RNA–Protein interactions for RNA: ENST00000551310.1

ATP2B1-209, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-209ENST00000551310 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
ATP2B1-209ENST00000551310 ABCC9O60706 1549 aa35.98■■■■□ 3.35
ATP2B1-209ENST00000551310 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
ATP2B1-209ENST00000551310 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.07
ATP2B1-209ENST00000551310 NACADO15069 1562 aa34.06■■■■□ 3.04
ATP2B1-209ENST00000551310 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
ATP2B1-209ENST00000551310 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
ATP2B1-209ENST00000551310 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
ATP2B1-209ENST00000551310 PABPN1Q86U42 306 aaKnown RBP eCLIP33.56■■■□□ 2.96
ATP2B1-209ENST00000551310 UNC13AQ9UPW8 1703 aa33.38■■■□□ 2.93
ATP2B1-209ENST00000551310 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
ATP2B1-209ENST00000551310 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.92
ATP2B1-209ENST00000551310 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
ATP2B1-209ENST00000551310 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
ATP2B1-209ENST00000551310 SCRIBQ14160 1630 aa32.74■■■□□ 2.83
ATP2B1-209ENST00000551310 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
ATP2B1-209ENST00000551310 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
ATP2B1-209ENST00000551310 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
ATP2B1-209ENST00000551310 NCAPD3P42695 1498 aa31.5■■■□□ 2.63
ATP2B1-209ENST00000551310 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
ATP2B1-209ENST00000551310 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
ATP2B1-209ENST00000551310 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
ATP2B1-209ENST00000551310 HMGXB3Q12766 1538 aa31.2■■■□□ 2.59
ATP2B1-209ENST00000551310 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
ATP2B1-209ENST00000551310 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
ATP2B1-209ENST00000551310 ERCC6Q03468 1493 aa31.08■■■□□ 2.57
ATP2B1-209ENST00000551310 CUX2O14529 1486 aa31.04■■■□□ 2.56
ATP2B1-209ENST00000551310 BAZ1BQ9UIG0 1483 aaKnown RBP31.03■■■□□ 2.56
ATP2B1-209ENST00000551310 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
ATP2B1-209ENST00000551310 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
ATP2B1-209ENST00000551310 NESP48681 1621 aa30.91■■■□□ 2.54
ATP2B1-209ENST00000551310 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
ATP2B1-209ENST00000551310 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
ATP2B1-209ENST00000551310 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
ATP2B1-209ENST00000551310 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
ATP2B1-209ENST00000551310 WIZO95785 1651 aa30.5■■■□□ 2.47
ATP2B1-209ENST00000551310 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
ATP2B1-209ENST00000551310 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
ATP2B1-209ENST00000551310 MRC2Q9UBG0 1479 aa30.28■■■□□ 2.44
ATP2B1-209ENST00000551310 WDR62O43379 1518 aa30.19■■■□□ 2.42
ATP2B1-209ENST00000551310 CFTRP13569 1480 aa30.18■■■□□ 2.42
ATP2B1-209ENST00000551310 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
ATP2B1-209ENST00000551310 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
ATP2B1-209ENST00000551310 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
ATP2B1-209ENST00000551310 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
ATP2B1-209ENST00000551310 CCDC88BA6NC98 1476 aa29.86■■■□□ 2.37
ATP2B1-209ENST00000551310 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
ATP2B1-209ENST00000551310 OSCARQ8IYS5 282 aa29.7■■■□□ 2.35
ATP2B1-209ENST00000551310 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
ATP2B1-209ENST00000551310 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
ATP2B1-209ENST00000551310 TOPBP1Q92547 1522 aa29.56■■■□□ 2.32
ATP2B1-209ENST00000551310 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
ATP2B1-209ENST00000551310 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
ATP2B1-209ENST00000551310 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
ATP2B1-209ENST00000551310 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
ATP2B1-209ENST00000551310 EIF4G3O43432 1585 aaKnown RBP29.28■■■□□ 2.28
ATP2B1-209ENST00000551310 AQRO60306 1485 aaKnown RBP eCLIP29.27■■■□□ 2.28
ATP2B1-209ENST00000551310 POLA1P09884 1462 aaPredicted RBP29.27■■■□□ 2.28
ATP2B1-209ENST00000551310 SOGA1O94964 1423 aa29.18■■■□□ 2.26
ATP2B1-209ENST00000551310 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
ATP2B1-209ENST00000551310 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
ATP2B1-209ENST00000551310 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
ATP2B1-209ENST00000551310 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
ATP2B1-209ENST00000551310 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
ATP2B1-209ENST00000551310 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
ATP2B1-209ENST00000551310 FBLN2P98095 1184 aa29.09■■■□□ 2.25
ATP2B1-209ENST00000551310 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
ATP2B1-209ENST00000551310 CUX1P39880 1505 aa29.05■■■□□ 2.24
ATP2B1-209ENST00000551310 CHD1O14646 1710 aa29.03■■■□□ 2.24
ATP2B1-209ENST00000551310 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
ATP2B1-209ENST00000551310 WDR97A6NE52 1622 aa29■■■□□ 2.23
ATP2B1-209ENST00000551310 CYB5RLQ6IPT4 315 aa28.98■■■□□ 2.23
ATP2B1-209ENST00000551310 SNAPC4Q5SXM2 1469 aa28.93■■■□□ 2.22
ATP2B1-209ENST00000551310 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
ATP2B1-209ENST00000551310 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
ATP2B1-209ENST00000551310 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
ATP2B1-209ENST00000551310 ARAP1Q96P48 1450 aa28.84■■■□□ 2.21
ATP2B1-209ENST00000551310 GAPVD1Q14C86 1478 aa28.8■■■□□ 2.2
ATP2B1-209ENST00000551310 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
ATP2B1-209ENST00000551310 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
ATP2B1-209ENST00000551310 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
ATP2B1-209ENST00000551310 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
ATP2B1-209ENST00000551310 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
ATP2B1-209ENST00000551310 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
ATP2B1-209ENST00000551310 PBRM1Q86U86 1689 aa28.66■■■□□ 2.18
ATP2B1-209ENST00000551310 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
ATP2B1-209ENST00000551310 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
ATP2B1-209ENST00000551310 BIVM-ERCC5R4GMW8 1640 aa28.55■■■□□ 2.16
ATP2B1-209ENST00000551310 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
ATP2B1-209ENST00000551310 FHAD1B1AJZ9 1412 aa28.45■■■□□ 2.15
ATP2B1-209ENST00000551310 NUP160Q12769 1436 aa28.44■■■□□ 2.14
ATP2B1-209ENST00000551310 ADAMTS12P58397 1594 aa28.44■■■□□ 2.14
ATP2B1-209ENST00000551310 ERICH3Q5RHP9 1530 aa28.41■■■□□ 2.14
ATP2B1-209ENST00000551310 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
ATP2B1-209ENST00000551310 ERCC6L2Q5T890 1561 aa28.3■■■□□ 2.12
ATP2B1-209ENST00000551310 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
ATP2B1-209ENST00000551310 JPH4Q96JJ6 628 aa28.21■■■□□ 2.11
ATP2B1-209ENST00000551310 PRG4Q92954 1404 aaPredicted RBP28.16■■■□□ 2.1
ATP2B1-209ENST00000551310 IGF1RP08069 1367 aa28.11■■■□□ 2.09
ATP2B1-209ENST00000551310 KIF27Q86VH2 1401 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms