RNA–Protein interactions for RNA: ENST00000380010.8

SLC19A1-202, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC19A1, Length 1,884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-202ENST00000380010 NISCHQ9Y2I1 1504 aa53.15■■■■■ 6.1
SLC19A1-202ENST00000380010 CCDC180Q9P1Z9 1646 aa46.38■■■■■ 5.02
SLC19A1-202ENST00000380010 ZCCHC6Q5VYS8 1495 aaKnown RBP44.58■■■■■ 4.73
SLC19A1-202ENST00000380010 ABCC9O60706 1549 aa44.32■■■■■ 4.69
SLC19A1-202ENST00000380010 DCAF8L2P0C7V8 631 aa44.1■■■■■ 4.65
SLC19A1-202ENST00000380010 DCAF1Q9Y4B6 1507 aa43.84■■■■■ 4.61
SLC19A1-202ENST00000380010 MYO15BQ96JP2 1530 aa43.4■■■■■ 4.54
SLC19A1-202ENST00000380010 SHROOM4Q9ULL8 1493 aa43.31■■■■■ 4.52
SLC19A1-202ENST00000380010 NACADO15069 1562 aa43.28■■■■■ 4.52
SLC19A1-202ENST00000380010 RB1CC1Q8TDY2 1594 aa43■■■■■ 4.47
SLC19A1-202ENST00000380010 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
SLC19A1-202ENST00000380010 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
SLC19A1-202ENST00000380010 BICRAQ9NZM4 1560 aa41.82■■■■■ 4.29
SLC19A1-202ENST00000380010 PABPN1Q86U42 306 aaKnown RBP eCLIP41.79■■■■■ 4.28
SLC19A1-202ENST00000380010 SUPT5HO00267 1087 aaKnown RBP41.47■■■■■ 4.23
SLC19A1-202ENST00000380010 CECR2Q9BXF3 1484 aa41.43■■■■■ 4.22
SLC19A1-202ENST00000380010 RSF1Q96T23 1441 aaPredicted RBP41.15■■■■■ 4.18
SLC19A1-202ENST00000380010 MROH2BQ7Z745 1585 aa41.12■■■■■ 4.17
SLC19A1-202ENST00000380010 BAZ1AQ9NRL2 1556 aaPredicted RBP41.01■■■■■ 4.16
SLC19A1-202ENST00000380010 SMARCA4P51532 1647 aa40.92■■■■■ 4.14
SLC19A1-202ENST00000380010 WIZO95785 1651 aa40.76■■■■■ 4.12
SLC19A1-202ENST00000380010 EIF4G1Q04637 1599 aaKnown RBP40.55■■■■■ 4.08
SLC19A1-202ENST00000380010 PEG3Q9GZU2 1588 aa40.37■■■■■ 4.05
SLC19A1-202ENST00000380010 ATAD2BQ9ULI0 1458 aa40.34■■■■■ 4.05
SLC19A1-202ENST00000380010 TOP2AP11388 1531 aaKnown RBP40.26■■■■■ 4.04
SLC19A1-202ENST00000380010 SMARCA2P51531 1590 aa40.23■■■■■ 4.03
SLC19A1-202ENST00000380010 BAZ1BQ9UIG0 1483 aaKnown RBP40.07■■■■■ 4.01
SLC19A1-202ENST00000380010 CC2D2AQ9P2K1 1620 aa40.04■■■■■ 4
SLC19A1-202ENST00000380010 NCAPD3P42695 1498 aa39.99■■■■□ 3.99
SLC19A1-202ENST00000380010 CCDC88BA6NC98 1476 aa39.9■■■■□ 3.98
SLC19A1-202ENST00000380010 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
SLC19A1-202ENST00000380010 CHIC1Q5VXU3 224 aa39.51■■■■□ 3.92
SLC19A1-202ENST00000380010 DNAJC5BQ9UF47 199 aa39.45■■■■□ 3.91
SLC19A1-202ENST00000380010 CFTRP13569 1480 aa39.04■■■■□ 3.84
SLC19A1-202ENST00000380010 ABCC8Q09428 1581 aa39.01■■■■□ 3.84
SLC19A1-202ENST00000380010 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
SLC19A1-202ENST00000380010 TRIM41Q8WV44 630 aa38.93■■■■□ 3.82
SLC19A1-202ENST00000380010 NESP48681 1621 aa38.85■■■■□ 3.81
SLC19A1-202ENST00000380010 PRDM2Q13029 1718 aa38.74■■■■□ 3.79
SLC19A1-202ENST00000380010 WRNQ14191 1432 aaPredicted RBP eCLIP38.71■■■■□ 3.79
SLC19A1-202ENST00000380010 LAMC3Q9Y6N6 1575 aa38.65■■■■□ 3.78
SLC19A1-202ENST00000380010 SYNJ1O43426 1573 aa38.62■■■■□ 3.77
SLC19A1-202ENST00000380010 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.76
SLC19A1-202ENST00000380010 CUX1P39880 1505 aa38.45■■■■□ 3.75
SLC19A1-202ENST00000380010 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
SLC19A1-202ENST00000380010 PDS5BQ9NTI5 1447 aa38.37■■■■□ 3.73
SLC19A1-202ENST00000380010 BIVM-ERCC5R4GMW8 1640 aa38.36■■■■□ 3.73
SLC19A1-202ENST00000380010 FAM9AQ8IZU1 332 aaPredicted RBP38.34■■■■□ 3.73
SLC19A1-202ENST00000380010 CEP164Q9UPV0 1460 aa38.32■■■■□ 3.73
SLC19A1-202ENST00000380010 KIF21AQ7Z4S6 1674 aa38.29■■■■□ 3.72
SLC19A1-202ENST00000380010 SOGA1O94964 1423 aa38.22■■■■□ 3.71
SLC19A1-202ENST00000380010 URB2Q14146 1524 aaKnown RBP38.14■■■■□ 3.7
SLC19A1-202ENST00000380010 RUSC2Q8N2Y8 1516 aa38.14■■■■□ 3.7
SLC19A1-202ENST00000380010 DNMBPQ6XZF7 1577 aa38.13■■■■□ 3.69
SLC19A1-202ENST00000380010 TOPBP1Q92547 1522 aa38.11■■■■□ 3.69
SLC19A1-202ENST00000380010 LOC105371045A0A1W2PR82 267 aa38.07■■■■□ 3.68
SLC19A1-202ENST00000380010 FGD5Q6ZNL6 1462 aa38.06■■■■□ 3.68
SLC19A1-202ENST00000380010 ERCC6Q03468 1493 aa37.95■■■■□ 3.67
SLC19A1-202ENST00000380010 MRC2Q9UBG0 1479 aa37.94■■■■□ 3.66
SLC19A1-202ENST00000380010 POLA1P09884 1462 aaPredicted RBP37.92■■■■□ 3.66
SLC19A1-202ENST00000380010 EHMT2Q96KQ7 1210 aa37.89■■■■□ 3.66
SLC19A1-202ENST00000380010 EEA1Q15075 1411 aa37.89■■■■□ 3.66
SLC19A1-202ENST00000380010 RAD54L2Q9Y4B4 1467 aa37.85■■■■□ 3.65
SLC19A1-202ENST00000380010 CSRNP3Q8WYN3 585 aa37.83■■■■□ 3.65
SLC19A1-202ENST00000380010 CUX2O14529 1486 aa37.76■■■■□ 3.64
SLC19A1-202ENST00000380010 WDR62O43379 1518 aa37.75■■■■□ 3.63
SLC19A1-202ENST00000380010 THOC2Q8NI27 1593 aaKnown RBP37.73■■■■□ 3.63
SLC19A1-202ENST00000380010 KIF27Q86VH2 1401 aa37.72■■■■□ 3.63
SLC19A1-202ENST00000380010 ABCA10Q8WWZ4 1543 aa37.67■■■■□ 3.62
SLC19A1-202ENST00000380010 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
SLC19A1-202ENST00000380010 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
SLC19A1-202ENST00000380010 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
SLC19A1-202ENST00000380010 IGF1RP08069 1367 aa37.49■■■■□ 3.59
SLC19A1-202ENST00000380010 KIF21BO75037 1637 aa37.48■■■■□ 3.59
SLC19A1-202ENST00000380010 GOLGA3Q08378 1498 aa37.44■■■■□ 3.58
SLC19A1-202ENST00000380010 PRXQ9BXM0 1461 aa37.43■■■■□ 3.58
SLC19A1-202ENST00000380010 RAPGEF2Q9Y4G8 1499 aa37.43■■■■□ 3.58
SLC19A1-202ENST00000380010 IFT140Q96RY7 1462 aa37.4■■■■□ 3.58
SLC19A1-202ENST00000380010 ABCA5Q8WWZ7 1642 aa37.4■■■■□ 3.58
SLC19A1-202ENST00000380010 GAPVD1Q14C86 1478 aa37.35■■■■□ 3.57
SLC19A1-202ENST00000380010 UBTFP17480 764 aaKnown RBP37.34■■■■□ 3.57
SLC19A1-202ENST00000380010 ZNF608Q9ULD9 1512 aaPredicted RBP37.34■■■■□ 3.57
SLC19A1-202ENST00000380010 AQRO60306 1485 aaKnown RBP eCLIP37.32■■■■□ 3.568e-9■■■■■ 38.8
SLC19A1-202ENST00000380010 CARMIL1Q5VZK9 1371 aa37.27■■■■□ 3.56
SLC19A1-202ENST00000380010 ERICH3Q5RHP9 1530 aa37.26■■■■□ 3.56
SLC19A1-202ENST00000380010 TNIKQ9UKE5 1360 aa37.26■■■■□ 3.56
SLC19A1-202ENST00000380010 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
SLC19A1-202ENST00000380010 EIF4G3O43432 1585 aaKnown RBP37.13■■■■□ 3.53
SLC19A1-202ENST00000380010 CUL7Q14999 1698 aa37.12■■■■□ 3.53
SLC19A1-202ENST00000380010 CEP162Q5TB80 1403 aa37.09■■■■□ 3.53
SLC19A1-202ENST00000380010 GRIN2BQ13224 1484 aa37.08■■■■□ 3.53
SLC19A1-202ENST00000380010 RANGAP1P46060 587 aaPredicted RBP36.96■■■■□ 3.51
SLC19A1-202ENST00000380010 ADAMTS12P58397 1594 aa36.94■■■■□ 3.5
SLC19A1-202ENST00000380010 SNAPC4Q5SXM2 1469 aa36.93■■■■□ 3.5
SLC19A1-202ENST00000380010 FHAD1B1AJZ9 1412 aa36.91■■■■□ 3.5
SLC19A1-202ENST00000380010 CLIP1P30622 1438 aa36.86■■■■□ 3.49
SLC19A1-202ENST00000380010 MAGI1Q96QZ7 1491 aaPredicted RBP36.77■■■■□ 3.48
SLC19A1-202ENST00000380010 CTTNBP2Q8WZ74 1663 aa36.69■■■■□ 3.46
SLC19A1-202ENST00000380010 SYNJ2O15056 1496 aa36.66■■■■□ 3.46
SLC19A1-202ENST00000380010 GRIN2AQ12879 1464 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms