RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
SF1-208ENST00000432725 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
SF1-208ENST00000432725 ABCC9O60706 1549 aa33.69■■■□□ 2.98
SF1-208ENST00000432725 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
SF1-208ENST00000432725 NACADO15069 1562 aa32.12■■■□□ 2.73
SF1-208ENST00000432725 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
SF1-208ENST00000432725 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
SF1-208ENST00000432725 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
SF1-208ENST00000432725 DCAF1Q9Y4B6 1507 aa31.55■■■□□ 2.64
SF1-208ENST00000432725 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
SF1-208ENST00000432725 UNC13AQ9UPW8 1703 aa31.4■■■□□ 2.62
SF1-208ENST00000432725 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
SF1-208ENST00000432725 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
SF1-208ENST00000432725 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SF1-208ENST00000432725 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
SF1-208ENST00000432725 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
SF1-208ENST00000432725 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
SF1-208ENST00000432725 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
SF1-208ENST00000432725 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
SF1-208ENST00000432725 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
SF1-208ENST00000432725 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
SF1-208ENST00000432725 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
SF1-208ENST00000432725 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
SF1-208ENST00000432725 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
SF1-208ENST00000432725 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.29
SF1-208ENST00000432725 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
SF1-208ENST00000432725 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
SF1-208ENST00000432725 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
SF1-208ENST00000432725 NESP48681 1621 aa29.04■■■□□ 2.24
SF1-208ENST00000432725 WIZO95785 1651 aa28.97■■■□□ 2.23
SF1-208ENST00000432725 CUX2O14529 1486 aa28.95■■■□□ 2.22
SF1-208ENST00000432725 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
SF1-208ENST00000432725 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
SF1-208ENST00000432725 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
SF1-208ENST00000432725 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
SF1-208ENST00000432725 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
SF1-208ENST00000432725 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
SF1-208ENST00000432725 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
SF1-208ENST00000432725 DNAJC5Q9H3Z4 198 aa28.57■■■□□ 2.16
SF1-208ENST00000432725 CFTRP13569 1480 aa28.53■■■□□ 2.16
SF1-208ENST00000432725 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
SF1-208ENST00000432725 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
SF1-208ENST00000432725 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
SF1-208ENST00000432725 WDR62O43379 1518 aa28.39■■■□□ 2.14
SF1-208ENST00000432725 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
SF1-208ENST00000432725 URB2Q14146 1524 aaKnown RBP28.17■■■□□ 2.1
SF1-208ENST00000432725 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
SF1-208ENST00000432725 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
SF1-208ENST00000432725 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
SF1-208ENST00000432725 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
SF1-208ENST00000432725 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
SF1-208ENST00000432725 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
SF1-208ENST00000432725 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
SF1-208ENST00000432725 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
SF1-208ENST00000432725 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
SF1-208ENST00000432725 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.02
SF1-208ENST00000432725 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
SF1-208ENST00000432725 SOGA1O94964 1423 aa27.56■■■□□ 2
SF1-208ENST00000432725 AQRO60306 1485 aaKnown RBP eCLIP27.56■■■□□ 21e-9■□□□□ 10.6
SF1-208ENST00000432725 CUX1P39880 1505 aa27.56■■■□□ 2
SF1-208ENST00000432725 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
SF1-208ENST00000432725 FGD5Q6ZNL6 1462 aa27.53■■■□□ 2
SF1-208ENST00000432725 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
SF1-208ENST00000432725 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
SF1-208ENST00000432725 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
SF1-208ENST00000432725 GRIN2BQ13224 1484 aa27.28■■□□□ 1.96
SF1-208ENST00000432725 FBLN2P98095 1184 aa27.28■■□□□ 1.96
SF1-208ENST00000432725 CHD1O14646 1710 aa27.27■■□□□ 1.96
SF1-208ENST00000432725 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
SF1-208ENST00000432725 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.96
SF1-208ENST00000432725 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
SF1-208ENST00000432725 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
SF1-208ENST00000432725 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
SF1-208ENST00000432725 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
SF1-208ENST00000432725 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
SF1-208ENST00000432725 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
SF1-208ENST00000432725 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
SF1-208ENST00000432725 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
SF1-208ENST00000432725 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
SF1-208ENST00000432725 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
SF1-208ENST00000432725 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
SF1-208ENST00000432725 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
SF1-208ENST00000432725 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
SF1-208ENST00000432725 PBRM1Q86U86 1689 aa27.1■■□□□ 1.93
SF1-208ENST00000432725 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
SF1-208ENST00000432725 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
SF1-208ENST00000432725 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
SF1-208ENST00000432725 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
SF1-208ENST00000432725 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
SF1-208ENST00000432725 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
SF1-208ENST00000432725 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
SF1-208ENST00000432725 NUP160Q12769 1436 aa26.84■■□□□ 1.89
SF1-208ENST00000432725 CEP170Q5SW79 1584 aa26.79■■□□□ 1.88
SF1-208ENST00000432725 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
SF1-208ENST00000432725 IGF1RP08069 1367 aa26.69■■□□□ 1.86
SF1-208ENST00000432725 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
SF1-208ENST00000432725 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
SF1-208ENST00000432725 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
SF1-208ENST00000432725 TRHP20396 242 aaPredicted RBP26.56■■□□□ 1.84
SF1-208ENST00000432725 CUL7Q14999 1698 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms