RNA–Protein interactions for RNA: ENST00000497156.5

ATP13A1-213, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 715 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-213ENST00000497156 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
ATP13A1-213ENST00000497156 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
ATP13A1-213ENST00000497156 ABCC9O60706 1549 aa33.32■■■□□ 2.92
ATP13A1-213ENST00000497156 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
ATP13A1-213ENST00000497156 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
ATP13A1-213ENST00000497156 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
ATP13A1-213ENST00000497156 NACADO15069 1562 aa32.42■■■□□ 2.78
ATP13A1-213ENST00000497156 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
ATP13A1-213ENST00000497156 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
ATP13A1-213ENST00000497156 DNAJC5BQ9UF47 199 aa31.69■■■□□ 2.66
ATP13A1-213ENST00000497156 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
ATP13A1-213ENST00000497156 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
ATP13A1-213ENST00000497156 SHROOM4Q9ULL8 1493 aa31.36■■■□□ 2.61
ATP13A1-213ENST00000497156 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
ATP13A1-213ENST00000497156 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.594e-8■■□□□ 11.5
ATP13A1-213ENST00000497156 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
ATP13A1-213ENST00000497156 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
ATP13A1-213ENST00000497156 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
ATP13A1-213ENST00000497156 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
ATP13A1-213ENST00000497156 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
ATP13A1-213ENST00000497156 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
ATP13A1-213ENST00000497156 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
ATP13A1-213ENST00000497156 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
ATP13A1-213ENST00000497156 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
ATP13A1-213ENST00000497156 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
ATP13A1-213ENST00000497156 SMARCA2P51531 1590 aa30■■■□□ 2.39
ATP13A1-213ENST00000497156 WIZO95785 1651 aa29.97■■■□□ 2.39
ATP13A1-213ENST00000497156 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
ATP13A1-213ENST00000497156 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
ATP13A1-213ENST00000497156 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
ATP13A1-213ENST00000497156 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
ATP13A1-213ENST00000497156 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
ATP13A1-213ENST00000497156 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
ATP13A1-213ENST00000497156 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
ATP13A1-213ENST00000497156 CFTRP13569 1480 aa29.03■■■□□ 2.24
ATP13A1-213ENST00000497156 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
ATP13A1-213ENST00000497156 NESP48681 1621 aa29.01■■■□□ 2.23
ATP13A1-213ENST00000497156 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
ATP13A1-213ENST00000497156 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
ATP13A1-213ENST00000497156 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
ATP13A1-213ENST00000497156 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
ATP13A1-213ENST00000497156 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
ATP13A1-213ENST00000497156 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
ATP13A1-213ENST00000497156 CUX2O14529 1486 aa28.59■■■□□ 2.17
ATP13A1-213ENST00000497156 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
ATP13A1-213ENST00000497156 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
ATP13A1-213ENST00000497156 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
ATP13A1-213ENST00000497156 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
ATP13A1-213ENST00000497156 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
ATP13A1-213ENST00000497156 WDR62O43379 1518 aa28.35■■■□□ 2.13
ATP13A1-213ENST00000497156 CUX1P39880 1505 aa28.35■■■□□ 2.13
ATP13A1-213ENST00000497156 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
ATP13A1-213ENST00000497156 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
ATP13A1-213ENST00000497156 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
ATP13A1-213ENST00000497156 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
ATP13A1-213ENST00000497156 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
ATP13A1-213ENST00000497156 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
ATP13A1-213ENST00000497156 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
ATP13A1-213ENST00000497156 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
ATP13A1-213ENST00000497156 POLA1P09884 1462 aaPredicted RBP28.13■■■□□ 2.09
ATP13A1-213ENST00000497156 SOGA1O94964 1423 aa28.06■■■□□ 2.08
ATP13A1-213ENST00000497156 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
ATP13A1-213ENST00000497156 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
ATP13A1-213ENST00000497156 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
ATP13A1-213ENST00000497156 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
ATP13A1-213ENST00000497156 WDR97A6NE52 1622 aa27.89■■■□□ 2.05
ATP13A1-213ENST00000497156 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
ATP13A1-213ENST00000497156 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
ATP13A1-213ENST00000497156 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.041e-6■■□□□ 13.1
ATP13A1-213ENST00000497156 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
ATP13A1-213ENST00000497156 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
ATP13A1-213ENST00000497156 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
ATP13A1-213ENST00000497156 GAPVD1Q14C86 1478 aa27.73■■■□□ 2.03
ATP13A1-213ENST00000497156 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
ATP13A1-213ENST00000497156 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
ATP13A1-213ENST00000497156 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
ATP13A1-213ENST00000497156 EEA1Q15075 1411 aa27.62■■■□□ 2.01
ATP13A1-213ENST00000497156 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
ATP13A1-213ENST00000497156 IGF1RP08069 1367 aa27.59■■■□□ 2.01
ATP13A1-213ENST00000497156 FAM9AQ8IZU1 332 aaPredicted RBP27.55■■■□□ 2
ATP13A1-213ENST00000497156 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
ATP13A1-213ENST00000497156 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
ATP13A1-213ENST00000497156 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
ATP13A1-213ENST00000497156 CUL7Q14999 1698 aa27.44■■□□□ 1.98
ATP13A1-213ENST00000497156 CARMIL1Q5VZK9 1371 aa27.43■■□□□ 1.98
ATP13A1-213ENST00000497156 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
ATP13A1-213ENST00000497156 ADAMTS12P58397 1594 aa27.42■■□□□ 1.98
ATP13A1-213ENST00000497156 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
ATP13A1-213ENST00000497156 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
ATP13A1-213ENST00000497156 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
ATP13A1-213ENST00000497156 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
ATP13A1-213ENST00000497156 FBLN2P98095 1184 aa27.32■■□□□ 1.96
ATP13A1-213ENST00000497156 CHD1O14646 1710 aa27.3■■□□□ 1.96
ATP13A1-213ENST00000497156 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
ATP13A1-213ENST00000497156 KIF21BO75037 1637 aa27.27■■□□□ 1.96
ATP13A1-213ENST00000497156 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
ATP13A1-213ENST00000497156 NUP160Q12769 1436 aa27.14■■□□□ 1.93
ATP13A1-213ENST00000497156 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
ATP13A1-213ENST00000497156 EHMT2Q96KQ7 1210 aa27.13■■□□□ 1.93
ATP13A1-213ENST00000497156 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms