RNA–Protein interactions for RNA: ENST00000566159.1

UBE2I-212, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

Gene UBE2I, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-212ENST00000566159 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
UBE2I-212ENST00000566159 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
UBE2I-212ENST00000566159 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.11
UBE2I-212ENST00000566159 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
UBE2I-212ENST00000566159 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
UBE2I-212ENST00000566159 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
UBE2I-212ENST00000566159 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
UBE2I-212ENST00000566159 ABCC9O60706 1549 aa27.11■■□□□ 1.93
UBE2I-212ENST00000566159 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
UBE2I-212ENST00000566159 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
UBE2I-212ENST00000566159 NACADO15069 1562 aa26.53■■□□□ 1.84
UBE2I-212ENST00000566159 HRCP23327 699 aa26.35■■□□□ 1.81
UBE2I-212ENST00000566159 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
UBE2I-212ENST00000566159 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
UBE2I-212ENST00000566159 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
UBE2I-212ENST00000566159 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
UBE2I-212ENST00000566159 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
UBE2I-212ENST00000566159 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
UBE2I-212ENST00000566159 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
UBE2I-212ENST00000566159 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
UBE2I-212ENST00000566159 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
UBE2I-212ENST00000566159 WIZO95785 1651 aa25.8■■□□□ 1.72
UBE2I-212ENST00000566159 LOC105371045A0A1W2PR82 267 aa25.63■■□□□ 1.69
UBE2I-212ENST00000566159 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
UBE2I-212ENST00000566159 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
UBE2I-212ENST00000566159 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
UBE2I-212ENST00000566159 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
UBE2I-212ENST00000566159 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
UBE2I-212ENST00000566159 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
UBE2I-212ENST00000566159 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
UBE2I-212ENST00000566159 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
UBE2I-212ENST00000566159 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
UBE2I-212ENST00000566159 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
UBE2I-212ENST00000566159 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
UBE2I-212ENST00000566159 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
UBE2I-212ENST00000566159 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
UBE2I-212ENST00000566159 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
UBE2I-212ENST00000566159 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
UBE2I-212ENST00000566159 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
UBE2I-212ENST00000566159 SCAF1Q9H7N4 1312 aaKnown RBP24.78■■□□□ 1.56
UBE2I-212ENST00000566159 PELP1Q8IZL8 1130 aaKnown RBP24.7■■□□□ 1.54
UBE2I-212ENST00000566159 SOGA1O94964 1423 aa24.68■■□□□ 1.54
UBE2I-212ENST00000566159 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
UBE2I-212ENST00000566159 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
UBE2I-212ENST00000566159 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
UBE2I-212ENST00000566159 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
UBE2I-212ENST00000566159 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
UBE2I-212ENST00000566159 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
UBE2I-212ENST00000566159 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
UBE2I-212ENST00000566159 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
UBE2I-212ENST00000566159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
UBE2I-212ENST00000566159 EEA1Q15075 1411 aa24.27■■□□□ 1.48
UBE2I-212ENST00000566159 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
UBE2I-212ENST00000566159 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
UBE2I-212ENST00000566159 CFTRP13569 1480 aa24.24■■□□□ 1.47
UBE2I-212ENST00000566159 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
UBE2I-212ENST00000566159 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
UBE2I-212ENST00000566159 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
UBE2I-212ENST00000566159 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
UBE2I-212ENST00000566159 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
UBE2I-212ENST00000566159 CUX1P39880 1505 aa24.18■■□□□ 1.46
UBE2I-212ENST00000566159 RANGAP1P46060 587 aaPredicted RBP24.17■■□□□ 1.46
UBE2I-212ENST00000566159 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
UBE2I-212ENST00000566159 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.45
UBE2I-212ENST00000566159 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
UBE2I-212ENST00000566159 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
UBE2I-212ENST00000566159 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
UBE2I-212ENST00000566159 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
UBE2I-212ENST00000566159 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
UBE2I-212ENST00000566159 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
UBE2I-212ENST00000566159 KIF21BO75037 1637 aa24.02■■□□□ 1.44
UBE2I-212ENST00000566159 NESP48681 1621 aa24■■□□□ 1.43
UBE2I-212ENST00000566159 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
UBE2I-212ENST00000566159 CLIP1P30622 1438 aa23.92■■□□□ 1.42
UBE2I-212ENST00000566159 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
UBE2I-212ENST00000566159 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.41
UBE2I-212ENST00000566159 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
UBE2I-212ENST00000566159 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
UBE2I-212ENST00000566159 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
UBE2I-212ENST00000566159 CUX2O14529 1486 aa23.83■■□□□ 1.41
UBE2I-212ENST00000566159 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
UBE2I-212ENST00000566159 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
UBE2I-212ENST00000566159 IGF1RP08069 1367 aa23.7■■□□□ 1.39
UBE2I-212ENST00000566159 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
UBE2I-212ENST00000566159 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
UBE2I-212ENST00000566159 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
UBE2I-212ENST00000566159 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
UBE2I-212ENST00000566159 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
UBE2I-212ENST00000566159 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
UBE2I-212ENST00000566159 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
UBE2I-212ENST00000566159 APLP2Q06481 763 aa23.61■■□□□ 1.37
UBE2I-212ENST00000566159 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
UBE2I-212ENST00000566159 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
UBE2I-212ENST00000566159 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
UBE2I-212ENST00000566159 MYT1Q01538 1121 aa23.55■■□□□ 1.36
UBE2I-212ENST00000566159 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
UBE2I-212ENST00000566159 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
UBE2I-212ENST00000566159 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
UBE2I-212ENST00000566159 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
UBE2I-212ENST00000566159 MIER1Q8N108 512 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms