RNA–Protein interactions for RNA: ENST00000496082.5

ATP13A1-212, Transcript of ATPase 13A1, humanhuman

TSL 4

Gene ATP13A1, Length 698 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-212ENST00000496082 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
ATP13A1-212ENST00000496082 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
ATP13A1-212ENST00000496082 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
ATP13A1-212ENST00000496082 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
ATP13A1-212ENST00000496082 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
ATP13A1-212ENST00000496082 ABCC9O60706 1549 aa22.06■■□□□ 1.12
ATP13A1-212ENST00000496082 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
ATP13A1-212ENST00000496082 NACADO15069 1562 aa21.87■■□□□ 1.09
ATP13A1-212ENST00000496082 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
ATP13A1-212ENST00000496082 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
ATP13A1-212ENST00000496082 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
ATP13A1-212ENST00000496082 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
ATP13A1-212ENST00000496082 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
ATP13A1-212ENST00000496082 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
ATP13A1-212ENST00000496082 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.914e-8■■□□□ 11.5
ATP13A1-212ENST00000496082 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
ATP13A1-212ENST00000496082 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
ATP13A1-212ENST00000496082 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
ATP13A1-212ENST00000496082 MROH2BQ7Z745 1585 aa20.64■□□□□ 0.9
ATP13A1-212ENST00000496082 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
ATP13A1-212ENST00000496082 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
ATP13A1-212ENST00000496082 WIZO95785 1651 aa20.42■□□□□ 0.86
ATP13A1-212ENST00000496082 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
ATP13A1-212ENST00000496082 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
ATP13A1-212ENST00000496082 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
ATP13A1-212ENST00000496082 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
ATP13A1-212ENST00000496082 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
ATP13A1-212ENST00000496082 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
ATP13A1-212ENST00000496082 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
ATP13A1-212ENST00000496082 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
ATP13A1-212ENST00000496082 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
ATP13A1-212ENST00000496082 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
ATP13A1-212ENST00000496082 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
ATP13A1-212ENST00000496082 CFTRP13569 1480 aa19.69■□□□□ 0.74
ATP13A1-212ENST00000496082 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
ATP13A1-212ENST00000496082 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
ATP13A1-212ENST00000496082 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
ATP13A1-212ENST00000496082 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
ATP13A1-212ENST00000496082 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
ATP13A1-212ENST00000496082 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
ATP13A1-212ENST00000496082 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
ATP13A1-212ENST00000496082 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
ATP13A1-212ENST00000496082 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
ATP13A1-212ENST00000496082 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
ATP13A1-212ENST00000496082 EEA1Q15075 1411 aa19.37■□□□□ 0.69
ATP13A1-212ENST00000496082 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
ATP13A1-212ENST00000496082 NESP48681 1621 aa19.33■□□□□ 0.68
ATP13A1-212ENST00000496082 CUX1P39880 1505 aa19.32■□□□□ 0.68
ATP13A1-212ENST00000496082 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
ATP13A1-212ENST00000496082 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
ATP13A1-212ENST00000496082 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
ATP13A1-212ENST00000496082 SOGA1O94964 1423 aa19.21■□□□□ 0.67
ATP13A1-212ENST00000496082 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
ATP13A1-212ENST00000496082 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
ATP13A1-212ENST00000496082 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
ATP13A1-212ENST00000496082 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
ATP13A1-212ENST00000496082 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
ATP13A1-212ENST00000496082 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
ATP13A1-212ENST00000496082 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
ATP13A1-212ENST00000496082 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
ATP13A1-212ENST00000496082 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
ATP13A1-212ENST00000496082 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.64
ATP13A1-212ENST00000496082 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
ATP13A1-212ENST00000496082 KIF21BO75037 1637 aa19.03■□□□□ 0.64
ATP13A1-212ENST00000496082 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
ATP13A1-212ENST00000496082 GOLGA3Q08378 1498 aa19.02■□□□□ 0.63
ATP13A1-212ENST00000496082 CUX2O14529 1486 aa19■□□□□ 0.63
ATP13A1-212ENST00000496082 ERCC6Q03468 1493 aa19■□□□□ 0.63
ATP13A1-212ENST00000496082 WDR62O43379 1518 aa18.99■□□□□ 0.63
ATP13A1-212ENST00000496082 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
ATP13A1-212ENST00000496082 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
ATP13A1-212ENST00000496082 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
ATP13A1-212ENST00000496082 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
ATP13A1-212ENST00000496082 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
ATP13A1-212ENST00000496082 IGF1RP08069 1367 aa18.89■□□□□ 0.61
ATP13A1-212ENST00000496082 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
ATP13A1-212ENST00000496082 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
ATP13A1-212ENST00000496082 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
ATP13A1-212ENST00000496082 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
ATP13A1-212ENST00000496082 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
ATP13A1-212ENST00000496082 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
ATP13A1-212ENST00000496082 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
ATP13A1-212ENST00000496082 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
ATP13A1-212ENST00000496082 CUL7Q14999 1698 aa18.8■□□□□ 0.6
ATP13A1-212ENST00000496082 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
ATP13A1-212ENST00000496082 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
ATP13A1-212ENST00000496082 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
ATP13A1-212ENST00000496082 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
ATP13A1-212ENST00000496082 CLIP1P30622 1438 aa18.67■□□□□ 0.58
ATP13A1-212ENST00000496082 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
ATP13A1-212ENST00000496082 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
ATP13A1-212ENST00000496082 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■□□□ 13.1
ATP13A1-212ENST00000496082 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
ATP13A1-212ENST00000496082 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
ATP13A1-212ENST00000496082 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
ATP13A1-212ENST00000496082 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
ATP13A1-212ENST00000496082 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
ATP13A1-212ENST00000496082 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
ATP13A1-212ENST00000496082 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
ATP13A1-212ENST00000496082 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms