RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-206ENST00000540771 NISCHQ9Y2I1 1504 aa53.52■■■■■ 6.16
RAB6A-206ENST00000540771 CCDC180Q9P1Z9 1646 aa47.32■■■■■ 5.17
RAB6A-206ENST00000540771 ABCC9O60706 1549 aa45.94■■■■■ 4.95
RAB6A-206ENST00000540771 ZCCHC6Q5VYS8 1495 aaKnown RBP44.66■■■■■ 4.74
RAB6A-206ENST00000540771 DCAF8L2P0C7V8 631 aa44.57■■■■■ 4.73
RAB6A-206ENST00000540771 NACADO15069 1562 aa44.45■■■■■ 4.71
RAB6A-206ENST00000540771 RB1CC1Q8TDY2 1594 aa44.38■■■■■ 4.69
RAB6A-206ENST00000540771 MYO15BQ96JP2 1530 aa44.36■■■■■ 4.69
RAB6A-206ENST00000540771 DCAF1Q9Y4B6 1507 aa44.32■■■■■ 4.69
RAB6A-206ENST00000540771 UNC13AQ9UPW8 1703 aa43.28■■■■■ 4.52
RAB6A-206ENST00000540771 SCRIBQ14160 1630 aa43.2■■■■■ 4.51
RAB6A-206ENST00000540771 PABPN1Q86U42 306 aaKnown RBP eCLIP43.05■■■■■ 4.48
RAB6A-206ENST00000540771 BICRAQ9NZM4 1560 aa43.03■■■■■ 4.48
RAB6A-206ENST00000540771 SHROOM4Q9ULL8 1493 aa42.64■■■■■ 4.42
RAB6A-206ENST00000540771 DNAJC5BQ9UF47 199 aa41.86■■■■■ 4.29
RAB6A-206ENST00000540771 EIF4G1Q04637 1599 aaKnown RBP41.84■■■■■ 4.29
RAB6A-206ENST00000540771 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
RAB6A-206ENST00000540771 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
RAB6A-206ENST00000540771 BAZ1AQ9NRL2 1556 aaPredicted RBP41.44■■■■■ 4.22
RAB6A-206ENST00000540771 SMARCA4P51532 1647 aa41.4■■■■■ 4.22
RAB6A-206ENST00000540771 MROH2BQ7Z745 1585 aa41.25■■■■■ 4.19
RAB6A-206ENST00000540771 ATAD2BQ9ULI0 1458 aa41.12■■■■■ 4.17
RAB6A-206ENST00000540771 NCAPD3P42695 1498 aa41.06■■■■■ 4.16
RAB6A-206ENST00000540771 SMARCA2P51531 1590 aa41.06■■■■■ 4.16
RAB6A-206ENST00000540771 PEG3Q9GZU2 1588 aa41.02■■■■■ 4.16
RAB6A-206ENST00000540771 RSF1Q96T23 1441 aaPredicted RBP40.96■■■■■ 4.15
RAB6A-206ENST00000540771 HMGXB3Q12766 1538 aa40.83■■■■■ 4.13
RAB6A-206ENST00000540771 WIZO95785 1651 aa40.78■■■■■ 4.12
RAB6A-206ENST00000540771 BAZ1BQ9UIG0 1483 aaKnown RBP40.77■■■■■ 4.12
RAB6A-206ENST00000540771 TOP2AP11388 1531 aaKnown RBP40.4■■■■■ 4.06
RAB6A-206ENST00000540771 SUPT5HO00267 1087 aaKnown RBP40.24■■■■■ 4.03
RAB6A-206ENST00000540771 CCDC88BA6NC98 1476 aa39.95■■■■□ 3.99
RAB6A-206ENST00000540771 NESP48681 1621 aa39.88■■■■□ 3.97
RAB6A-206ENST00000540771 CADPSQ9ULU8 1353 aa39.88■■■■□ 3.97
RAB6A-206ENST00000540771 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
RAB6A-206ENST00000540771 CFTRP13569 1480 aa39.72■■■■□ 3.95
RAB6A-206ENST00000540771 PDS5BQ9NTI5 1447 aa39.61■■■■□ 3.93
RAB6A-206ENST00000540771 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
RAB6A-206ENST00000540771 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.9
RAB6A-206ENST00000540771 KIF21AQ7Z4S6 1674 aa39.35■■■■□ 3.89
RAB6A-206ENST00000540771 PRDM2Q13029 1718 aa39.3■■■■□ 3.88
RAB6A-206ENST00000540771 CEP164Q9UPV0 1460 aa39.29■■■■□ 3.88
RAB6A-206ENST00000540771 THOC2Q8NI27 1593 aaKnown RBP39.15■■■■□ 3.86
RAB6A-206ENST00000540771 MRC2Q9UBG0 1479 aa39.14■■■■□ 3.86
RAB6A-206ENST00000540771 CUX2O14529 1486 aa39.01■■■■□ 3.84
RAB6A-206ENST00000540771 WDR62O43379 1518 aa38.99■■■■□ 3.83
RAB6A-206ENST00000540771 URB2Q14146 1524 aaKnown RBP38.96■■■■□ 3.83
RAB6A-206ENST00000540771 ABCC8Q09428 1581 aa38.85■■■■□ 3.81
RAB6A-206ENST00000540771 TOPBP1Q92547 1522 aa38.79■■■■□ 3.8
RAB6A-206ENST00000540771 DNMBPQ6XZF7 1577 aa38.77■■■■□ 3.8
RAB6A-206ENST00000540771 CUX1P39880 1505 aa38.66■■■■□ 3.78
RAB6A-206ENST00000540771 WRNQ14191 1432 aaPredicted RBP eCLIP38.59■■■■□ 3.77
RAB6A-206ENST00000540771 POLA1P09884 1462 aaPredicted RBP38.5■■■■□ 3.75
RAB6A-206ENST00000540771 IFT140Q96RY7 1462 aa38.47■■■■□ 3.75
RAB6A-206ENST00000540771 FGD5Q6ZNL6 1462 aa38.46■■■■□ 3.75
RAB6A-206ENST00000540771 TOP2BQ02880 1626 aa38.43■■■■□ 3.74
RAB6A-206ENST00000540771 SYNJ1O43426 1573 aa38.42■■■■□ 3.74
RAB6A-206ENST00000540771 BIVM-ERCC5R4GMW8 1640 aa38.4■■■■□ 3.74
RAB6A-206ENST00000540771 SOGA1O94964 1423 aa38.38■■■■□ 3.74
RAB6A-206ENST00000540771 RAD54L2Q9Y4B4 1467 aa38.34■■■■□ 3.73
RAB6A-206ENST00000540771 TARBP1Q13395 1621 aaKnown RBP38.32■■■■□ 3.73
RAB6A-206ENST00000540771 ZNF608Q9ULD9 1512 aaPredicted RBP38.23■■■■□ 3.71
RAB6A-206ENST00000540771 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
RAB6A-206ENST00000540771 TDRD9Q8NDG6 1382 aaKnown RBP38.11■■■■□ 3.69
RAB6A-206ENST00000540771 AQRO60306 1485 aaKnown RBP eCLIP38.1■■■■□ 3.69
RAB6A-206ENST00000540771 WDR97A6NE52 1622 aa38.06■■■■□ 3.68
RAB6A-206ENST00000540771 EIF4G3O43432 1585 aaKnown RBP38.06■■■■□ 3.68
RAB6A-206ENST00000540771 TRIM41Q8WV44 630 aa38.01■■■■□ 3.68
RAB6A-206ENST00000540771 GAPVD1Q14C86 1478 aa37.92■■■■□ 3.66
RAB6A-206ENST00000540771 ABCA5Q8WWZ7 1642 aa37.89■■■■□ 3.66
RAB6A-206ENST00000540771 GRIN2BQ13224 1484 aa37.87■■■■□ 3.65
RAB6A-206ENST00000540771 CHIC1Q5VXU3 224 aa37.84■■■■□ 3.65
RAB6A-206ENST00000540771 KIF27Q86VH2 1401 aa37.77■■■■□ 3.64
RAB6A-206ENST00000540771 SNAPC4Q5SXM2 1469 aa37.72■■■■□ 3.63
RAB6A-206ENST00000540771 PBRM1Q86U86 1689 aa37.72■■■■□ 3.63
RAB6A-206ENST00000540771 MAGI1Q96QZ7 1491 aaPredicted RBP37.71■■■■□ 3.63
RAB6A-206ENST00000540771 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
RAB6A-206ENST00000540771 IGF1RP08069 1367 aa37.59■■■■□ 3.61
RAB6A-206ENST00000540771 FBLN2P98095 1184 aa37.56■■■■□ 3.6
RAB6A-206ENST00000540771 SYNJ2O15056 1496 aa37.56■■■■□ 3.6
RAB6A-206ENST00000540771 CHMP7Q8WUX9 453 aaPredicted RBP37.55■■■■□ 3.6
RAB6A-206ENST00000540771 OSCARQ8IYS5 282 aa37.54■■■■□ 3.6
RAB6A-206ENST00000540771 RUSC2Q8N2Y8 1516 aa37.54■■■■□ 3.6
RAB6A-206ENST00000540771 FHAD1B1AJZ9 1412 aa37.52■■■■□ 3.6
RAB6A-206ENST00000540771 ADAMTS12P58397 1594 aa37.49■■■■□ 3.59
RAB6A-206ENST00000540771 CHD1O14646 1710 aa37.46■■■■□ 3.59
RAB6A-206ENST00000540771 DNAJC5Q9H3Z4 198 aa37.39■■■■□ 3.58
RAB6A-206ENST00000540771 GRIN2AQ12879 1464 aa37.37■■■■□ 3.57
RAB6A-206ENST00000540771 CARMIL1Q5VZK9 1371 aa37.36■■■■□ 3.57
RAB6A-206ENST00000540771 CUL7Q14999 1698 aa37.36■■■■□ 3.57
RAB6A-206ENST00000540771 EEA1Q15075 1411 aa37.33■■■■□ 3.57
RAB6A-206ENST00000540771 CSRNP3Q8WYN3 585 aa37.26■■■■□ 3.56
RAB6A-206ENST00000540771 NUP160Q12769 1436 aa37.2■■■■□ 3.55
RAB6A-206ENST00000540771 FAM9AQ8IZU1 332 aaPredicted RBP37.18■■■■□ 3.54
RAB6A-206ENST00000540771 RAPGEF2Q9Y4G8 1499 aa37.16■■■■□ 3.54
RAB6A-206ENST00000540771 PRXQ9BXM0 1461 aa37.15■■■■□ 3.54
RAB6A-206ENST00000540771 CEP170Q5SW79 1584 aa37.13■■■■□ 3.53
RAB6A-206ENST00000540771 CLASP1Q7Z460 1538 aa37.13■■■■□ 3.53
RAB6A-206ENST00000540771 KIAA0586Q9BVV6 1533 aa36.96■■■■□ 3.51
RAB6A-206ENST00000540771 JPH4Q96JJ6 628 aa36.87■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms