Protein–RNA interactions for Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 SEC14L1-206ENST00000561633 603 ntTSL 1 (best)15.92■□□□□ 0.147e-20■■■■■ 28.2
SSBP05455 SEC14L1-207ENST00000561721 637 ntTSL 215.53■□□□□ 0.087e-20■■■■■ 28.2
SSBP05455 SNHG20-203ENST00000565256 1234 ntTSL 1 (best)14.82□□□□□ -0.047e-20■■■■■ 28.2
SSBP05455 SNHG20-205ENST00000568363 786 ntTSL 1 (best)14.41□□□□□ -0.17e-20■■■■■ 28.2
SSBP05455 SEC14L1-209ENST00000564509 806 ntTSL 1 (best)14.2□□□□□ -0.147e-20■■■■■ 28.2
SSBP05455 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.157e-20■■■■■ 28.2
SSBP05455 SEC14L1-224ENST00000589827 1791 ntTSL 213.5□□□□□ -0.257e-20■■■■■ 28.2
SSBP05455 SEC14L1-211ENST00000569632 377 ntTSL 1 (best)13.13□□□□□ -0.317e-20■■■■■ 28.2
SSBP05455 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC13.12□□□□□ -0.317e-20■■■■■ 28.2
SSBP05455 SNHG20-201ENST00000366365 1028 ntTSL 212.11□□□□□ -0.477e-20■■■■■ 28.2
SSBP05455 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.57e-20■■■■■ 28.2
SSBP05455 SCARNA16-201ENST00000515981 187 ntBASIC10.84□□□□□ -0.677e-20■■■■■ 28.2
SSBP05455 SEC14L1-208ENST00000564414 528 ntTSL 1 (best)6.57□□□□□ -1.367e-20■■■■■ 28.2
SSBP05455 SEC14L1-210ENST00000568056 424 ntTSL 1 (best)5.78□□□□□ -1.487e-20■■■■■ 28.2
SSBP05455 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.89■■□□□ 1.251e-6■■■■■ 27.5
SSBP05455 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 11e-6■■■■■ 27.5
SSBP05455 BCR-207ENST00000463770 168 ntTSL 1 (best)16.37■□□□□ 0.211e-6■■■■■ 27.5
SSBP05455 BCR-212ENST00000479188 658 ntTSL 415.15■□□□□ 0.021e-6■■■■■ 27.5
SSBP05455 BCR-214ENST00000487679 231 ntTSL 1 (best)9.25□□□□□ -0.931e-6■■■■■ 27.5
SSBP05455 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.49■■□□□ 1.511e-15■■■■■ 27
SSBP05455 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.971e-15■■■■■ 27
SSBP05455 LLGL2-220ENST00000582860 638 ntTSL 318.89■□□□□ 0.611e-15■■■■■ 27
SSBP05455 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.34■□□□□ 0.531e-15■■■■■ 27
SSBP05455 LLGL2-215ENST00000580027 1875 ntTSL 218.26■□□□□ 0.511e-15■■■■■ 27
SSBP05455 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.05■□□□□ 0.481e-15■■■■■ 27
SSBP05455 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.191e-15■■■■■ 27
SSBP05455 LLGL2-204ENST00000545227 3527 ntTSL 212.88□□□□□ -0.351e-15■■■■■ 27
SSBP05455 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.361e-7■■■■■ 26.8
SSBP05455 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.421e-7■■■■■ 26.8
SSBP05455 CTNND1-235ENST00000533189 498 ntTSL 312.05□□□□□ -0.481e-7■■■■■ 26.8
SSBP05455 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.521e-7■■■■■ 26.8
SSBP05455 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC11.07□□□□□ -0.641e-7■■■■■ 26.8
SSBP05455 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.721e-7■■■■■ 26.8
SSBP05455 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.721e-7■■■■■ 26.8
SSBP05455 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.41□□□□□ -0.741e-7■■■■■ 26.8
SSBP05455 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC10.17□□□□□ -0.781e-7■■■■■ 26.8
SSBP05455 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.01□□□□□ -0.811e-7■■■■■ 26.8
SSBP05455 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.92□□□□□ -0.821e-7■■■■■ 26.8
SSBP05455 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.92□□□□□ -0.821e-7■■■■■ 26.8
SSBP05455 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.92□□□□□ -0.821e-7■■■■■ 26.8
SSBP05455 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.89□□□□□ -0.831e-7■■■■■ 26.8
SSBP05455 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.87□□□□□ -0.831e-7■■■■■ 26.8
SSBP05455 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.87□□□□□ -0.831e-7■■■■■ 26.8
SSBP05455 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC9.8□□□□□ -0.841e-7■■■■■ 26.8
SSBP05455 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.59□□□□□ -0.871e-7■■■■■ 26.8
SSBP05455 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.55□□□□□ -0.881e-7■■■■■ 26.8
SSBP05455 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.55□□□□□ -0.881e-7■■■■■ 26.8
SSBP05455 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.44□□□□□ -0.91e-7■■■■■ 26.8
SSBP05455 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.43□□□□□ -0.91e-7■■■■■ 26.8
SSBP05455 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.38□□□□□ -0.911e-7■■■■■ 26.8
SSBP05455 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.37□□□□□ -0.911e-7■■■■■ 26.8
SSBP05455 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.29□□□□□ -0.921e-7■■■■■ 26.8
SSBP05455 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.93□□□□□ -0.981e-7■■■■■ 26.8
SSBP05455 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.8□□□□□ -11e-7■■■■■ 26.8
SSBP05455 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.32□□□□□ -1.081e-7■■■■■ 26.8
SSBP05455 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.32□□□□□ -1.081e-7■■■■■ 26.8
SSBP05455 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-7■■■■■ 26.8
SSBP05455 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.14□□□□□ -1.111e-7■■■■■ 26.8
SSBP05455 CTNND1-209ENST00000524579 505 ntTSL 47.56□□□□□ -1.21e-7■■■■■ 26.8
SSBP05455 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.48□□□□□ -1.211e-7■■■■■ 26.8
SSBP05455 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.48□□□□□ -1.211e-7■■■■■ 26.8
SSBP05455 AC084082.1-201ENST00000520930 451 ntTSL 516.76■□□□□ 0.274e-10■■■■□ 26.7
SSBP05455 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC12.94□□□□□ -0.344e-10■■■■□ 26.7
SSBP05455 RN7SKP255-201ENST00000363442 313 ntBASIC14.87□□□□□ -0.032e-7■■■■□ 25.8
SSBP05455 AGBL5-203ENST00000421915 559 ntTSL 414.33□□□□□ -0.123e-21■■■■□ 24.6
SSBP05455 HSPG2-210ENST00000481644 839 ntTSL 220.69■□□□□ 0.94e-6■■■■□ 24.3
SSBP05455 HSPG2-211ENST00000486901 3586 ntTSL 213.84□□□□□ -0.194e-6■■■■□ 24.3
SSBP05455 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.864e-6■■■■□ 24.3
SSBP05455 AC051619.7-201ENST00000568314 623 ntBASIC17.95■□□□□ 0.461e-7■■■■□ 24.2
SSBP05455 SNORD3B-1-201ENST00000577988 758 ntBASIC15.38■□□□□ 0.056e-8■■■■□ 24
SSBP05455 SNORD3B-1-203ENST00000631292 217 nt12.35□□□□□ -0.436e-8■■■■□ 24
SSBP05455 SNORD3B-1-202ENST00000617128 218 nt12.29□□□□□ -0.446e-8■■■■□ 24
SSBP05455 NKD1-202ENST00000564336 477 ntTSL 324.89■■□□□ 1.582e-9■■■■□ 23.2
SSBP05455 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.129e-43■■■■□ 22.9
SSBP05455 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.939e-43■■■■□ 22.9
SSBP05455 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.839e-43■■■■□ 22.9
SSBP05455 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.759e-43■■■■□ 22.9
SSBP05455 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.699e-43■■■■□ 22.9
SSBP05455 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.699e-43■■■■□ 22.9
SSBP05455 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.059e-43■■■■□ 22.9
SSBP05455 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.059e-43■■■■□ 22.9
SSBP05455 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.119e-43■■■■□ 22.9
SSBP05455 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.52■■□□□ 1.24e-14■■■■□ 22.8
SSBP05455 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.862e-6■■■■□ 22.7
SSBP05455 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.44■■□□□ 1.342e-6■■■■□ 22.7
SSBP05455 UBE2I-215ENST00000567074 884 ntTSL 1 (best)21.1■□□□□ 0.972e-6■■■■□ 22.7
SSBP05455 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.942e-6■■■■□ 22.7
SSBP05455 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.852e-6■■■■□ 22.7
SSBP05455 UBE2I-208ENST00000473256 1771 ntTSL 220.29■□□□□ 0.842e-6■■■■□ 22.7
SSBP05455 UBE2I-218ENST00000568288 501 ntTSL 519.57■□□□□ 0.722e-6■■■■□ 22.7
SSBP05455 UBE2I-217ENST00000568209 266 ntTSL 519.3■□□□□ 0.682e-6■■■■□ 22.7
SSBP05455 UBE2I-212ENST00000566159 2642 nt17.29■□□□□ 0.362e-6■■■■□ 22.7
SSBP05455 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.32e-6■■■■□ 22.7
SSBP05455 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.162e-6■■■■□ 22.7
SSBP05455 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.12e-6■■■■□ 22.7
SSBP05455 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.022e-6■■■■□ 22.7
SSBP05455 UBE2I-214ENST00000566775 396 ntTSL 39.46□□□□□ -0.92e-6■■■■□ 22.7
SSBP05455 CHD8-210ENST00000555962 1232 ntTSL 59.95□□□□□ -0.828e-7■■■■□ 22.6
SSBP05455 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.856e-9■■■■□ 22.6
SSBP05455 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.856e-9■■■■□ 22.6
Retrieved 100 of 672 protein–RNA pairs in 22.6 ms