RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
CCDC85C-203ENST00000554996 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
CCDC85C-203ENST00000554996 ABCC9O60706 1549 aa22.62■■□□□ 1.21
CCDC85C-203ENST00000554996 RB1CC1Q8TDY2 1594 aa21.62■■□□□ 1.05
CCDC85C-203ENST00000554996 NACADO15069 1562 aa21.53■■□□□ 1.04
CCDC85C-203ENST00000554996 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
CCDC85C-203ENST00000554996 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
CCDC85C-203ENST00000554996 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
CCDC85C-203ENST00000554996 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
CCDC85C-203ENST00000554996 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
CCDC85C-203ENST00000554996 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
CCDC85C-203ENST00000554996 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
CCDC85C-203ENST00000554996 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
CCDC85C-203ENST00000554996 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
CCDC85C-203ENST00000554996 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
CCDC85C-203ENST00000554996 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
CCDC85C-203ENST00000554996 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
CCDC85C-203ENST00000554996 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
CCDC85C-203ENST00000554996 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
CCDC85C-203ENST00000554996 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
CCDC85C-203ENST00000554996 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
CCDC85C-203ENST00000554996 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
CCDC85C-203ENST00000554996 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
CCDC85C-203ENST00000554996 HMGXB3Q12766 1538 aa19.8■□□□□ 0.76
CCDC85C-203ENST00000554996 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
CCDC85C-203ENST00000554996 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
CCDC85C-203ENST00000554996 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
CCDC85C-203ENST00000554996 WIZO95785 1651 aa19.62■□□□□ 0.73
CCDC85C-203ENST00000554996 NESP48681 1621 aa19.56■□□□□ 0.72
CCDC85C-203ENST00000554996 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
CCDC85C-203ENST00000554996 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
CCDC85C-203ENST00000554996 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
CCDC85C-203ENST00000554996 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
CCDC85C-203ENST00000554996 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
CCDC85C-203ENST00000554996 CUX2O14529 1486 aa19.33■□□□□ 0.68
CCDC85C-203ENST00000554996 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
CCDC85C-203ENST00000554996 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
CCDC85C-203ENST00000554996 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
CCDC85C-203ENST00000554996 PRDM2Q13029 1718 aa19.12■□□□□ 0.65
CCDC85C-203ENST00000554996 CFTRP13569 1480 aa19.12■□□□□ 0.65
CCDC85C-203ENST00000554996 WDR62O43379 1518 aa19.1■□□□□ 0.65
CCDC85C-203ENST00000554996 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
CCDC85C-203ENST00000554996 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
CCDC85C-203ENST00000554996 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
CCDC85C-203ENST00000554996 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
CCDC85C-203ENST00000554996 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
CCDC85C-203ENST00000554996 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
CCDC85C-203ENST00000554996 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
CCDC85C-203ENST00000554996 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
CCDC85C-203ENST00000554996 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
CCDC85C-203ENST00000554996 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
CCDC85C-203ENST00000554996 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
CCDC85C-203ENST00000554996 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
CCDC85C-203ENST00000554996 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
CCDC85C-203ENST00000554996 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
CCDC85C-203ENST00000554996 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
CCDC85C-203ENST00000554996 CUX1P39880 1505 aa18.59■□□□□ 0.57
CCDC85C-203ENST00000554996 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
CCDC85C-203ENST00000554996 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
CCDC85C-203ENST00000554996 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.55
CCDC85C-203ENST00000554996 CHD1O14646 1710 aa18.49■□□□□ 0.55
CCDC85C-203ENST00000554996 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.557e-6■■□□□ 13.1
CCDC85C-203ENST00000554996 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CCDC85C-203ENST00000554996 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
CCDC85C-203ENST00000554996 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
CCDC85C-203ENST00000554996 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
CCDC85C-203ENST00000554996 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
CCDC85C-203ENST00000554996 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
CCDC85C-203ENST00000554996 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
CCDC85C-203ENST00000554996 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
CCDC85C-203ENST00000554996 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
CCDC85C-203ENST00000554996 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
CCDC85C-203ENST00000554996 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
CCDC85C-203ENST00000554996 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.53
CCDC85C-203ENST00000554996 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
CCDC85C-203ENST00000554996 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.529e-6■■■■■ 50.1
CCDC85C-203ENST00000554996 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
CCDC85C-203ENST00000554996 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
CCDC85C-203ENST00000554996 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
CCDC85C-203ENST00000554996 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
CCDC85C-203ENST00000554996 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
CCDC85C-203ENST00000554996 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
CCDC85C-203ENST00000554996 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
CCDC85C-203ENST00000554996 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
CCDC85C-203ENST00000554996 FBLN2P98095 1184 aa18.17■□□□□ 0.5
CCDC85C-203ENST00000554996 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
CCDC85C-203ENST00000554996 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
CCDC85C-203ENST00000554996 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
CCDC85C-203ENST00000554996 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
CCDC85C-203ENST00000554996 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
CCDC85C-203ENST00000554996 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
CCDC85C-203ENST00000554996 NUP160Q12769 1436 aa18■□□□□ 0.47
CCDC85C-203ENST00000554996 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
CCDC85C-203ENST00000554996 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
CCDC85C-203ENST00000554996 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
CCDC85C-203ENST00000554996 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
CCDC85C-203ENST00000554996 CUL7Q14999 1698 aa17.9■□□□□ 0.46
CCDC85C-203ENST00000554996 IGF1RP08069 1367 aa17.85■□□□□ 0.45
CCDC85C-203ENST00000554996 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
CCDC85C-203ENST00000554996 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms