RNA–Protein interactions for RNA: ENST00000490097.5

AGAP3-221, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-221ENST00000490097 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
AGAP3-221ENST00000490097 CCDC180Q9P1Z9 1646 aa31.52■■■□□ 2.64
AGAP3-221ENST00000490097 ABCC9O60706 1549 aa30.98■■■□□ 2.55
AGAP3-221ENST00000490097 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
AGAP3-221ENST00000490097 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
AGAP3-221ENST00000490097 RB1CC1Q8TDY2 1594 aa29.65■■■□□ 2.34
AGAP3-221ENST00000490097 NACADO15069 1562 aa29.59■■■□□ 2.33
AGAP3-221ENST00000490097 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
AGAP3-221ENST00000490097 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
AGAP3-221ENST00000490097 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
AGAP3-221ENST00000490097 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
AGAP3-221ENST00000490097 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
AGAP3-221ENST00000490097 SCRIBQ14160 1630 aa28.86■■■□□ 2.21
AGAP3-221ENST00000490097 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
AGAP3-221ENST00000490097 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
AGAP3-221ENST00000490097 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
AGAP3-221ENST00000490097 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
AGAP3-221ENST00000490097 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
AGAP3-221ENST00000490097 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
AGAP3-221ENST00000490097 SMARCA4P51532 1647 aa27.53■■■□□ 2
AGAP3-221ENST00000490097 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
AGAP3-221ENST00000490097 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
AGAP3-221ENST00000490097 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
AGAP3-221ENST00000490097 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
AGAP3-221ENST00000490097 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
AGAP3-221ENST00000490097 WIZO95785 1651 aa27.32■■□□□ 1.96
AGAP3-221ENST00000490097 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
AGAP3-221ENST00000490097 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
AGAP3-221ENST00000490097 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
AGAP3-221ENST00000490097 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
AGAP3-221ENST00000490097 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
AGAP3-221ENST00000490097 NESP48681 1621 aa26.84■■□□□ 1.89
AGAP3-221ENST00000490097 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
AGAP3-221ENST00000490097 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
AGAP3-221ENST00000490097 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
AGAP3-221ENST00000490097 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
AGAP3-221ENST00000490097 THOC2Q8NI27 1593 aaKnown RBP26.51■■□□□ 1.83
AGAP3-221ENST00000490097 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
AGAP3-221ENST00000490097 CUX2O14529 1486 aa26.42■■□□□ 1.82
AGAP3-221ENST00000490097 CFTRP13569 1480 aa26.35■■□□□ 1.81
AGAP3-221ENST00000490097 PDS5BQ9NTI5 1447 aa26.33■■□□□ 1.81
AGAP3-221ENST00000490097 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
AGAP3-221ENST00000490097 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
AGAP3-221ENST00000490097 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
AGAP3-221ENST00000490097 WDR62O43379 1518 aa26.19■■□□□ 1.78
AGAP3-221ENST00000490097 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
AGAP3-221ENST00000490097 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
AGAP3-221ENST00000490097 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
AGAP3-221ENST00000490097 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
AGAP3-221ENST00000490097 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.723e-6■■■■□ 25.8
AGAP3-221ENST00000490097 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
AGAP3-221ENST00000490097 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
AGAP3-221ENST00000490097 CUX1P39880 1505 aa25.76■■□□□ 1.71
AGAP3-221ENST00000490097 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
AGAP3-221ENST00000490097 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
AGAP3-221ENST00000490097 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
AGAP3-221ENST00000490097 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
AGAP3-221ENST00000490097 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
AGAP3-221ENST00000490097 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
AGAP3-221ENST00000490097 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
AGAP3-221ENST00000490097 FGD5Q6ZNL6 1462 aa25.61■■□□□ 1.69
AGAP3-221ENST00000490097 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
AGAP3-221ENST00000490097 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
AGAP3-221ENST00000490097 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
AGAP3-221ENST00000490097 SOGA1O94964 1423 aa25.54■■□□□ 1.68
AGAP3-221ENST00000490097 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
AGAP3-221ENST00000490097 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
AGAP3-221ENST00000490097 AQRO60306 1485 aaKnown RBP eCLIP25.41■■□□□ 1.663e-7■■■■■ 28.3
AGAP3-221ENST00000490097 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
AGAP3-221ENST00000490097 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
AGAP3-221ENST00000490097 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
AGAP3-221ENST00000490097 CHD1O14646 1710 aa25.28■■□□□ 1.64
AGAP3-221ENST00000490097 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
AGAP3-221ENST00000490097 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
AGAP3-221ENST00000490097 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
AGAP3-221ENST00000490097 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
AGAP3-221ENST00000490097 PBRM1Q86U86 1689 aa25.2■■□□□ 1.62
AGAP3-221ENST00000490097 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
AGAP3-221ENST00000490097 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
AGAP3-221ENST00000490097 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
AGAP3-221ENST00000490097 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
AGAP3-221ENST00000490097 FBLN2P98095 1184 aa25.08■■□□□ 1.61
AGAP3-221ENST00000490097 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
AGAP3-221ENST00000490097 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
AGAP3-221ENST00000490097 IGF1RP08069 1367 aa25.05■■□□□ 1.6
AGAP3-221ENST00000490097 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
AGAP3-221ENST00000490097 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
AGAP3-221ENST00000490097 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
AGAP3-221ENST00000490097 EEA1Q15075 1411 aa25.03■■□□□ 1.6
AGAP3-221ENST00000490097 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
AGAP3-221ENST00000490097 SYNJ2O15056 1496 aa25■■□□□ 1.59
AGAP3-221ENST00000490097 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
AGAP3-221ENST00000490097 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
AGAP3-221ENST00000490097 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
AGAP3-221ENST00000490097 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
AGAP3-221ENST00000490097 CARMIL1Q5VZK9 1371 aa24.96■■□□□ 1.59
AGAP3-221ENST00000490097 CUL7Q14999 1698 aa24.93■■□□□ 1.58
AGAP3-221ENST00000490097 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
AGAP3-221ENST00000490097 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
AGAP3-221ENST00000490097 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms