RNA–Protein interactions for RNA: ENST00000536566.5

RAB6A-204, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB6A, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-204ENST00000536566 NISCHQ9Y2I1 1504 aa52.97■■■■■ 6.07
RAB6A-204ENST00000536566 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
RAB6A-204ENST00000536566 ABCC9O60706 1549 aa45.64■■■■■ 4.9
RAB6A-204ENST00000536566 ZCCHC6Q5VYS8 1495 aaKnown RBP44.2■■■■■ 4.67
RAB6A-204ENST00000536566 NACADO15069 1562 aa44.17■■■■■ 4.66
RAB6A-204ENST00000536566 RB1CC1Q8TDY2 1594 aa44.11■■■■■ 4.65
RAB6A-204ENST00000536566 MYO15BQ96JP2 1530 aa44.09■■■■■ 4.65
RAB6A-204ENST00000536566 DCAF8L2P0C7V8 631 aa43.98■■■■■ 4.63
RAB6A-204ENST00000536566 DCAF1Q9Y4B6 1507 aa43.95■■■■■ 4.63
RAB6A-204ENST00000536566 UNC13AQ9UPW8 1703 aa42.98■■■■■ 4.47
RAB6A-204ENST00000536566 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
RAB6A-204ENST00000536566 BICRAQ9NZM4 1560 aa42.73■■■■■ 4.43
RAB6A-204ENST00000536566 PABPN1Q86U42 306 aaKnown RBP eCLIP42.66■■■■■ 4.42
RAB6A-204ENST00000536566 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
RAB6A-204ENST00000536566 DNAJC5BQ9UF47 199 aa41.66■■■■■ 4.26
RAB6A-204ENST00000536566 EIF4G1Q04637 1599 aaKnown RBP41.6■■■■■ 4.25
RAB6A-204ENST00000536566 CC2D2AQ9P2K1 1620 aa41.33■■■■■ 4.21
RAB6A-204ENST00000536566 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
RAB6A-204ENST00000536566 BAZ1AQ9NRL2 1556 aaPredicted RBP41.06■■■■■ 4.16
RAB6A-204ENST00000536566 SMARCA4P51532 1647 aa41.02■■■■■ 4.16
RAB6A-204ENST00000536566 NCAPD3P42695 1498 aa40.77■■■■■ 4.12
RAB6A-204ENST00000536566 MROH2BQ7Z745 1585 aa40.77■■■■■ 4.12
RAB6A-204ENST00000536566 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
RAB6A-204ENST00000536566 SMARCA2P51531 1590 aa40.76■■■■■ 4.12
RAB6A-204ENST00000536566 PEG3Q9GZU2 1588 aa40.72■■■■■ 4.11
RAB6A-204ENST00000536566 HMGXB3Q12766 1538 aa40.57■■■■■ 4.09
RAB6A-204ENST00000536566 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
RAB6A-204ENST00000536566 BAZ1BQ9UIG0 1483 aaKnown RBP40.43■■■■■ 4.06
RAB6A-204ENST00000536566 WIZO95785 1651 aa40.29■■■■■ 4.04
RAB6A-204ENST00000536566 TOP2AP11388 1531 aaKnown RBP39.98■■■■□ 3.99
RAB6A-204ENST00000536566 LAMC3Q9Y6N6 1575 aa39.61■■■■□ 3.93
RAB6A-204ENST00000536566 CADPSQ9ULU8 1353 aa39.56■■■■□ 3.92
RAB6A-204ENST00000536566 NESP48681 1621 aa39.55■■■■□ 3.92
RAB6A-204ENST00000536566 CCDC88BA6NC98 1476 aa39.48■■■■□ 3.91
RAB6A-204ENST00000536566 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
RAB6A-204ENST00000536566 CFTRP13569 1480 aa39.39■■■■□ 3.9
RAB6A-204ENST00000536566 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
RAB6A-204ENST00000536566 ERCC6Q03468 1493 aa39.35■■■■□ 3.89
RAB6A-204ENST00000536566 KIF21AQ7Z4S6 1674 aa39.09■■■■□ 3.85
RAB6A-204ENST00000536566 FANCD2Q9BXW9 1451 aa39.06■■■■□ 3.84
RAB6A-204ENST00000536566 PRDM2Q13029 1718 aa39.01■■■■□ 3.84
RAB6A-204ENST00000536566 CEP164Q9UPV0 1460 aa38.99■■■■□ 3.83
RAB6A-204ENST00000536566 THOC2Q8NI27 1593 aaKnown RBP38.97■■■■□ 3.83
RAB6A-204ENST00000536566 CUX2O14529 1486 aa38.95■■■■□ 3.83
RAB6A-204ENST00000536566 MRC2Q9UBG0 1479 aa38.9■■■■□ 3.82
RAB6A-204ENST00000536566 WDR62O43379 1518 aa38.78■■■■□ 3.8
RAB6A-204ENST00000536566 URB2Q14146 1524 aaKnown RBP38.63■■■■□ 3.78
RAB6A-204ENST00000536566 ABCC8Q09428 1581 aa38.57■■■■□ 3.76
RAB6A-204ENST00000536566 TOPBP1Q92547 1522 aa38.46■■■■□ 3.75
RAB6A-204ENST00000536566 DNMBPQ6XZF7 1577 aa38.45■■■■□ 3.75
RAB6A-204ENST00000536566 CUX1P39880 1505 aa38.24■■■■□ 3.71
RAB6A-204ENST00000536566 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
RAB6A-204ENST00000536566 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
RAB6A-204ENST00000536566 WRNQ14191 1432 aaPredicted RBP eCLIP38.12■■■■□ 3.69
RAB6A-204ENST00000536566 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
RAB6A-204ENST00000536566 TARBP1Q13395 1621 aaKnown RBP38.03■■■■□ 3.68
RAB6A-204ENST00000536566 TOP2BQ02880 1626 aa38.01■■■■□ 3.68
RAB6A-204ENST00000536566 SOGA1O94964 1423 aa38■■■■□ 3.67
RAB6A-204ENST00000536566 BIVM-ERCC5R4GMW8 1640 aa38■■■■□ 3.67
RAB6A-204ENST00000536566 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
RAB6A-204ENST00000536566 RAD54L2Q9Y4B4 1467 aa37.92■■■■□ 3.66
RAB6A-204ENST00000536566 ZNF608Q9ULD9 1512 aaPredicted RBP37.92■■■■□ 3.66
RAB6A-204ENST00000536566 WDR97A6NE52 1622 aa37.85■■■■□ 3.65
RAB6A-204ENST00000536566 EIF4G3O43432 1585 aaKnown RBP37.8■■■■□ 3.64
RAB6A-204ENST00000536566 ABCA10Q8WWZ4 1543 aa37.78■■■■□ 3.64
RAB6A-204ENST00000536566 AQRO60306 1485 aaKnown RBP eCLIP37.74■■■■□ 3.63
RAB6A-204ENST00000536566 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
RAB6A-204ENST00000536566 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
RAB6A-204ENST00000536566 ABCA5Q8WWZ7 1642 aa37.58■■■■□ 3.61
RAB6A-204ENST00000536566 GRIN2BQ13224 1484 aa37.56■■■■□ 3.6
RAB6A-204ENST00000536566 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
RAB6A-204ENST00000536566 DNAJC5Q9H3Z4 198 aa37.43■■■■□ 3.58
RAB6A-204ENST00000536566 SNAPC4Q5SXM2 1469 aa37.41■■■■□ 3.58
RAB6A-204ENST00000536566 PBRM1Q86U86 1689 aa37.41■■■■□ 3.58
RAB6A-204ENST00000536566 ERICH3Q5RHP9 1530 aa37.35■■■■□ 3.57
RAB6A-204ENST00000536566 OSCARQ8IYS5 282 aa37.34■■■■□ 3.57
RAB6A-204ENST00000536566 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
RAB6A-204ENST00000536566 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
RAB6A-204ENST00000536566 SYNJ2O15056 1496 aa37.29■■■■□ 3.56
RAB6A-204ENST00000536566 CHD1O14646 1710 aa37.21■■■■□ 3.55
RAB6A-204ENST00000536566 CHMP7Q8WUX9 453 aaPredicted RBP37.2■■■■□ 3.55
RAB6A-204ENST00000536566 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
RAB6A-204ENST00000536566 ADAMTS12P58397 1594 aa37.18■■■■□ 3.54
RAB6A-204ENST00000536566 FBLN2P98095 1184 aa37.18■■■■□ 3.54
RAB6A-204ENST00000536566 IGF1RP08069 1367 aa37.14■■■■□ 3.54
RAB6A-204ENST00000536566 GRIN2AQ12879 1464 aa37.07■■■■□ 3.52
RAB6A-204ENST00000536566 CHIC1Q5VXU3 224 aa37.04■■■■□ 3.52
RAB6A-204ENST00000536566 CUL7Q14999 1698 aa37.02■■■■□ 3.52
RAB6A-204ENST00000536566 RUSC2Q8N2Y8 1516 aa36.94■■■■□ 3.5
RAB6A-204ENST00000536566 NUP160Q12769 1436 aa36.93■■■■□ 3.5
RAB6A-204ENST00000536566 CLASP1Q7Z460 1538 aa36.92■■■■□ 3.5
RAB6A-204ENST00000536566 CARMIL1Q5VZK9 1371 aa36.91■■■■□ 3.5
RAB6A-204ENST00000536566 EEA1Q15075 1411 aa36.83■■■■□ 3.49
RAB6A-204ENST00000536566 CEP170Q5SW79 1584 aa36.82■■■■□ 3.48
RAB6A-204ENST00000536566 RAPGEF2Q9Y4G8 1499 aa36.73■■■■□ 3.47
RAB6A-204ENST00000536566 ARHGEF11O15085 1522 aa36.7■■■■□ 3.47
RAB6A-204ENST00000536566 PRXQ9BXM0 1461 aa36.69■■■■□ 3.46
RAB6A-204ENST00000536566 CSRNP3Q8WYN3 585 aa36.67■■■■□ 3.46
RAB6A-204ENST00000536566 RIMBP3CA6NJZ7 1639 aa36.63■■■■□ 3.45
RAB6A-204ENST00000536566 RIMBP3BA6NNM3 1639 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms