RNA–Protein interactions for RNA: ENST00000404760.5

BRD1-203, Transcript of bromodomain containing 1, humanhuman

TSL 2 BASIC

Gene BRD1, Length 4,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-203ENST00000404760 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
BRD1-203ENST00000404760 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
BRD1-203ENST00000404760 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
BRD1-203ENST00000404760 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
BRD1-203ENST00000404760 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
BRD1-203ENST00000404760 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
BRD1-203ENST00000404760 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
BRD1-203ENST00000404760 APLP2Q06481 763 aa18.52■□□□□ 0.56
BRD1-203ENST00000404760 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
BRD1-203ENST00000404760 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
BRD1-203ENST00000404760 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
BRD1-203ENST00000404760 ZEB1P37275 1124 aaPredicted RBP18.26■□□□□ 0.51
BRD1-203ENST00000404760 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
BRD1-203ENST00000404760 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
BRD1-203ENST00000404760 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
BRD1-203ENST00000404760 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
BRD1-203ENST00000404760 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
BRD1-203ENST00000404760 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
BRD1-203ENST00000404760 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
BRD1-203ENST00000404760 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
BRD1-203ENST00000404760 ABCC9O60706 1549 aa17.82■□□□□ 0.44
BRD1-203ENST00000404760 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
BRD1-203ENST00000404760 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
BRD1-203ENST00000404760 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
BRD1-203ENST00000404760 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
BRD1-203ENST00000404760 HRCP23327 699 aa17.73■□□□□ 0.43
BRD1-203ENST00000404760 NACADO15069 1562 aa17.59■□□□□ 0.41
BRD1-203ENST00000404760 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
BRD1-203ENST00000404760 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
BRD1-203ENST00000404760 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.38
BRD1-203ENST00000404760 NEFLP07196 543 aa17.34■□□□□ 0.37
BRD1-203ENST00000404760 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.351e-8■□□□□ 9.4
BRD1-203ENST00000404760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
BRD1-203ENST00000404760 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
BRD1-203ENST00000404760 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
BRD1-203ENST00000404760 MYT1Q01538 1121 aa17.2■□□□□ 0.34
BRD1-203ENST00000404760 ITGAEP38570 1179 aa17.18■□□□□ 0.34
BRD1-203ENST00000404760 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
BRD1-203ENST00000404760 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
BRD1-203ENST00000404760 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
BRD1-203ENST00000404760 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.29
BRD1-203ENST00000404760 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
BRD1-203ENST00000404760 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
BRD1-203ENST00000404760 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
BRD1-203ENST00000404760 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
BRD1-203ENST00000404760 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
BRD1-203ENST00000404760 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
BRD1-203ENST00000404760 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
BRD1-203ENST00000404760 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
BRD1-203ENST00000404760 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
BRD1-203ENST00000404760 EEA1Q15075 1411 aa16.65■□□□□ 0.26
BRD1-203ENST00000404760 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
BRD1-203ENST00000404760 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
BRD1-203ENST00000404760 BCANQ96GW7 911 aa16.6■□□□□ 0.25
BRD1-203ENST00000404760 ANP32CO43423 234 aa16.6■□□□□ 0.25
BRD1-203ENST00000404760 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
BRD1-203ENST00000404760 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
BRD1-203ENST00000404760 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
BRD1-203ENST00000404760 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
BRD1-203ENST00000404760 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
BRD1-203ENST00000404760 FBLN2P98095 1184 aa16.44■□□□□ 0.22
BRD1-203ENST00000404760 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
BRD1-203ENST00000404760 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
BRD1-203ENST00000404760 UNC13AQ9UPW8 1703 aa16.39■□□□□ 0.21
BRD1-203ENST00000404760 CLIP1P30622 1438 aa16.38■□□□□ 0.21
BRD1-203ENST00000404760 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
BRD1-203ENST00000404760 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
BRD1-203ENST00000404760 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
BRD1-203ENST00000404760 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
BRD1-203ENST00000404760 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
BRD1-203ENST00000404760 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
BRD1-203ENST00000404760 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
BRD1-203ENST00000404760 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
BRD1-203ENST00000404760 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
BRD1-203ENST00000404760 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
BRD1-203ENST00000404760 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
BRD1-203ENST00000404760 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
BRD1-203ENST00000404760 WIZO95785 1651 aa16.29■□□□□ 0.2
BRD1-203ENST00000404760 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
BRD1-203ENST00000404760 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
BRD1-203ENST00000404760 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
BRD1-203ENST00000404760 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
BRD1-203ENST00000404760 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
BRD1-203ENST00000404760 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
BRD1-203ENST00000404760 MIER1Q8N108 512 aa16.2■□□□□ 0.18
BRD1-203ENST00000404760 NEFMP07197 916 aa16.18■□□□□ 0.18
BRD1-203ENST00000404760 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
BRD1-203ENST00000404760 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 FKBP8Q14318 412 aa16.14■□□□□ 0.17
BRD1-203ENST00000404760 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
BRD1-203ENST00000404760 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
BRD1-203ENST00000404760 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
BRD1-203ENST00000404760 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
BRD1-203ENST00000404760 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
BRD1-203ENST00000404760 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
BRD1-203ENST00000404760 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
BRD1-203ENST00000404760 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
BRD1-203ENST00000404760 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms