RNA–Protein interactions for RNA: ENST00000311124.8

SLC19A1-201, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC19A1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-201ENST00000311124 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
SLC19A1-201ENST00000311124 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
SLC19A1-201ENST00000311124 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
SLC19A1-201ENST00000311124 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
SLC19A1-201ENST00000311124 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
SLC19A1-201ENST00000311124 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
SLC19A1-201ENST00000311124 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
SLC19A1-201ENST00000311124 HRCP23327 699 aa23.26■■□□□ 1.31
SLC19A1-201ENST00000311124 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
SLC19A1-201ENST00000311124 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
SLC19A1-201ENST00000311124 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
SLC19A1-201ENST00000311124 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
SLC19A1-201ENST00000311124 MYO15BQ96JP2 1530 aa23.02■■□□□ 1.28
SLC19A1-201ENST00000311124 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
SLC19A1-201ENST00000311124 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
SLC19A1-201ENST00000311124 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.2
SLC19A1-201ENST00000311124 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.2
SLC19A1-201ENST00000311124 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
SLC19A1-201ENST00000311124 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
SLC19A1-201ENST00000311124 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
SLC19A1-201ENST00000311124 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
SLC19A1-201ENST00000311124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
SLC19A1-201ENST00000311124 ABCC9O60706 1549 aa22.04■■□□□ 1.12
SLC19A1-201ENST00000311124 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
SLC19A1-201ENST00000311124 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
SLC19A1-201ENST00000311124 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
SLC19A1-201ENST00000311124 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
SLC19A1-201ENST00000311124 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
SLC19A1-201ENST00000311124 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
SLC19A1-201ENST00000311124 CECR2Q9BXF3 1484 aa21.68■■□□□ 1.06
SLC19A1-201ENST00000311124 APLP2Q06481 763 aa21.68■■□□□ 1.06
SLC19A1-201ENST00000311124 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
SLC19A1-201ENST00000311124 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
SLC19A1-201ENST00000311124 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
SLC19A1-201ENST00000311124 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
SLC19A1-201ENST00000311124 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.04
SLC19A1-201ENST00000311124 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
SLC19A1-201ENST00000311124 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
SLC19A1-201ENST00000311124 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
SLC19A1-201ENST00000311124 ACIN1Q9UKV3 1341 aaKnown RBP21.46■■□□□ 1.03
SLC19A1-201ENST00000311124 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
SLC19A1-201ENST00000311124 WIZO95785 1651 aa21.3■■□□□ 1
SLC19A1-201ENST00000311124 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
SLC19A1-201ENST00000311124 ITGAEP38570 1179 aa21.25■□□□□ 0.99
SLC19A1-201ENST00000311124 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
SLC19A1-201ENST00000311124 NACADO15069 1562 aa21.22■□□□□ 0.99
SLC19A1-201ENST00000311124 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
SLC19A1-201ENST00000311124 SOGA1O94964 1423 aa21.21■□□□□ 0.99
SLC19A1-201ENST00000311124 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
SLC19A1-201ENST00000311124 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
SLC19A1-201ENST00000311124 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
SLC19A1-201ENST00000311124 MIER1Q8N108 512 aa21.06■□□□□ 0.96
SLC19A1-201ENST00000311124 TNIKQ9UKE5 1360 aa21.02■□□□□ 0.96
SLC19A1-201ENST00000311124 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
SLC19A1-201ENST00000311124 CLIP1P30622 1438 aa20.92■□□□□ 0.94
SLC19A1-201ENST00000311124 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
SLC19A1-201ENST00000311124 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
SLC19A1-201ENST00000311124 EEA1Q15075 1411 aa20.83■□□□□ 0.93
SLC19A1-201ENST00000311124 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
SLC19A1-201ENST00000311124 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
SLC19A1-201ENST00000311124 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
SLC19A1-201ENST00000311124 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
SLC19A1-201ENST00000311124 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
SLC19A1-201ENST00000311124 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
SLC19A1-201ENST00000311124 BCANQ96GW7 911 aa20.7■□□□□ 0.9
SLC19A1-201ENST00000311124 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
SLC19A1-201ENST00000311124 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
SLC19A1-201ENST00000311124 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
SLC19A1-201ENST00000311124 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.88
SLC19A1-201ENST00000311124 MYT1Q01538 1121 aa20.57■□□□□ 0.88
SLC19A1-201ENST00000311124 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
SLC19A1-201ENST00000311124 NEFLP07196 543 aa20.52■□□□□ 0.87
SLC19A1-201ENST00000311124 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SLC19A1-201ENST00000311124 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
SLC19A1-201ENST00000311124 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
SLC19A1-201ENST00000311124 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
SLC19A1-201ENST00000311124 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
SLC19A1-201ENST00000311124 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
SLC19A1-201ENST00000311124 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
SLC19A1-201ENST00000311124 FKBP8Q14318 412 aa20.36■□□□□ 0.85
SLC19A1-201ENST00000311124 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
SLC19A1-201ENST00000311124 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
SLC19A1-201ENST00000311124 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
SLC19A1-201ENST00000311124 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
SLC19A1-201ENST00000311124 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
SLC19A1-201ENST00000311124 ANP32CO43423 234 aa20.29■□□□□ 0.84
SLC19A1-201ENST00000311124 KIF21BO75037 1637 aa20.27■□□□□ 0.84
SLC19A1-201ENST00000311124 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
SLC19A1-201ENST00000311124 ARID3CA6NKF2 412 aa20.27■□□□□ 0.83
SLC19A1-201ENST00000311124 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
SLC19A1-201ENST00000311124 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
SLC19A1-201ENST00000311124 ERICH6Q7L0X2 663 aa20.16■□□□□ 0.82
SLC19A1-201ENST00000311124 CUX2O14529 1486 aa20.15■□□□□ 0.82
SLC19A1-201ENST00000311124 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
SLC19A1-201ENST00000311124 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
SLC19A1-201ENST00000311124 ARAP1Q96P48 1450 aa20.12■□□□□ 0.81
SLC19A1-201ENST00000311124 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
SLC19A1-201ENST00000311124 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
SLC19A1-201ENST00000311124 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
SLC19A1-201ENST00000311124 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms