RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 AEBP2Q6ZN18 517 aaPredicted RBP10.21□□□□□ -0.77
ZEB1-212ENST00000558655 CHIC1Q5VXU3 224 aa9.8□□□□□ -0.84
ZEB1-212ENST00000558655 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
ZEB1-212ENST00000558655 NISCHQ9Y2I1 1504 aa9.61□□□□□ -0.87
ZEB1-212ENST00000558655 DNAJC5BQ9UF47 199 aa9.14□□□□□ -0.95
ZEB1-212ENST00000558655 ABCC9O60706 1549 aa8.92□□□□□ -0.98
ZEB1-212ENST00000558655 PHF23Q9BUL5 403 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-212ENST00000558655 CUX2O14529 1486 aa8.76□□□□□ -1.01
ZEB1-212ENST00000558655 CCDC180Q9P1Z9 1646 aa8.67□□□□□ -1.02
ZEB1-212ENST00000558655 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
ZEB1-212ENST00000558655 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
ZEB1-212ENST00000558655 SENP3Q9H4L4 574 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-212ENST00000558655 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
ZEB1-212ENST00000558655 NACADO15069 1562 aa8.34□□□□□ -1.07
ZEB1-212ENST00000558655 CC2D2AQ9P2K1 1620 aa8.28□□□□□ -1.08
ZEB1-212ENST00000558655 TRIM41Q8WV44 630 aa8.23□□□□□ -1.09
ZEB1-212ENST00000558655 UNC13AQ9UPW8 1703 aa8.19□□□□□ -1.1
ZEB1-212ENST00000558655 PABPN1Q86U42 306 aaKnown RBP eCLIP8.17□□□□□ -1.1
ZEB1-212ENST00000558655 BICRAQ9NZM4 1560 aa8.16□□□□□ -1.1
ZEB1-212ENST00000558655 ILDR1Q86SU0 546 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-212ENST00000558655 MYO15BQ96JP2 1530 aa8.13□□□□□ -1.11
ZEB1-212ENST00000558655 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
ZEB1-212ENST00000558655 DCAF1Q9Y4B6 1507 aa8.06□□□□□ -1.12
ZEB1-212ENST00000558655 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
ZEB1-212ENST00000558655 ERCC6L2Q5T890 1561 aa8□□□□□ -1.13
ZEB1-212ENST00000558655 FOXD1Q16676 465 aa7.99□□□□□ -1.13
ZEB1-212ENST00000558655 ERCC6Q03468 1493 aa7.95□□□□□ -1.14
ZEB1-212ENST00000558655 SOCS7O14512 581 aa7.93□□□□□ -1.14
ZEB1-212ENST00000558655 SLC24A1O60721 1099 aa7.92□□□□□ -1.14
ZEB1-212ENST00000558655 THOC2Q8NI27 1593 aaKnown RBP7.9□□□□□ -1.14
ZEB1-212ENST00000558655 PLPPR3Q6T4P5 718 aa7.89□□□□□ -1.15
ZEB1-212ENST00000558655 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
ZEB1-212ENST00000558655 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
ZEB1-212ENST00000558655 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
ZEB1-212ENST00000558655 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-212ENST00000558655 FBXO41Q8TF61 875 aa7.82□□□□□ -1.16
ZEB1-212ENST00000558655 LMTK3Q96Q04 1460 aa7.82□□□□□ -1.16
ZEB1-212ENST00000558655 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
ZEB1-212ENST00000558655 OSCARQ8IYS5 282 aa7.76□□□□□ -1.17
ZEB1-212ENST00000558655 ADRA2BP18089 450 aa7.74□□□□□ -1.17
ZEB1-212ENST00000558655 ARHGEF11O15085 1522 aa7.7□□□□□ -1.18
ZEB1-212ENST00000558655 SCRIBQ14160 1630 aa7.69□□□□□ -1.18
ZEB1-212ENST00000558655 POTEDQ86YR6 584 aa7.68□□□□□ -1.18
ZEB1-212ENST00000558655 LAMC3Q9Y6N6 1575 aa7.67□□□□□ -1.18
ZEB1-212ENST00000558655 DCAF8L2P0C7V8 631 aa7.66□□□□□ -1.18
ZEB1-212ENST00000558655 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
ZEB1-212ENST00000558655 WDR62O43379 1518 aa7.61□□□□□ -1.19
ZEB1-212ENST00000558655 NCAPD3P42695 1498 aa7.58□□□□□ -1.2
ZEB1-212ENST00000558655 TRHP20396 242 aaPredicted RBP7.57□□□□□ -1.2
ZEB1-212ENST00000558655 HMGXB3Q12766 1538 aa7.54□□□□□ -1.2
ZEB1-212ENST00000558655 PDS5BQ9NTI5 1447 aa7.53□□□□□ -1.2
ZEB1-212ENST00000558655 SPATA31D1Q6ZQQ2 1576 aa7.51□□□□□ -1.21
ZEB1-212ENST00000558655 ARAP1Q96P48 1450 aa7.51□□□□□ -1.21
ZEB1-212ENST00000558655 MRC2Q9UBG0 1479 aa7.51□□□□□ -1.21
ZEB1-212ENST00000558655 HECW2Q9P2P5 1572 aa7.49□□□□□ -1.21
ZEB1-212ENST00000558655 PIAS4Q8N2W9 510 aaPredicted RBP7.48□□□□□ -1.21
ZEB1-212ENST00000558655 KIF21AQ7Z4S6 1674 aa7.45□□□□□ -1.22
ZEB1-212ENST00000558655 SMARCA4P51532 1647 aa7.44□□□□□ -1.22
ZEB1-212ENST00000558655 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
ZEB1-212ENST00000558655 SMARCA2P51531 1590 aa7.42□□□□□ -1.22
ZEB1-212ENST00000558655 DISP3Q9P2K9 1392 aa7.39□□□□□ -1.23
ZEB1-212ENST00000558655 ILDR2Q71H61 639 aa7.38□□□□□ -1.23
ZEB1-212ENST00000558655 KDM6BO15054 1643 aa7.38□□□□□ -1.23
ZEB1-212ENST00000558655 MROH2BQ7Z745 1585 aa7.37□□□□□ -1.23
ZEB1-212ENST00000558655 EHMT2Q96KQ7 1210 aa7.37□□□□□ -1.23
ZEB1-212ENST00000558655 KDM4FA0A1W2PPD8 638 aa7.34□□□□□ -1.23
ZEB1-212ENST00000558655 TOP2BQ02880 1626 aa7.33□□□□□ -1.24
ZEB1-212ENST00000558655 NESP48681 1621 aa7.32□□□□□ -1.24
ZEB1-212ENST00000558655 WIZO95785 1651 aa7.32□□□□□ -1.24
ZEB1-212ENST00000558655 ATAD2BQ9ULI0 1458 aa7.32□□□□□ -1.24
ZEB1-212ENST00000558655 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
ZEB1-212ENST00000558655 SYNJ2O15056 1496 aa7.31□□□□□ -1.24
ZEB1-212ENST00000558655 TOP2AP11388 1531 aaKnown RBP7.29□□□□□ -1.24
ZEB1-212ENST00000558655 KIF13AQ9H1H9 1805 aa7.28□□□□□ -1.24
ZEB1-212ENST00000558655 IQSEC2Q5JU85 1478 aa7.28□□□□□ -1.24
ZEB1-212ENST00000558655 WDR97A6NE52 1622 aa7.26□□□□□ -1.25
ZEB1-212ENST00000558655 CLASP1Q7Z460 1538 aa7.26□□□□□ -1.25
ZEB1-212ENST00000558655 BAZ1BQ9UIG0 1483 aaKnown RBP7.24□□□□□ -1.25
ZEB1-212ENST00000558655 ADGRL1O94910 1474 aa7.22□□□□□ -1.25
ZEB1-212ENST00000558655 IFT140Q96RY7 1462 aa7.21□□□□□ -1.26
ZEB1-212ENST00000558655 PRDM2Q13029 1718 aa7.2□□□□□ -1.26
ZEB1-212ENST00000558655 CHD1O14646 1710 aa7.19□□□□□ -1.26
ZEB1-212ENST00000558655 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
ZEB1-212ENST00000558655 MSH5O43196 834 aa7.18□□□□□ -1.26
ZEB1-212ENST00000558655 SYNJ1O43426 1573 aa7.17□□□□□ -1.26
ZEB1-212ENST00000558655 DAXXQ9UER7 740 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-212ENST00000558655 RTN4Q9NQC3 1192 aaKnown RBP7.15□□□□□ -1.26
ZEB1-212ENST00000558655 CCDC88BA6NC98 1476 aa7.14□□□□□ -1.27
ZEB1-212ENST00000558655 CADPSQ9ULU8 1353 aa7.13□□□□□ -1.27
ZEB1-212ENST00000558655 MAPKBP1O60336 1514 aa7.12□□□□□ -1.27
ZEB1-212ENST00000558655 ABCC10Q5T3U5 1492 aa7.11□□□□□ -1.27
ZEB1-212ENST00000558655 CFTRP13569 1480 aa7.09□□□□□ -1.27
ZEB1-212ENST00000558655 SUPT5HO00267 1087 aaKnown RBP7.08□□□□□ -1.28
ZEB1-212ENST00000558655 MAPK8IP2Q13387 824 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-212ENST00000558655 CERKQ8TCT0 537 aa7.08□□□□□ -1.28
ZEB1-212ENST00000558655 ABCC8Q09428 1581 aa7.06□□□□□ -1.28
ZEB1-212ENST00000558655 GAPVD1Q14C86 1478 aa7.06□□□□□ -1.28
ZEB1-212ENST00000558655 EIF4G3O43432 1585 aaKnown RBP7.05□□□□□ -1.28
ZEB1-212ENST00000558655 DIP2BQ9P265 1576 aa7.05□□□□□ -1.28
ZEB1-212ENST00000558655 IFFO2Q5TF58 517 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms