RNA–Protein interactions for RNA: ENST00000557576.5

CCDC85C-206, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2

Gene CCDC85C, Length 656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-206ENST00000557576 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
CCDC85C-206ENST00000557576 ABCC9O60706 1549 aa35.62■■■■□ 3.29
CCDC85C-206ENST00000557576 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
CCDC85C-206ENST00000557576 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
CCDC85C-206ENST00000557576 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
CCDC85C-206ENST00000557576 DCAF8L2P0C7V8 631 aa33.2■■■□□ 2.91
CCDC85C-206ENST00000557576 PABPN1Q86U42 306 aaKnown RBP eCLIP33.15■■■□□ 2.9
CCDC85C-206ENST00000557576 NACADO15069 1562 aa33.09■■■□□ 2.89
CCDC85C-206ENST00000557576 UNC13AQ9UPW8 1703 aa32.81■■■□□ 2.84
CCDC85C-206ENST00000557576 MYO15BQ96JP2 1530 aa32.73■■■□□ 2.83
CCDC85C-206ENST00000557576 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CCDC85C-206ENST00000557576 BICRAQ9NZM4 1560 aa32.57■■■□□ 2.8
CCDC85C-206ENST00000557576 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
CCDC85C-206ENST00000557576 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
CCDC85C-206ENST00000557576 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
CCDC85C-206ENST00000557576 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
CCDC85C-206ENST00000557576 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
CCDC85C-206ENST00000557576 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
CCDC85C-206ENST00000557576 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
CCDC85C-206ENST00000557576 ERCC6Q03468 1493 aa30.76■■■□□ 2.52
CCDC85C-206ENST00000557576 CUX2O14529 1486 aa30.72■■■□□ 2.51
CCDC85C-206ENST00000557576 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
CCDC85C-206ENST00000557576 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
CCDC85C-206ENST00000557576 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
CCDC85C-206ENST00000557576 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
CCDC85C-206ENST00000557576 NESP48681 1621 aa30.44■■■□□ 2.46
CCDC85C-206ENST00000557576 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
CCDC85C-206ENST00000557576 HMGXB3Q12766 1538 aa30.27■■■□□ 2.44
CCDC85C-206ENST00000557576 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
CCDC85C-206ENST00000557576 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
CCDC85C-206ENST00000557576 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
CCDC85C-206ENST00000557576 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
CCDC85C-206ENST00000557576 TRIM41Q8WV44 630 aa30.04■■■□□ 2.4
CCDC85C-206ENST00000557576 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
CCDC85C-206ENST00000557576 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
CCDC85C-206ENST00000557576 WIZO95785 1651 aa29.89■■■□□ 2.38
CCDC85C-206ENST00000557576 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
CCDC85C-206ENST00000557576 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
CCDC85C-206ENST00000557576 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
CCDC85C-206ENST00000557576 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
CCDC85C-206ENST00000557576 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
CCDC85C-206ENST00000557576 WDR62O43379 1518 aa29.55■■■□□ 2.32
CCDC85C-206ENST00000557576 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
CCDC85C-206ENST00000557576 FANCD2Q9BXW9 1451 aa29.37■■■□□ 2.29
CCDC85C-206ENST00000557576 OSCARQ8IYS5 282 aa29.35■■■□□ 2.29
CCDC85C-206ENST00000557576 CFTRP13569 1480 aa29.3■■■□□ 2.28
CCDC85C-206ENST00000557576 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
CCDC85C-206ENST00000557576 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
CCDC85C-206ENST00000557576 PRDM2Q13029 1718 aa29.08■■■□□ 2.25
CCDC85C-206ENST00000557576 RIMBP3CA6NJZ7 1639 aa29.04■■■□□ 2.24
CCDC85C-206ENST00000557576 RIMBP3BA6NNM3 1639 aa29.04■■■□□ 2.24
CCDC85C-206ENST00000557576 RIMBP3Q9UFD9 1639 aa29.04■■■□□ 2.24
CCDC85C-206ENST00000557576 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
CCDC85C-206ENST00000557576 ARHGEF11O15085 1522 aa28.86■■■□□ 2.21
CCDC85C-206ENST00000557576 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
CCDC85C-206ENST00000557576 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
CCDC85C-206ENST00000557576 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
CCDC85C-206ENST00000557576 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
CCDC85C-206ENST00000557576 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
CCDC85C-206ENST00000557576 TRHP20396 242 aaPredicted RBP28.72■■■□□ 2.19
CCDC85C-206ENST00000557576 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
CCDC85C-206ENST00000557576 FBLN2P98095 1184 aa28.68■■■□□ 2.18
CCDC85C-206ENST00000557576 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
CCDC85C-206ENST00000557576 CHD1O14646 1710 aa28.64■■■□□ 2.18
CCDC85C-206ENST00000557576 AQRO60306 1485 aaKnown RBP eCLIP28.64■■■□□ 2.177e-6■■□□□ 13.1
CCDC85C-206ENST00000557576 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
CCDC85C-206ENST00000557576 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
CCDC85C-206ENST00000557576 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
CCDC85C-206ENST00000557576 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
CCDC85C-206ENST00000557576 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.14
CCDC85C-206ENST00000557576 CUX1P39880 1505 aa28.38■■■□□ 2.13
CCDC85C-206ENST00000557576 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
CCDC85C-206ENST00000557576 SOGA1O94964 1423 aa28.33■■■□□ 2.13
CCDC85C-206ENST00000557576 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
CCDC85C-206ENST00000557576 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
CCDC85C-206ENST00000557576 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
CCDC85C-206ENST00000557576 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CCDC85C-206ENST00000557576 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
CCDC85C-206ENST00000557576 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
CCDC85C-206ENST00000557576 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
CCDC85C-206ENST00000557576 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
CCDC85C-206ENST00000557576 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
CCDC85C-206ENST00000557576 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
CCDC85C-206ENST00000557576 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
CCDC85C-206ENST00000557576 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
CCDC85C-206ENST00000557576 SYNJ2O15056 1496 aa28.03■■■□□ 2.08
CCDC85C-206ENST00000557576 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
CCDC85C-206ENST00000557576 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
CCDC85C-206ENST00000557576 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
CCDC85C-206ENST00000557576 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
CCDC85C-206ENST00000557576 GRIN2AQ12879 1464 aa27.73■■■□□ 2.03
CCDC85C-206ENST00000557576 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
CCDC85C-206ENST00000557576 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
CCDC85C-206ENST00000557576 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
CCDC85C-206ENST00000557576 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
CCDC85C-206ENST00000557576 NUP160Q12769 1436 aa27.59■■■□□ 2.01
CCDC85C-206ENST00000557576 KIF27Q86VH2 1401 aa27.57■■■□□ 2
CCDC85C-206ENST00000557576 KIF13AQ9H1H9 1805 aa27.54■■■□□ 2
CCDC85C-206ENST00000557576 SHROOM2Q13796 1616 aa27.53■■■□□ 2
CCDC85C-206ENST00000557576 PRG4Q92954 1404 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms