RNA–Protein interactions for RNA: ENST00000567670.5

SLC19A1-212, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC19A1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-212ENST00000567670 NISCHQ9Y2I1 1504 aa50.73■■■■■ 5.71
SLC19A1-212ENST00000567670 CCDC180Q9P1Z9 1646 aa44.23■■■■■ 4.67
SLC19A1-212ENST00000567670 ZCCHC6Q5VYS8 1495 aaKnown RBP42.51■■■■■ 4.4
SLC19A1-212ENST00000567670 ABCC9O60706 1549 aa42.43■■■■■ 4.38
SLC19A1-212ENST00000567670 DCAF8L2P0C7V8 631 aa42.29■■■■■ 4.36
SLC19A1-212ENST00000567670 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.29
SLC19A1-212ENST00000567670 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.22
SLC19A1-212ENST00000567670 NACADO15069 1562 aa41.36■■■■■ 4.21
SLC19A1-212ENST00000567670 SHROOM4Q9ULL8 1493 aa41.35■■■■■ 4.21
SLC19A1-212ENST00000567670 RB1CC1Q8TDY2 1594 aa41.11■■■■■ 4.17
SLC19A1-212ENST00000567670 SCRIBQ14160 1630 aa40.82■■■■■ 4.13
SLC19A1-212ENST00000567670 UNC13AQ9UPW8 1703 aa40.26■■■■■ 4.03
SLC19A1-212ENST00000567670 PABPN1Q86U42 306 aaKnown RBP eCLIP40.06■■■■■ 4
SLC19A1-212ENST00000567670 BICRAQ9NZM4 1560 aa39.94■■■■□ 3.98
SLC19A1-212ENST00000567670 SUPT5HO00267 1087 aaKnown RBP39.62■■■■□ 3.93
SLC19A1-212ENST00000567670 CECR2Q9BXF3 1484 aa39.56■■■■□ 3.92
SLC19A1-212ENST00000567670 RSF1Q96T23 1441 aaPredicted RBP39.28■■■■□ 3.88
SLC19A1-212ENST00000567670 MROH2BQ7Z745 1585 aa39.24■■■■□ 3.87
SLC19A1-212ENST00000567670 BAZ1AQ9NRL2 1556 aaPredicted RBP39.15■■■■□ 3.86
SLC19A1-212ENST00000567670 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
SLC19A1-212ENST00000567670 WIZO95785 1651 aa38.88■■■■□ 3.81
SLC19A1-212ENST00000567670 EIF4G1Q04637 1599 aaKnown RBP38.76■■■■□ 3.8
SLC19A1-212ENST00000567670 ATAD2BQ9ULI0 1458 aa38.55■■■■□ 3.76
SLC19A1-212ENST00000567670 PEG3Q9GZU2 1588 aa38.51■■■■□ 3.76
SLC19A1-212ENST00000567670 SMARCA2P51531 1590 aa38.43■■■■□ 3.74
SLC19A1-212ENST00000567670 TOP2AP11388 1531 aaKnown RBP38.39■■■■□ 3.74
SLC19A1-212ENST00000567670 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
SLC19A1-212ENST00000567670 CC2D2AQ9P2K1 1620 aa38.29■■■■□ 3.72
SLC19A1-212ENST00000567670 NCAPD3P42695 1498 aa38.24■■■■□ 3.71
SLC19A1-212ENST00000567670 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
SLC19A1-212ENST00000567670 HMGXB3Q12766 1538 aa38.08■■■■□ 3.69
SLC19A1-212ENST00000567670 DNAJC5BQ9UF47 199 aa37.88■■■■□ 3.65
SLC19A1-212ENST00000567670 CHIC1Q5VXU3 224 aa37.67■■■■□ 3.62
SLC19A1-212ENST00000567670 CFTRP13569 1480 aa37.31■■■■□ 3.56
SLC19A1-212ENST00000567670 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
SLC19A1-212ENST00000567670 TRIM41Q8WV44 630 aa37.2■■■■□ 3.55
SLC19A1-212ENST00000567670 ABCC8Q09428 1581 aa37.19■■■■□ 3.54
SLC19A1-212ENST00000567670 NESP48681 1621 aa37.15■■■■□ 3.54
SLC19A1-212ENST00000567670 WRNQ14191 1432 aaPredicted RBP eCLIP36.96■■■■□ 3.51
SLC19A1-212ENST00000567670 LAMC3Q9Y6N6 1575 aa36.94■■■■□ 3.5
SLC19A1-212ENST00000567670 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
SLC19A1-212ENST00000567670 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
SLC19A1-212ENST00000567670 SYNJ1O43426 1573 aa36.81■■■■□ 3.48
SLC19A1-212ENST00000567670 PDS5BQ9NTI5 1447 aa36.74■■■■□ 3.47
SLC19A1-212ENST00000567670 CUX1P39880 1505 aa36.69■■■■□ 3.46
SLC19A1-212ENST00000567670 CEP164Q9UPV0 1460 aa36.63■■■■□ 3.46
SLC19A1-212ENST00000567670 FAM9AQ8IZU1 332 aaPredicted RBP36.63■■■■□ 3.45
SLC19A1-212ENST00000567670 TOP2BQ02880 1626 aa36.62■■■■□ 3.45
SLC19A1-212ENST00000567670 KIF21AQ7Z4S6 1674 aa36.56■■■■□ 3.44
SLC19A1-212ENST00000567670 BIVM-ERCC5R4GMW8 1640 aa36.55■■■■□ 3.44
SLC19A1-212ENST00000567670 SOGA1O94964 1423 aa36.47■■■■□ 3.43
SLC19A1-212ENST00000567670 URB2Q14146 1524 aaKnown RBP36.43■■■■□ 3.42
SLC19A1-212ENST00000567670 TOPBP1Q92547 1522 aa36.41■■■■□ 3.42
SLC19A1-212ENST00000567670 DNMBPQ6XZF7 1577 aa36.39■■■■□ 3.42
SLC19A1-212ENST00000567670 RUSC2Q8N2Y8 1516 aa36.38■■■■□ 3.41
SLC19A1-212ENST00000567670 ERCC6Q03468 1493 aa36.36■■■■□ 3.41
SLC19A1-212ENST00000567670 FGD5Q6ZNL6 1462 aa36.35■■■■□ 3.41
SLC19A1-212ENST00000567670 LOC105371045A0A1W2PR82 267 aa36.33■■■■□ 3.41
SLC19A1-212ENST00000567670 MRC2Q9UBG0 1479 aa36.27■■■■□ 3.4
SLC19A1-212ENST00000567670 POLA1P09884 1462 aaPredicted RBP36.23■■■■□ 3.39
SLC19A1-212ENST00000567670 EHMT2Q96KQ7 1210 aa36.22■■■■□ 3.39
SLC19A1-212ENST00000567670 RAD54L2Q9Y4B4 1467 aa36.18■■■■□ 3.38
SLC19A1-212ENST00000567670 CSRNP3Q8WYN3 585 aa36.15■■■■□ 3.38
SLC19A1-212ENST00000567670 EEA1Q15075 1411 aa36.13■■■■□ 3.37
SLC19A1-212ENST00000567670 CUX2O14529 1486 aa36.07■■■■□ 3.36
SLC19A1-212ENST00000567670 WDR62O43379 1518 aa36.06■■■■□ 3.36
SLC19A1-212ENST00000567670 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
SLC19A1-212ENST00000567670 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
SLC19A1-212ENST00000567670 ABCA10Q8WWZ4 1543 aa35.96■■■■□ 3.35
SLC19A1-212ENST00000567670 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
SLC19A1-212ENST00000567670 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
SLC19A1-212ENST00000567670 IGF1RP08069 1367 aa35.83■■■■□ 3.33
SLC19A1-212ENST00000567670 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
SLC19A1-212ENST00000567670 IFT140Q96RY7 1462 aa35.77■■■■□ 3.32
SLC19A1-212ENST00000567670 UBTFP17480 764 aaKnown RBP35.71■■■■□ 3.31
SLC19A1-212ENST00000567670 AQRO60306 1485 aaKnown RBP eCLIP35.7■■■■□ 3.318e-9■■■■■ 38.8
SLC19A1-212ENST00000567670 PRXQ9BXM0 1461 aa35.7■■■■□ 3.31
SLC19A1-212ENST00000567670 GAPVD1Q14C86 1478 aa35.7■■■■□ 3.31
SLC19A1-212ENST00000567670 RAPGEF2Q9Y4G8 1499 aa35.7■■■■□ 3.31
SLC19A1-212ENST00000567670 ZNF608Q9ULD9 1512 aaPredicted RBP35.7■■■■□ 3.3
SLC19A1-212ENST00000567670 GOLGA3Q08378 1498 aa35.69■■■■□ 3.3
SLC19A1-212ENST00000567670 KIF21BO75037 1637 aa35.68■■■■□ 3.3
SLC19A1-212ENST00000567670 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
SLC19A1-212ENST00000567670 CARMIL1Q5VZK9 1371 aa35.63■■■■□ 3.29
SLC19A1-212ENST00000567670 TNIKQ9UKE5 1360 aa35.53■■■■□ 3.28
SLC19A1-212ENST00000567670 ERICH3Q5RHP9 1530 aa35.51■■■■□ 3.27
SLC19A1-212ENST00000567670 EIF4G3O43432 1585 aaKnown RBP35.45■■■■□ 3.27
SLC19A1-212ENST00000567670 GRIN2BQ13224 1484 aa35.45■■■■□ 3.27
SLC19A1-212ENST00000567670 PBRM1Q86U86 1689 aa35.42■■■■□ 3.26
SLC19A1-212ENST00000567670 CUL7Q14999 1698 aa35.4■■■■□ 3.26
SLC19A1-212ENST00000567670 RANGAP1P46060 587 aaPredicted RBP35.36■■■■□ 3.25
SLC19A1-212ENST00000567670 CEP162Q5TB80 1403 aa35.34■■■■□ 3.25
SLC19A1-212ENST00000567670 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
SLC19A1-212ENST00000567670 FHAD1B1AJZ9 1412 aa35.28■■■■□ 3.24
SLC19A1-212ENST00000567670 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
SLC19A1-212ENST00000567670 CLIP1P30622 1438 aa35.15■■■■□ 3.22
SLC19A1-212ENST00000567670 MAGI1Q96QZ7 1491 aaPredicted RBP35.14■■■■□ 3.22
SLC19A1-212ENST00000567670 FBLN2P98095 1184 aa35.13■■■■□ 3.21
SLC19A1-212ENST00000567670 CHMP7Q8WUX9 453 aaPredicted RBP35.11■■■■□ 3.21
SLC19A1-212ENST00000567670 SYNJ2O15056 1496 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms