPT1-202ENST00000546490 SUPT5HO00267 1087 aaKnown RBP33.83■■■■□ 3.01
CHPT1-202ENST00000546490 ARHGEF11O15085 1522 aa33.8■■■■□ 3
CHPT1-202ENST00000546490 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
CHPT1-202ENST00000546490 SNAPC4Q5SXM2 1469 aa33.7■■■□□ 2.99
CHPT1-202ENST00000546490 PBRM1Q86U86 1689 aa33.67■■■□□ 2.98
CHPT1-202ENST00000546490 FBLN2P98095 1184 aa33.66■■■□□ 2.98
CHPT1-202ENST00000546490 MAGI1Q96QZ7 1491 aaPredicted RBP33.65■■■□□ 2.98
CHPT1-202ENST00000546490 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
CHPT1-202ENST00000546490 ABCA5Q8WWZ7 1642 aa33.56■■■□□ 2.96
CHPT1-202ENST00000546490 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
CHPT1-202ENST00000546490 ABCA10Q8WWZ4 1543 aa33.54■■■□□ 2.96
CHPT1-202ENST00000546490 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
CHPT1-202ENST00000546490 GAPVD1Q14C86 1478 aa33.52■■■□□ 2.96
CHPT1-202ENST00000546490 CLASP1Q7Z460 1538 aa33.52■■■□□ 2.96
CHPT1-202ENST00000546490 SYNJ2O15056 1496 aa33.51■■■□□ 2.96
CHPT1-202ENST00000546490 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
CHPT1-202ENST00000546490 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
CHPT1-202ENST00000546490 ARAP1Q96P48 1450 aa33.45■■■□□ 2.95
CHPT1-202ENST00000546490 WRNQ14191 1432 aaPredicted RBP eCLIP33.41■■■□□ 2.941e-7■■■■■ 66.8
CHPT1-202ENST00000546490 CYB5RLQ6IPT4 315 aa33.37■■■□□ 2.93
CHPT1-202ENST00000546490 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
CHPT1-202ENST00000546490 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
CHPT1-202ENST00000546490 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
CHPT1-202ENST00000546490 CEP170Q5SW79 1584 aa33.1■■■□□ 2.89
CHPT1-202ENST00000546490 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
CHPT1-202ENST00000546490 NUP160Q12769 1436 aa33.07■■■□□ 2.88
CHPT1-202ENST00000546490 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
CHPT1-202ENST00000546490 TRHP20396 242 aaPredicted RBP32.98■■■□□ 2.87
CHPT1-202ENST00000546490 ERCC6L2Q5T890 1561 aa32.95■■■□□ 2.86
CHPT1-202ENST00000546490 RUSC2Q8N2Y8 1516 aa32.83■■■□□ 2.85
CHPT1-202ENST00000546490 CUL7Q14999 1698 aa32.81■■■□□ 2.84
CHPT1-202ENST00000546490 KIF27Q86VH2 1401 aa32.75■■■□□ 2.83
CHPT1-202ENST00000546490 PRG4Q92954 1404 aaPredicted RBP32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms