RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
RAB6A-208ENST00000541795 CCDC180Q9P1Z9 1646 aa35.35■■■■□ 3.25
RAB6A-208ENST00000541795 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
RAB6A-208ENST00000541795 ABCC9O60706 1549 aa33.49■■■□□ 2.95
RAB6A-208ENST00000541795 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
RAB6A-208ENST00000541795 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
RAB6A-208ENST00000541795 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
RAB6A-208ENST00000541795 NACADO15069 1562 aa32.92■■■□□ 2.86
RAB6A-208ENST00000541795 SHROOM4Q9ULL8 1493 aa32.83■■■□□ 2.85
RAB6A-208ENST00000541795 RB1CC1Q8TDY2 1594 aa32.68■■■□□ 2.82
RAB6A-208ENST00000541795 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
RAB6A-208ENST00000541795 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
RAB6A-208ENST00000541795 BICRAQ9NZM4 1560 aa31.68■■■□□ 2.66
RAB6A-208ENST00000541795 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
RAB6A-208ENST00000541795 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
RAB6A-208ENST00000541795 CECR2Q9BXF3 1484 aa31.38■■■□□ 2.61
RAB6A-208ENST00000541795 RSF1Q96T23 1441 aaPredicted RBP31.27■■■□□ 2.6
RAB6A-208ENST00000541795 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
RAB6A-208ENST00000541795 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.59
RAB6A-208ENST00000541795 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
RAB6A-208ENST00000541795 WIZO95785 1651 aa30.97■■■□□ 2.55
RAB6A-208ENST00000541795 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
RAB6A-208ENST00000541795 PEG3Q9GZU2 1588 aa30.73■■■□□ 2.51
RAB6A-208ENST00000541795 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
RAB6A-208ENST00000541795 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
RAB6A-208ENST00000541795 ATAD2BQ9ULI0 1458 aa30.6■■■□□ 2.49
RAB6A-208ENST00000541795 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
RAB6A-208ENST00000541795 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
RAB6A-208ENST00000541795 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
RAB6A-208ENST00000541795 CC2D2AQ9P2K1 1620 aa30.32■■■□□ 2.44
RAB6A-208ENST00000541795 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
RAB6A-208ENST00000541795 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
RAB6A-208ENST00000541795 CFTRP13569 1480 aa29.65■■■□□ 2.34
RAB6A-208ENST00000541795 TRIM41Q8WV44 630 aa29.64■■■□□ 2.33
RAB6A-208ENST00000541795 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
RAB6A-208ENST00000541795 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
RAB6A-208ENST00000541795 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
RAB6A-208ENST00000541795 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
RAB6A-208ENST00000541795 WRNQ14191 1432 aaPredicted RBP eCLIP29.45■■■□□ 2.3
RAB6A-208ENST00000541795 LAMC3Q9Y6N6 1575 aa29.38■■■□□ 2.29
RAB6A-208ENST00000541795 NESP48681 1621 aa29.35■■■□□ 2.29
RAB6A-208ENST00000541795 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
RAB6A-208ENST00000541795 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
RAB6A-208ENST00000541795 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
RAB6A-208ENST00000541795 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
RAB6A-208ENST00000541795 CUX1P39880 1505 aa29.19■■■□□ 2.26
RAB6A-208ENST00000541795 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
RAB6A-208ENST00000541795 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
RAB6A-208ENST00000541795 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
RAB6A-208ENST00000541795 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
RAB6A-208ENST00000541795 SOGA1O94964 1423 aa29.02■■■□□ 2.24
RAB6A-208ENST00000541795 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
RAB6A-208ENST00000541795 EEA1Q15075 1411 aa28.96■■■□□ 2.23
RAB6A-208ENST00000541795 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
RAB6A-208ENST00000541795 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
RAB6A-208ENST00000541795 LOC105371045A0A1W2PR82 267 aa28.91■■■□□ 2.22
RAB6A-208ENST00000541795 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
RAB6A-208ENST00000541795 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
RAB6A-208ENST00000541795 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
RAB6A-208ENST00000541795 CSRNP3Q8WYN3 585 aa28.78■■■□□ 2.2
RAB6A-208ENST00000541795 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
RAB6A-208ENST00000541795 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
RAB6A-208ENST00000541795 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
RAB6A-208ENST00000541795 CUX2O14529 1486 aa28.68■■■□□ 2.18
RAB6A-208ENST00000541795 EHMT2Q96KQ7 1210 aa28.68■■■□□ 2.18
RAB6A-208ENST00000541795 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
RAB6A-208ENST00000541795 WDR62O43379 1518 aa28.64■■■□□ 2.18
RAB6A-208ENST00000541795 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
RAB6A-208ENST00000541795 KIF21BO75037 1637 aa28.62■■■□□ 2.17
RAB6A-208ENST00000541795 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
RAB6A-208ENST00000541795 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
RAB6A-208ENST00000541795 GOLGA3Q08378 1498 aa28.56■■■□□ 2.16
RAB6A-208ENST00000541795 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
RAB6A-208ENST00000541795 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
RAB6A-208ENST00000541795 RAPGEF2Q9Y4G8 1499 aa28.45■■■□□ 2.14
RAB6A-208ENST00000541795 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.14
RAB6A-208ENST00000541795 ABCA5Q8WWZ7 1642 aa28.44■■■□□ 2.14
RAB6A-208ENST00000541795 IGF1RP08069 1367 aa28.44■■■□□ 2.14
RAB6A-208ENST00000541795 TNIKQ9UKE5 1360 aa28.42■■■□□ 2.14
RAB6A-208ENST00000541795 UBTFP17480 764 aaKnown RBP28.41■■■□□ 2.14
RAB6A-208ENST00000541795 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
RAB6A-208ENST00000541795 TDRD9Q8NDG6 1382 aaKnown RBP28.38■■■□□ 2.13
RAB6A-208ENST00000541795 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
RAB6A-208ENST00000541795 CUL7Q14999 1698 aa28.32■■■□□ 2.12
RAB6A-208ENST00000541795 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
RAB6A-208ENST00000541795 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
RAB6A-208ENST00000541795 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
RAB6A-208ENST00000541795 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
RAB6A-208ENST00000541795 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
RAB6A-208ENST00000541795 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
RAB6A-208ENST00000541795 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
RAB6A-208ENST00000541795 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
RAB6A-208ENST00000541795 CLIP1P30622 1438 aa28.09■■■□□ 2.09
RAB6A-208ENST00000541795 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
RAB6A-208ENST00000541795 CTTNBP2Q8WZ74 1663 aa28■■■□□ 2.07
RAB6A-208ENST00000541795 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
RAB6A-208ENST00000541795 RANGAP1P46060 587 aaPredicted RBP27.98■■■□□ 2.07
RAB6A-208ENST00000541795 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
RAB6A-208ENST00000541795 ARHGAP35Q9NRY4 1499 aa27.85■■■□□ 2.05
RAB6A-208ENST00000541795 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms