Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 RPL28-202ENST00000426763 5620 ntTSL 1 (best)14.78□□□□□ -0.042e-11■■■□□ 17.4
NKRFO15226 RPL28-201ENST00000344063 4796 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.612e-11■■■□□ 17.4
NKRFO15226 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.441e-6■■■□□ 17.4
NKRFO15226 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.351e-6■■■□□ 17.4
NKRFO15226 SDF4-206ENST00000478938 2591 ntTSL 223.26■■□□□ 1.315e-6■■■□□ 17.4
NKRFO15226 SDF4-207ENST00000494748 3516 ntTSL 217.21■□□□□ 0.345e-6■■■□□ 17.4
NKRFO15226 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.372e-6■■■□□ 17.4
NKRFO15226 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.96■■□□□ 1.111e-6■■■□□ 17.4
NKRFO15226 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.46■■□□□ 1.352e-8■■■□□ 17.4
NKRFO15226 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.952e-8■■■□□ 17.4
NKRFO15226 TFDP1-203ENST00000453989 792 ntTSL 327.6■■■□□ 2.017e-9■■■□□ 17.4
NKRFO15226 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.451e-6■■■□□ 17.3
NKRFO15226 NDST1-203ENST00000518346 496 ntTSL 317.39■□□□□ 0.374e-6■■■□□ 17.3
NKRFO15226 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.343e-6■■■□□ 17.3
NKRFO15226 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.263e-6■■■□□ 17.3
NKRFO15226 PRR5-204ENST00000403696 789 ntTSL 328.33■■■□□ 2.132e-6■■■□□ 17.3
NKRFO15226 TFDP1-202ENST00000408980 866 ntTSL 526.67■■□□□ 1.865e-9■■■□□ 17.3
NKRFO15226 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.678e-10■■■□□ 17.3
NKRFO15226 ZEB1-221ENST00000561061 970 ntTSL 1 (best)7.86□□□□□ -1.151e-6■■■□□ 17.3
NKRFO15226 ZEB1-212ENST00000558655 2773 ntTSL 24.52□□□□□ -1.691e-6■■■□□ 17.3
NKRFO15226 PRMT1-206ENST00000526224 578 ntTSL 312□□□□□ -0.493e-6■■■□□ 17.3
NKRFO15226 SYNJ2-205ENST00000449320 680 ntTSL 48.89□□□□□ -0.993e-6■■■□□ 17.3
NKRFO15226 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.56e-7■■■□□ 17.3
NKRFO15226 ATP2B1-209ENST00000551310 607 ntTSL 318.83■□□□□ 0.67e-7■■■□□ 17.2
NKRFO15226 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.94■■□□□ 1.263e-6■■■□□ 17.2
NKRFO15226 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.89■□□□□ 0.933e-6■■■□□ 17.2
NKRFO15226 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.893e-6■■■□□ 17.2
NKRFO15226 GLYCTK-208ENST00000486393 2019 ntTSL 1 (best)19.41■□□□□ 0.73e-6■■■□□ 17.2
NKRFO15226 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.61■□□□□ 0.573e-6■■■□□ 17.2
NKRFO15226 GLYCTK-209ENST00000489173 2083 ntTSL 518.46■□□□□ 0.553e-6■■■□□ 17.2
NKRFO15226 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.38■□□□□ 0.373e-6■■■□□ 17.2
NKRFO15226 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.98■□□□□ 0.153e-6■■■□□ 17.2
NKRFO15226 AKT2-216ENST00000476266 3309 ntTSL 514.1□□□□□ -0.151e-9■■■□□ 17.2
NKRFO15226 AKT2-218ENST00000483166 4454 ntTSL 213.49□□□□□ -0.251e-9■■■□□ 17.2
NKRFO15226 MICAL3-205ENST00000424046 542 ntTSL 419.94■□□□□ 0.787e-7■■■□□ 17.2
NKRFO15226 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.027e-7■■■□□ 17.2
NKRFO15226 MICAL3-210ENST00000495076 5113 ntTSL 511.44□□□□□ -0.587e-7■■■□□ 17.2
NKRFO15226 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.31e-6■■■□□ 17.2
NKRFO15226 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)23.05■■□□□ 1.281e-6■■■□□ 17.2
NKRFO15226 CCDC85C-206ENST00000557576 656 ntTSL 218.53■□□□□ 0.561e-6■■■□□ 17.2
NKRFO15226 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.843e-6■■■□□ 17.2
NKRFO15226 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.99■■■□□ 2.392e-7■■■□□ 17.2
NKRFO15226 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.46■■■□□ 2.312e-7■■■□□ 17.2
NKRFO15226 NEU4-215ENST00000488997 541 ntTSL 425.25■■□□□ 1.638e-7■■■□□ 17.2
NKRFO15226 NEU4-212ENST00000435894 484 ntTSL 424.41■■□□□ 1.58e-7■■■□□ 17.2
NKRFO15226 AGAP3-209ENST00000469901 582 ntTSL 323.13■■□□□ 1.292e-7■■■□□ 17.2
NKRFO15226 AGAP3-221ENST00000490097 604 ntTSL 417.11■□□□□ 0.332e-7■■■□□ 17.2
NKRFO15226 THUMPD3-AS1-220ENST00000524210 2591 ntTSL 517.71■□□□□ 0.431e-14■■■□□ 17.1
NKRFO15226 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.68■□□□□ 0.11e-14■■■□□ 17.1
NKRFO15226 BCAR1-217ENST00000566465 547 ntTSL 417.79■□□□□ 0.447e-7■■■□□ 17.1
NKRFO15226 CCDC85C-203ENST00000554996 619 ntTSL 411.83□□□□□ -0.521e-6■■■□□ 17.1
NKRFO15226 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.89■■□□□ 1.413e-7■■■□□ 17.1
NKRFO15226 BSG-209ENST00000574970 570 ntTSL 425.3■■□□□ 1.644e-7■■■□□ 17.1
NKRFO15226 BSG-208ENST00000573784 559 ntTSL 422.18■■□□□ 1.144e-7■■■□□ 17.1
NKRFO15226 BSG-211ENST00000576984 544 ntTSL 421.31■■□□□ 14e-7■■■□□ 17.1
NKRFO15226 RFFL-209ENST00000581265 596 ntTSL 412.45□□□□□ -0.421e-12■■■□□ 17.1
NKRFO15226 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.853e-7■■■□□ 17.1
NKRFO15226 PKDCC-202ENST00000401498 1550 ntTSL 534.3■■■■□ 3.085e-7■■■□□ 17.1
NKRFO15226 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.915e-7■■■□□ 17.1
NKRFO15226 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.91■■□□□ 1.742e-6■■■□□ 17.1
NKRFO15226 SF1-221ENST00000633899 591 ntTSL 424.03■■□□□ 1.442e-6■■■□□ 17.1
NKRFO15226 SF1-213ENST00000472725 632 ntTSL 322.82■■□□□ 1.242e-6■■■□□ 17.1
NKRFO15226 SF1-212ENST00000463343 983 ntTSL 220.25■□□□□ 0.832e-6■■■□□ 17.1
NKRFO15226 SF1-207ENST00000413951 623 ntTSL 219.55■□□□□ 0.722e-6■■■□□ 17.1
NKRFO15226 SF1-215ENST00000482693 755 ntTSL 219.17■□□□□ 0.662e-6■■■□□ 17.1
NKRFO15226 SF1-208ENST00000432725 475 ntTSL 417.91■□□□□ 0.462e-6■■■□□ 17.1
NKRFO15226 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.681e-6■■■□□ 17
NKRFO15226 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.51e-6■■■□□ 17
NKRFO15226 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.111e-6■■■□□ 17
NKRFO15226 RXRA-201ENST00000356384 5770 ntTSL 516.22■□□□□ 0.191e-6■■■□□ 17
NKRFO15226 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.672e-16■■■□□ 17
NKRFO15226 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.682e-6■■■□□ 17
NKRFO15226 SDF4-205ENST00000465727 2095 ntTSL 221.73■■□□□ 1.072e-6■■■□□ 17
NKRFO15226 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.922e-6■■■□□ 17
NKRFO15226 SDF4-203ENST00000403997 728 ntTSL 315.45■□□□□ 0.062e-6■■■□□ 17
NKRFO15226 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)13.52□□□□□ -0.255e-6■■■□□ 17
NKRFO15226 SAMD4B-204ENST00000596271 578 nt13.87□□□□□ -0.195e-7■■■□□ 17
NKRFO15226 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.65■■□□□ 1.542e-6■■■□□ 17
NKRFO15226 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.341e-6■■■□□ 17
NKRFO15226 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.53■□□□□ 0.241e-6■■■□□ 17
NKRFO15226 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.181e-6■■■□□ 17
NKRFO15226 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.221e-6■■■□□ 17
NKRFO15226 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.38e-7■■■□□ 17
NKRFO15226 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.58■■□□□ 1.372e-7■■■□□ 17
NKRFO15226 AP000662.2-201ENST00000528466 567 ntTSL 419.54■□□□□ 0.722e-7■■■□□ 17
NKRFO15226 SEPT9-212ENST00000586128 752 ntTSL 416.15■□□□□ 0.189e-7■■■□□ 17
NKRFO15226 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.482e-6■■■□□ 17
NKRFO15226 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.33■□□□□ 0.372e-6■■■□□ 17
NKRFO15226 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.162e-6■■■□□ 17
NKRFO15226 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.042e-6■■■□□ 17
NKRFO15226 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.112e-6■■■□□ 17
NKRFO15226 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.282e-6■■■□□ 17
NKRFO15226 IRGQ-204ENST00000601520 495 ntTSL 314.67□□□□□ -0.062e-6■■■□□ 17
NKRFO15226 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.072e-6■■■□□ 17
NKRFO15226 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC12.38□□□□□ -0.437e-8■■■□□ 16.9
NKRFO15226 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC12.81□□□□□ -0.367e-7■■■□□ 16.9
NKRFO15226 MACROD1-207ENST00000543422 403 ntTSL 316.37■□□□□ 0.212e-6■■■□□ 16.9
NKRFO15226 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.141e-6■■■□□ 16.9
NKRFO15226 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.051e-6■■■□□ 16.9
NKRFO15226 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC14.43□□□□□ -0.11e-6■■■□□ 16.9
Retrieved 100 of 9,198 protein–RNA pairs in 106.4 ms