RNA–Protein interactions for RNA: ENST00000397514.7

UBE2I-203, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2I, Length 2,976 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-203ENST00000397514 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.85
UBE2I-203ENST00000397514 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
UBE2I-203ENST00000397514 DCAF8L2P0C7V8 631 aa33.67■■■□□ 2.98
UBE2I-203ENST00000397514 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
UBE2I-203ENST00000397514 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
UBE2I-203ENST00000397514 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.85
UBE2I-203ENST00000397514 ABCC9O60706 1549 aa32.12■■■□□ 2.73
UBE2I-203ENST00000397514 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
UBE2I-203ENST00000397514 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
UBE2I-203ENST00000397514 CHIC1Q5VXU3 224 aa31.5■■■□□ 2.63
UBE2I-203ENST00000397514 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
UBE2I-203ENST00000397514 NACADO15069 1562 aa30.97■■■□□ 2.55
UBE2I-203ENST00000397514 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
UBE2I-203ENST00000397514 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
UBE2I-203ENST00000397514 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.53
UBE2I-203ENST00000397514 LOC105371045A0A1W2PR82 267 aa30.86■■■□□ 2.53
UBE2I-203ENST00000397514 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
UBE2I-203ENST00000397514 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.51
UBE2I-203ENST00000397514 EHMT2Q96KQ7 1210 aa30.62■■■□□ 2.49
UBE2I-203ENST00000397514 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
UBE2I-203ENST00000397514 FAM9AQ8IZU1 332 aaPredicted RBP30.51■■■□□ 2.47
UBE2I-203ENST00000397514 HRCP23327 699 aa30.46■■■□□ 2.47
UBE2I-203ENST00000397514 WIZO95785 1651 aa30.4■■■□□ 2.46
UBE2I-203ENST00000397514 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
UBE2I-203ENST00000397514 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
UBE2I-203ENST00000397514 PPARGC1BQ86YN6 1023 aaKnown RBP30.23■■■□□ 2.43
UBE2I-203ENST00000397514 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
UBE2I-203ENST00000397514 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
UBE2I-203ENST00000397514 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
UBE2I-203ENST00000397514 TRIM26Q12899 539 aaPredicted RBP29.89■■■□□ 2.38
UBE2I-203ENST00000397514 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
UBE2I-203ENST00000397514 ABCC8Q09428 1581 aa29.66■■■□□ 2.34
UBE2I-203ENST00000397514 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
UBE2I-203ENST00000397514 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
UBE2I-203ENST00000397514 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
UBE2I-203ENST00000397514 TTBK1Q5TCY1 1321 aaPredicted RBP29.37■■■□□ 2.29
UBE2I-203ENST00000397514 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
UBE2I-203ENST00000397514 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
UBE2I-203ENST00000397514 SOGA1O94964 1423 aa29.28■■■□□ 2.28
UBE2I-203ENST00000397514 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
UBE2I-203ENST00000397514 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
UBE2I-203ENST00000397514 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
UBE2I-203ENST00000397514 PEG3Q9GZU2 1588 aa29.08■■■□□ 2.25
UBE2I-203ENST00000397514 ZEB1P37275 1124 aaPredicted RBP29.06■■■□□ 2.24
UBE2I-203ENST00000397514 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
UBE2I-203ENST00000397514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.03■■■□□ 2.24
UBE2I-203ENST00000397514 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
UBE2I-203ENST00000397514 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
UBE2I-203ENST00000397514 CCER1Q8TC90 406 aaPredicted RBP28.87■■■□□ 2.21
UBE2I-203ENST00000397514 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
UBE2I-203ENST00000397514 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
UBE2I-203ENST00000397514 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
UBE2I-203ENST00000397514 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
UBE2I-203ENST00000397514 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
UBE2I-203ENST00000397514 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
UBE2I-203ENST00000397514 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.15
UBE2I-203ENST00000397514 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
UBE2I-203ENST00000397514 CUX1P39880 1505 aa28.45■■■□□ 2.15
UBE2I-203ENST00000397514 EEA1Q15075 1411 aa28.45■■■□□ 2.14
UBE2I-203ENST00000397514 CFTRP13569 1480 aa28.45■■■□□ 2.14
UBE2I-203ENST00000397514 HNRNPUL2Q1KMD3 747 aaKnown RBP28.41■■■□□ 2.14
UBE2I-203ENST00000397514 NESP48681 1621 aa28.41■■■□□ 2.14
UBE2I-203ENST00000397514 TOP2BQ02880 1626 aa28.39■■■□□ 2.14
UBE2I-203ENST00000397514 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
UBE2I-203ENST00000397514 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
UBE2I-203ENST00000397514 CLIP1P30622 1438 aa28.3■■■□□ 2.12
UBE2I-203ENST00000397514 APLP2Q06481 763 aa28.25■■■□□ 2.11
UBE2I-203ENST00000397514 DIEXFQ68CQ4 756 aaKnown RBP28.19■■■□□ 2.1
UBE2I-203ENST00000397514 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
UBE2I-203ENST00000397514 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
UBE2I-203ENST00000397514 CUX2O14529 1486 aa28.18■■■□□ 2.1
UBE2I-203ENST00000397514 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
UBE2I-203ENST00000397514 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
UBE2I-203ENST00000397514 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.1
UBE2I-203ENST00000397514 KIF21BO75037 1637 aa28.12■■■□□ 2.09
UBE2I-203ENST00000397514 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
UBE2I-203ENST00000397514 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
UBE2I-203ENST00000397514 ATP1B4Q9UN42 357 aaPredicted RBP28.03■■■□□ 2.08
UBE2I-203ENST00000397514 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
UBE2I-203ENST00000397514 IGF1RP08069 1367 aa28.01■■■□□ 2.07
UBE2I-203ENST00000397514 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
UBE2I-203ENST00000397514 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
UBE2I-203ENST00000397514 NEUROD1Q13562 356 aa27.95■■■□□ 2.07
UBE2I-203ENST00000397514 CARMIL1Q5VZK9 1371 aa27.91■■■□□ 2.06
UBE2I-203ENST00000397514 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
UBE2I-203ENST00000397514 ZNF316A6NFI3 1004 aaPredicted RBP27.89■■■□□ 2.05
UBE2I-203ENST00000397514 ITGAEP38570 1179 aa27.89■■■□□ 2.05
UBE2I-203ENST00000397514 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
UBE2I-203ENST00000397514 YTHDC1Q96MU7 727 aaKnown RBP27.86■■■□□ 2.05
UBE2I-203ENST00000397514 ACIN1Q9UKV3 1341 aaKnown RBP27.84■■■□□ 2.05
UBE2I-203ENST00000397514 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
UBE2I-203ENST00000397514 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
UBE2I-203ENST00000397514 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
UBE2I-203ENST00000397514 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
UBE2I-203ENST00000397514 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
UBE2I-203ENST00000397514 ARHGAP35Q9NRY4 1499 aa27.73■■■□□ 2.03
UBE2I-203ENST00000397514 CENPBP07199 599 aaPredicted RBP27.69■■■□□ 2.02
UBE2I-203ENST00000397514 GTF3C3Q9Y5Q9 886 aa27.69■■■□□ 2.02
UBE2I-203ENST00000397514 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
UBE2I-203ENST00000397514 MIER1Q8N108 512 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms